Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC063976.4-201ENST00000421971 163 ntBASIC1.16□□□□□ -2.22
TRIM2Q9C040 AL606753.1-201ENST00000427435 87 ntBASIC1.16□□□□□ -2.22
TRIM2Q9C040 RNU7-90P-201ENST00000459216 62 ntBASIC1.16□□□□□ -2.22
TRIM2Q9C040 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
TRIM2Q9C040 MIR30D-201ENST00000362283 70 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 SNORD113.3-201ENST00000364630 78 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 SNORA25.9-201ENST00000365087 128 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 Y_RNA.528-201ENST00000384575 108 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 MIR499A-201ENST00000384903 122 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 SNORD12-201ENST00000391002 90 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 SNORA40.6-201ENST00000391153 128 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 RNU6-1165P-201ENST00000410119 107 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 RNU6-893P-201ENST00000458841 100 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 RPS23P4-201ENST00000487908 423 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 Y_RNA.712-201ENST00000517011 92 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 RNU6-789P-201ENST00000517105 102 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 AC025166.1-201ENST00000612411 163 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 AC106800.4-201ENST00000614905 153 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 U2.22-201ENST00000636441 106 ntBASIC1.15□□□□□ -2.23
TRIM2Q9C040 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
TRIM2Q9C040 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
TRIM2Q9C040 RNU6-22P-201ENST00000384355 107 ntBASIC1.14□□□□□ -2.23
TRIM2Q9C040 SNORD83.1-201ENST00000411362 77 ntBASIC1.14□□□□□ -2.23
TRIM2Q9C040 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
TRIM2Q9C040 AL662814.1-201ENST00000617364 121 ntBASIC1.14□□□□□ -2.23
TRIM2Q9C040 MIR3914-2-201ENST00000637339 95 ntBASIC1.14□□□□□ -2.23
TRIM2Q9C040 MTND5P18-201ENST00000445624 1801 ntBASIC1.14□□□□□ -2.23
TRIM2Q9C040 SNORD124-201ENST00000459577 104 ntBASIC1.13□□□□□ -2.23
TRIM2Q9C040 SNORD33.1-201ENST00000516213 88 ntBASIC1.13□□□□□ -2.23
TRIM2Q9C040 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
TRIM2Q9C040 AC141846.1-201ENST00000568348 142 ntBASIC1.13□□□□□ -2.23
TRIM2Q9C040 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
TRIM2Q9C040 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
TRIM2Q9C040 RNU6-1117P-201ENST00000384525 104 ntBASIC1.12□□□□□ -2.23
TRIM2Q9C040 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.12□□□□□ -2.23
TRIM2Q9C040 RNA5SP136-201ENST00000410906 107 ntBASIC1.12□□□□□ -2.23
TRIM2Q9C040 RNU7-35P-201ENST00000517174 62 ntBASIC1.12□□□□□ -2.23
TRIM2Q9C040 AC012676.2-201ENST00000619258 186 ntBASIC1.12□□□□□ -2.23
TRIM2Q9C040 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM2Q9C040 RNU6-369P-201ENST00000362515 102 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 Y_RNA.198-201ENST00000364013 98 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 RNY1P13-201ENST00000365030 105 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 MIR19B1-201ENST00000384829 87 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 SNORD111-201ENST00000408139 94 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 MIR1276-201ENST00000408707 83 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 RNA5SP237-201ENST00000410414 113 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 COX6CP6-201ENST00000490840 228 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 AL359881.1-201ENST00000602916 267 ntBASIC1.11□□□□□ -2.23
TRIM2Q9C040 RNU6-1168P-201ENST00000390831 104 ntBASIC1.1□□□□□ -2.23
TRIM2Q9C040 RNU4-69P-201ENST00000410677 143 ntBASIC1.1□□□□□ -2.23
TRIM2Q9C040 AC008267.6-201ENST00000441664 139 ntBASIC1.1□□□□□ -2.23
TRIM2Q9C040 RNU7-79P-201ENST00000516082 62 ntBASIC1.1□□□□□ -2.23
TRIM2Q9C040 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.1□□□□□ -2.23
TRIM2Q9C040 AC087741.2-201ENST00000619415 172 ntBASIC1.1□□□□□ -2.23
TRIM2Q9C040 AL589743.1-201ENST00000551932 2712 ntBASIC1.1□□□□□ -2.23
TRIM2Q9C040 Y_RNA.353-201ENST00000365440 108 ntBASIC1.09□□□□□ -2.23
TRIM2Q9C040 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.09□□□□□ -2.23
TRIM2Q9C040 RNU6-1086P-201ENST00000410930 100 ntBASIC1.09□□□□□ -2.23
TRIM2Q9C040 AC096949.1-201ENST00000412047 152 ntBASIC1.09□□□□□ -2.23
TRIM2Q9C040 RNU7-6P-201ENST00000516845 62 ntBASIC1.09□□□□□ -2.23
TRIM2Q9C040 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TRIM2Q9C040 RNU6-934P-201ENST00000365154 107 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 U8.15-201ENST00000390947 134 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 RNU6-1154P-201ENST00000391001 104 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 SNORD67.1-201ENST00000516618 108 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 RNA5SP102-201ENST00000516865 106 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 MIR4771-2-201ENST00000577758 74 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.08□□□□□ -2.24
TRIM2Q9C040 MIR4771-1-201ENST00000582617 74 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 AC020891.4-201ENST00000605745 93 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 Y_RNA.773-201ENST00000607168 90 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.08□□□□□ -2.24
TRIM2Q9C040 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRIM2Q9C040 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
TRIM2Q9C040 Y_RNA.213-201ENST00000364178 111 ntBASIC1.07□□□□□ -2.24
TRIM2Q9C040 RNU6-994P-201ENST00000410507 111 ntBASIC1.07□□□□□ -2.24
TRIM2Q9C040 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
TRIM2Q9C040 RNU6-479P-201ENST00000516348 105 ntBASIC1.07□□□□□ -2.24
TRIM2Q9C040 SNORA4-201ENST00000584302 138 ntBASIC1.07□□□□□ -2.24
TRIM2Q9C040 MIR6504-201ENST00000613520 61 ntBASIC1.07□□□□□ -2.24
TRIM2Q9C040 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
TRIM2Q9C040 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.07□□□□□ -2.24
TRIM2Q9C040 RNA5SP205-201ENST00000364653 136 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 Y_RNA.299-201ENST00000364973 94 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 Y_RNA.346-201ENST00000365385 112 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 RNU6-949P-201ENST00000384040 107 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 RNU6-616P-201ENST00000384353 107 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 Y_RNA.563-201ENST00000384707 108 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 RNU6-1307P-201ENST00000391012 103 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 MIR18B-201ENST00000454574 71 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 RNU6-62P-201ENST00000516526 102 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 MIR3163-201ENST00000581592 73 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 MIR1255B1-201ENST00000636325 63 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 AC023934.1-201ENST00000574529 2389 ntBASIC1.06□□□□□ -2.24
TRIM2Q9C040 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
TRIM2Q9C040 Y_RNA.344-201ENST00000365381 112 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 229.5 ms