Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNU6-994P-201ENST00000410507 111 ntBASIC1.55□□□□□ -2.16
CCDC113Q9H0I3 AC002429.1-201ENST00000437672 148 ntBASIC1.55□□□□□ -2.16
CCDC113Q9H0I3 RNU7-79P-201ENST00000516082 62 ntBASIC1.55□□□□□ -2.16
CCDC113Q9H0I3 AC106800.4-201ENST00000614905 153 ntBASIC1.55□□□□□ -2.16
CCDC113Q9H0I3 AL662814.1-201ENST00000617364 121 ntBASIC1.55□□□□□ -2.16
CCDC113Q9H0I3 AC012676.2-201ENST00000619258 186 ntBASIC1.55□□□□□ -2.16
CCDC113Q9H0I3 RNA5SP205-201ENST00000364653 136 ntBASIC1.54□□□□□ -2.16
CCDC113Q9H0I3 RNU7-40P-201ENST00000516397 64 ntBASIC1.54□□□□□ -2.16
CCDC113Q9H0I3 MIR4421-201ENST00000578133 69 ntBASIC1.54□□□□□ -2.16
CCDC113Q9H0I3 AL670379.3-201ENST00000605040 251 ntBASIC1.54□□□□□ -2.16
CCDC113Q9H0I3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC113Q9H0I3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
CCDC113Q9H0I3 MIR548I2-201ENST00000408348 149 ntBASIC1.53□□□□□ -2.16
CCDC113Q9H0I3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC113Q9H0I3 AC141846.1-201ENST00000568348 142 ntBASIC1.53□□□□□ -2.16
CCDC113Q9H0I3 MTND5P34-201ENST00000568888 325 ntBASIC1.53□□□□□ -2.16
CCDC113Q9H0I3 RNU6-934P-201ENST00000365154 107 ntBASIC1.52□□□□□ -2.17
CCDC113Q9H0I3 Y_RNA.563-201ENST00000384707 108 ntBASIC1.52□□□□□ -2.17
CCDC113Q9H0I3 MIR548A1-201ENST00000385041 97 ntBASIC1.52□□□□□ -2.17
CCDC113Q9H0I3 MIR18B-201ENST00000454574 71 ntBASIC1.52□□□□□ -2.17
CCDC113Q9H0I3 AC067940.1-201ENST00000458411 300 ntBASIC1.52□□□□□ -2.17
CCDC113Q9H0I3 SNORD33.1-201ENST00000516213 88 ntBASIC1.52□□□□□ -2.17
CCDC113Q9H0I3 RNU7-35P-201ENST00000517174 62 ntBASIC1.52□□□□□ -2.17
CCDC113Q9H0I3 MIR563-201ENST00000385080 79 ntBASIC1.51□□□□□ -2.17
CCDC113Q9H0I3 MT-TI-201ENST00000387365 69 ntBASIC1.51□□□□□ -2.17
CCDC113Q9H0I3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.51□□□□□ -2.17
CCDC113Q9H0I3 SNORA4-201ENST00000584302 138 ntBASIC1.51□□□□□ -2.17
CCDC113Q9H0I3 AC027335.2-201ENST00000624030 375 ntBASIC1.51□□□□□ -2.17
CCDC113Q9H0I3 SNORA7.1-201ENST00000363750 139 ntBASIC1.5□□□□□ -2.17
CCDC113Q9H0I3 MT-TF-201ENST00000387314 71 ntBASIC1.5□□□□□ -2.17
CCDC113Q9H0I3 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
CCDC113Q9H0I3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
CCDC113Q9H0I3 MIR4781-201ENST00000585250 76 ntBASIC1.5□□□□□ -2.17
CCDC113Q9H0I3 FAM71BP1-201ENST00000604431 523 ntBASIC1.5□□□□□ -2.17
CCDC113Q9H0I3 RNU6-94P-201ENST00000607728 107 ntBASIC1.5□□□□□ -2.17
CCDC113Q9H0I3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC113Q9H0I3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC113Q9H0I3 Y_RNA.291-201ENST00000364886 113 ntBASIC1.49□□□□□ -2.17
CCDC113Q9H0I3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.49□□□□□ -2.17
CCDC113Q9H0I3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.49□□□□□ -2.17
CCDC113Q9H0I3 SNORD83.1-201ENST00000411362 77 ntBASIC1.49□□□□□ -2.17
CCDC113Q9H0I3 AC004223.1-201ENST00000479840 271 ntBASIC1.49□□□□□ -2.17
CCDC113Q9H0I3 RNU1-92P-201ENST00000517017 135 ntBASIC1.49□□□□□ -2.17
CCDC113Q9H0I3 AL589743.1-201ENST00000551932 2712 ntBASIC1.49□□□□□ -2.17
CCDC113Q9H0I3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 RNY1P13-201ENST00000365030 105 ntBASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 Y_RNA.353-201ENST00000365440 108 ntBASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 RNU6-1056P-201ENST00000383996 107 ntBASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 MIR548D2-201ENST00000384955 97 ntBASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 AC007012.1-201ENST00000567192 175 ntBASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 MIR3660-201ENST00000584845 100 ntBASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC113Q9H0I3 AC023934.1-201ENST00000574529 2389 ntBASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 MIR30D-201ENST00000362283 70 ntBASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 RNU6-949P-201ENST00000384040 107 ntBASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 RNU6-735P-201ENST00000410612 107 ntBASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 snoU13.21-201ENST00000459368 105 ntBASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 AL359821.1-201ENST00000605519 182 ntBASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 uc_338.6-201ENST00000613544 171 ntBASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 AC087741.2-201ENST00000619415 172 ntBASIC1.47□□□□□ -2.17
CCDC113Q9H0I3 MIR1-1-201ENST00000362147 71 ntBASIC1.46□□□□□ -2.18
CCDC113Q9H0I3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.46□□□□□ -2.18
CCDC113Q9H0I3 SNORD93-201ENST00000408813 74 ntBASIC1.46□□□□□ -2.18
CCDC113Q9H0I3 RNU6-321P-201ENST00000410912 106 ntBASIC1.46□□□□□ -2.18
CCDC113Q9H0I3 AC108729.3-201ENST00000513484 108 ntBASIC1.46□□□□□ -2.18
CCDC113Q9H0I3 MIR4771-2-201ENST00000577758 74 ntBASIC1.46□□□□□ -2.18
CCDC113Q9H0I3 MIR4771-1-201ENST00000582617 74 ntBASIC1.46□□□□□ -2.18
CCDC113Q9H0I3 RNU6-834P-201ENST00000362367 110 ntBASIC1.45□□□□□ -2.18
CCDC113Q9H0I3 RNU6-616P-201ENST00000384353 107 ntBASIC1.45□□□□□ -2.18
CCDC113Q9H0I3 SNORD116-21-201ENST00000384507 92 ntBASIC1.45□□□□□ -2.18
CCDC113Q9H0I3 RNU6-476P-201ENST00000384726 107 ntBASIC1.45□□□□□ -2.18
CCDC113Q9H0I3 MIR618-201ENST00000385287 98 ntBASIC1.45□□□□□ -2.18
CCDC113Q9H0I3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC113Q9H0I3 SNORD67.1-201ENST00000516618 108 ntBASIC1.45□□□□□ -2.18
CCDC113Q9H0I3 RNA5SP404-201ENST00000517118 132 ntBASIC1.45□□□□□ -2.18
CCDC113Q9H0I3 SNORD114-10-201ENST00000363409 72 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 RNU6-1144P-201ENST00000384247 104 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 MIR19B1-201ENST00000384829 87 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 MIR200A-201ENST00000384875 90 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 MIR100-201ENST00000385259 80 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 SNORA40.6-201ENST00000391153 128 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 MIR1257-201ENST00000408490 117 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 RPS26P5-201ENST00000418544 335 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 FABP5P4-201ENST00000437203 171 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
CCDC113Q9H0I3 Y_RNA.273-201ENST00000364703 102 ntBASIC1.43□□□□□ -2.18
CCDC113Q9H0I3 MIR942-201ENST00000401111 86 ntBASIC1.43□□□□□ -2.18
CCDC113Q9H0I3 RPS29P28-201ENST00000446439 141 ntBASIC1.43□□□□□ -2.18
CCDC113Q9H0I3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.43□□□□□ -2.18
CCDC113Q9H0I3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.43□□□□□ -2.18
CCDC113Q9H0I3 AC133485.1-201ENST00000567176 124 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms