Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 Y_RNA.609-201ENST00000410669 89 ntBASIC2.35□□□□□ -2.03
CNTNAP4Q9C0A0 snoU13.16-201ENST00000459350 104 ntBASIC2.35□□□□□ -2.03
CNTNAP4Q9C0A0 RNU7-34P-201ENST00000459394 64 ntBASIC2.35□□□□□ -2.03
CNTNAP4Q9C0A0 AC004223.1-201ENST00000479840 271 ntBASIC2.35□□□□□ -2.03
CNTNAP4Q9C0A0 MIR4439-201ENST00000583746 80 ntBASIC2.35□□□□□ -2.03
CNTNAP4Q9C0A0 AC020891.4-201ENST00000605745 93 ntBASIC2.35□□□□□ -2.03
CNTNAP4Q9C0A0 RNU6-86P-201ENST00000606534 107 ntBASIC2.35□□□□□ -2.03
CNTNAP4Q9C0A0 AL020996.3-201ENST00000606617 222 ntBASIC2.35□□□□□ -2.03
CNTNAP4Q9C0A0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CNTNAP4Q9C0A0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.34□□□□□ -2.03
CNTNAP4Q9C0A0 SNORA1.1-201ENST00000364671 133 ntBASIC2.34□□□□□ -2.04
CNTNAP4Q9C0A0 RNA5SP160-201ENST00000364866 120 ntBASIC2.34□□□□□ -2.04
CNTNAP4Q9C0A0 SNORA67.5-201ENST00000391036 107 ntBASIC2.34□□□□□ -2.04
CNTNAP4Q9C0A0 RNA5SP501-201ENST00000410990 112 ntBASIC2.34□□□□□ -2.04
CNTNAP4Q9C0A0 RNU6-523P-201ENST00000516304 54 ntBASIC2.34□□□□□ -2.04
CNTNAP4Q9C0A0 RNA5SP437-201ENST00000517249 129 ntBASIC2.34□□□□□ -2.04
CNTNAP4Q9C0A0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 Y_RNA.374-201ENST00000365606 101 ntBASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 RNU6-613P-201ENST00000410412 108 ntBASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 AC025033.1-201ENST00000463883 194 ntBASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 MIR4791-201ENST00000607666 84 ntBASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 AL512310.12-203ENST00000640543 90 ntBASIC2.33□□□□□ -2.04
CNTNAP4Q9C0A0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CNTNAP4Q9C0A0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CNTNAP4Q9C0A0 AC093850.1-201ENST00000454121 251 ntBASIC2.32□□□□□ -2.04
CNTNAP4Q9C0A0 RNU7-43P-201ENST00000516554 64 ntBASIC2.32□□□□□ -2.04
CNTNAP4Q9C0A0 SNORA74.3-201ENST00000517108 154 ntBASIC2.32□□□□□ -2.04
CNTNAP4Q9C0A0 MIR4303-201ENST00000581299 66 ntBASIC2.32□□□□□ -2.04
CNTNAP4Q9C0A0 AC096720.1-201ENST00000604441 183 ntBASIC2.32□□□□□ -2.04
CNTNAP4Q9C0A0 AC145423.2-201ENST00000610631 239 ntBASIC2.32□□□□□ -2.04
CNTNAP4Q9C0A0 MIR8081-201ENST00000611533 95 ntBASIC2.32□□□□□ -2.04
CNTNAP4Q9C0A0 RNU6-1190P-201ENST00000410811 104 ntBASIC2.31□□□□□ -2.04
CNTNAP4Q9C0A0 AC099513.1-201ENST00000490423 301 ntBASIC2.31□□□□□ -2.04
CNTNAP4Q9C0A0 MIR4446-201ENST00000578505 67 ntBASIC2.31□□□□□ -2.04
CNTNAP4Q9C0A0 MIR8055-201ENST00000610739 97 ntBASIC2.31□□□□□ -2.04
CNTNAP4Q9C0A0 Y_RNA.788-201ENST00000622394 112 ntBASIC2.31□□□□□ -2.04
CNTNAP4Q9C0A0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.31□□□□□ -2.04
CNTNAP4Q9C0A0 AC005336.3-201ENST00000623833 2679 ntBASIC2.31□□□□□ -2.04
CNTNAP4Q9C0A0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.3□□□□□ -2.04
CNTNAP4Q9C0A0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.3□□□□□ -2.04
CNTNAP4Q9C0A0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CNTNAP4Q9C0A0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CNTNAP4Q9C0A0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CNTNAP4Q9C0A0 SNORD114-26-201ENST00000363543 72 ntBASIC2.29□□□□□ -2.04
CNTNAP4Q9C0A0 RNU6-1244P-201ENST00000363614 108 ntBASIC2.29□□□□□ -2.04
CNTNAP4Q9C0A0 SNORA32-201ENST00000384072 121 ntBASIC2.29□□□□□ -2.04
CNTNAP4Q9C0A0 MIR526A1-201ENST00000384897 85 ntBASIC2.29□□□□□ -2.04
CNTNAP4Q9C0A0 RPL23AP6-201ENST00000446637 472 ntBASIC2.29□□□□□ -2.04
CNTNAP4Q9C0A0 AC140658.3-201ENST00000567603 271 ntBASIC2.29□□□□□ -2.04
CNTNAP4Q9C0A0 RNA5SP393-201ENST00000363423 117 ntBASIC2.28□□□□□ -2.04
CNTNAP4Q9C0A0 RNU6-913P-201ENST00000390913 95 ntBASIC2.28□□□□□ -2.04
CNTNAP4Q9C0A0 SNORD28B-201ENST00000390993 75 ntBASIC2.28□□□□□ -2.04
CNTNAP4Q9C0A0 SUMO1P4-201ENST00000429430 302 ntBASIC2.28□□□□□ -2.04
CNTNAP4Q9C0A0 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
CNTNAP4Q9C0A0 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
CNTNAP4Q9C0A0 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
CNTNAP4Q9C0A0 FAM106DP-201ENST00000586416 501 ntBASIC2.28□□□□□ -2.04
CNTNAP4Q9C0A0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-42P-201ENST00000384165 107 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 MIR34C-201ENST00000384831 77 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 RNA5SP100-201ENST00000410903 110 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 RNA5SP59-201ENST00000410922 110 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 RPL31P63-201ENST00000422565 375 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 BX248123.2-201ENST00000606318 124 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CNTNAP4Q9C0A0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-478P-201ENST00000363904 110 ntBASIC2.26□□□□□ -2.05
CNTNAP4Q9C0A0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CNTNAP4Q9C0A0 MIR1276-201ENST00000408707 83 ntBASIC2.26□□□□□ -2.05
CNTNAP4Q9C0A0 AC114801.3-201ENST00000510231 177 ntBASIC2.26□□□□□ -2.05
CNTNAP4Q9C0A0 MIR6504-201ENST00000613520 61 ntBASIC2.26□□□□□ -2.05
CNTNAP4Q9C0A0 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.26□□□□□ -2.05
CNTNAP4Q9C0A0 Z97988.1-201ENST00000637697 135 ntBASIC2.26□□□□□ -2.05
CNTNAP4Q9C0A0 AL161932.1-201ENST00000437408 146 ntBASIC2.25□□□□□ -2.05
CNTNAP4Q9C0A0 AC093729.1-201ENST00000513074 128 ntBASIC2.25□□□□□ -2.05
CNTNAP4Q9C0A0 RNU7-2P-201ENST00000516096 62 ntBASIC2.25□□□□□ -2.05
CNTNAP4Q9C0A0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CNTNAP4Q9C0A0 SNORD38.1-201ENST00000363863 68 ntBASIC2.24□□□□□ -2.05
CNTNAP4Q9C0A0 MIR206-201ENST00000384872 86 ntBASIC2.24□□□□□ -2.05
CNTNAP4Q9C0A0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CNTNAP4Q9C0A0 RNU7-153P-201ENST00000516455 62 ntBASIC2.24□□□□□ -2.05
CNTNAP4Q9C0A0 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
CNTNAP4Q9C0A0 SNORA31.25-201ENST00000517242 134 ntBASIC2.24□□□□□ -2.05
CNTNAP4Q9C0A0 MIR502-201ENST00000606349 86 ntBASIC2.24□□□□□ -2.05
CNTNAP4Q9C0A0 RMST_2.1-201ENST00000617263 136 ntBASIC2.24□□□□□ -2.05
CNTNAP4Q9C0A0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-342P-201ENST00000384521 104 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 MIR519C-201ENST00000385053 87 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 RNA5SP450-201ENST00000411206 102 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 RNU1-98P-201ENST00000458992 160 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 230.5 ms