Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MIR588-201ENST00000384900 83 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 MIR563-201ENST00000385080 79 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 Y_RNA.580-201ENST00000391004 95 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 snoU13.2-201ENST00000459201 104 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 Y_RNA.651-201ENST00000459380 103 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 RNA5SP330-201ENST00000517096 96 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 MIR3646-201ENST00000578301 84 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 MIR4264-201ENST00000583520 66 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 AC020891.4-201ENST00000605745 93 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 AC021613.1-201ENST00000623880 111 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 AC021753.1-201ENST00000635724 168 ntBASIC0.54□□□□□ -2.32
RSPO3Q9BXY4 Y_RNA.171-201ENST00000363760 102 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 RNU6-151P-201ENST00000364158 107 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 Y_RNA.430-201ENST00000384081 110 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 Y_RNA.433-201ENST00000384089 102 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 Y_RNA.454-201ENST00000384224 113 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 MIR200A-201ENST00000384875 90 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 MT-TR-201ENST00000387439 65 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 SNORD89-201ENST00000390981 114 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 MIR942-201ENST00000401111 86 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 RPS3AP1-201ENST00000413190 320 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 RNU7-62P-201ENST00000458856 62 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 PDCD5P2-201ENST00000507570 312 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 RNA5SP255-201ENST00000516370 107 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 Y_RNA.757-201ENST00000578934 114 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 AP000753.3-201ENST00000604083 169 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 MIR8087-201ENST00000612745 78 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 AL109933.3-201ENST00000619095 188 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
RSPO3Q9BXY4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.53□□□□□ -2.33
RSPO3Q9BXY4 AC010332.2-201ENST00000613083 1904 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 MIR30D-201ENST00000362283 70 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.270-201ENST00000364693 104 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 RNU6-934P-201ENST00000365154 107 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 SNORD116-18-201ENST00000383961 92 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 MIR605-201ENST00000385078 83 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 SNORD37.2-201ENST00000391075 66 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 RNU6-460P-201ENST00000391158 108 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 RNA5SP272-201ENST00000516095 111 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 RNU6-255P-201ENST00000516957 105 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 AC112693.2-201ENST00000556538 232 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 AC098479.1-201ENST00000609225 154 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.778-201ENST00000620203 90 ntBASIC0.52□□□□□ -2.33
RSPO3Q9BXY4 SNORA22.1-201ENST00000362701 134 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.170-201ENST00000363746 110 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.180-201ENST00000363867 113 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 RNU6-449P-201ENST00000383914 107 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 RNY1P6-201ENST00000384193 109 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.470-201ENST00000384307 117 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.555-201ENST00000384673 110 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 MIR1827-201ENST00000408549 66 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 RNA5SP144-201ENST00000410846 116 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 AC096949.1-201ENST00000412047 152 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 RPS26P5-201ENST00000418544 335 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 AL512326.2-201ENST00000426359 151 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 AC113410.1-201ENST00000505029 247 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 RNU2-35P-201ENST00000516446 142 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 AC108081.1-201ENST00000604358 221 ntBASIC0.51□□□□□ -2.33
RSPO3Q9BXY4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 AC023934.1-201ENST00000574529 2389 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 RNA5SP257-201ENST00000363023 116 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 SNORA20-201ENST00000384662 132 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.584-201ENST00000391090 114 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 MIR548I1-201ENST00000408810 149 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 U7.7-201ENST00000459276 60 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 MIR1270-201ENST00000459320 83 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 RNU6-240P-201ENST00000516098 97 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 RNU7-70P-201ENST00000516941 66 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 MIR4771-2-201ENST00000577758 74 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 MIR3152-201ENST00000579801 74 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 MIR4771-1-201ENST00000582617 74 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.5□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.120-201ENST00000363304 110 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 MIR569-201ENST00000385228 96 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 RNU6-994P-201ENST00000410507 111 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 FABP5P4-201ENST00000437203 171 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 RNU7-56P-201ENST00000458744 62 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 RNU6-346P-201ENST00000516288 111 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.690-201ENST00000516603 95 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 IGKV1-22-201ENST00000524313 326 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 MIR3121-201ENST00000579680 77 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 MIR4676-201ENST00000583078 72 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms