Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIR3920-201ENST00000581751 86 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 RNU7-10P-201ENST00000607194 63 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 RNU1-141P-201ENST00000364623 158 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 MTND3P8-201ENST00000412909 339 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 AP000533.3-201ENST00000447704 118 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 RNU7-74P-201ENST00000459104 62 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 RNU6-506P-201ENST00000516553 94 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 AP000676.1-201ENST00000533307 52 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 uc_338.10-201ENST00000621872 182 ntBASIC-1.17□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 MIR539-201ENST00000365690 78 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 RNU6-24P-201ENST00000384440 107 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 MIR8485-201ENST00000401372 91 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 AC096644.2-201ENST00000429278 159 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 AC022137.1-201ENST00000483735 151 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 RNU6-764P-201ENST00000516396 105 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 MIR5197-201ENST00000583721 112 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 VN1R91P-201ENST00000594377 169 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 AC098479.1-201ENST00000609225 154 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 MIR8068-201ENST00000618032 68 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 MIR382-201ENST00000637119 76 ntBASIC-1.18□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 SNORD114-29-201ENST00000364819 70 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 RNU6-937P-201ENST00000384325 106 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 RNU2-16P-201ENST00000410712 136 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 MTND1P34-201ENST00000438556 671 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 AC097635.1-201ENST00000450678 155 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 RNU7-134P-201ENST00000458997 64 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 MIR5692C2-201ENST00000577959 77 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 MIR548AE1-201ENST00000583292 70 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 MIR3974-201ENST00000637126 96 ntBASIC-1.19□□□□□ -2.6
UPF3BQ9BZI7 RNA5SP192-201ENST00000364404 120 ntBASIC-1.2□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.2□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.2□□□□□ -2.6
UPF3BQ9BZI7 RNU6-429P-201ENST00000384582 108 ntBASIC-1.2□□□□□ -2.6
UPF3BQ9BZI7 MIR181A1-201ENST00000385026 110 ntBASIC-1.2□□□□□ -2.6
UPF3BQ9BZI7 RNU6-893P-201ENST00000458841 100 ntBASIC-1.2□□□□□ -2.6
UPF3BQ9BZI7 TRAJ51-201ENST00000504127 63 ntBASIC-1.2□□□□□ -2.6
UPF3BQ9BZI7 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.2□□□□□ -2.6
UPF3BQ9BZI7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.2□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 RNU6-484P-201ENST00000384016 107 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 RNU4-70P-201ENST00000384579 139 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 RNU6-310P-201ENST00000384655 107 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 MIR526A2-201ENST00000390198 65 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 MIR4441-201ENST00000582623 100 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 AC097639.2-201ENST00000603159 172 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 C8orf59P2-201ENST00000603441 271 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 AC069503.3-201ENST00000618674 145 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 AC078883.4-201ENST00000623218 367 ntBASIC-1.21□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.22□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.22□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.22□□□□□ -2.6
UPF3BQ9BZI7 RNU6-890P-201ENST00000384121 107 ntBASIC-1.22□□□□□ -2.6
UPF3BQ9BZI7 RNU2-55P-201ENST00000411146 174 ntBASIC-1.22□□□□□ -2.6
UPF3BQ9BZI7 SEPT14P8-201ENST00000508026 178 ntBASIC-1.22□□□□□ -2.6
UPF3BQ9BZI7 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.22□□□□□ -2.6
UPF3BQ9BZI7 RNA5SP153-201ENST00000516498 76 ntBASIC-1.22□□□□□ -2.6
UPF3BQ9BZI7 MIR5688-201ENST00000580619 83 ntBASIC-1.22□□□□□ -2.6
UPF3BQ9BZI7 RNY4P6-201ENST00000363667 96 ntBASIC-1.23□□□□□ -2.61
UPF3BQ9BZI7 RNU6-905P-201ENST00000384434 107 ntBASIC-1.23□□□□□ -2.61
UPF3BQ9BZI7 AC099799.1-201ENST00000439809 192 ntBASIC-1.23□□□□□ -2.61
UPF3BQ9BZI7 MTND5P40-201ENST00000559945 246 ntBASIC-1.23□□□□□ -2.61
UPF3BQ9BZI7 MIR4760-201ENST00000585040 80 ntBASIC-1.23□□□□□ -2.61
UPF3BQ9BZI7 AL121655.1-201ENST00000605811 308 ntBASIC-1.23□□□□□ -2.61
UPF3BQ9BZI7 SNORD113-5-201ENST00000607261 78 ntBASIC-1.23□□□□□ -2.61
UPF3BQ9BZI7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.23□□□□□ -2.61
UPF3BQ9BZI7 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 MIR518B-201ENST00000385127 83 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 RNU4-14P-201ENST00000410858 122 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 MRPS35P2-201ENST00000508242 191 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 RNU7-13P-201ENST00000516413 62 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 RNU7-137P-201ENST00000516788 62 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 RNU6-158P-201ENST00000517104 100 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 MIR3165-201ENST00000579874 75 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 AC145423.2-201ENST00000610631 239 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 AC048344.4-201ENST00000619744 527 ntBASIC-1.24□□□□□ -2.61
UPF3BQ9BZI7 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms