Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
NPAS1Q99742 SNORD114-27-201ENST00000363766 70 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 RNU6-746P-201ENST00000384112 109 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 Y_RNA.470-201ENST00000384307 117 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 MT-TF-201ENST00000387314 71 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 MIR759-201ENST00000390224 91 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 MIR1263-201ENST00000408324 86 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 MTND4LP9-201ENST00000427694 174 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
NPAS1Q99742 RNU7-123P-201ENST00000515911 60 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 AC141846.1-201ENST00000568348 142 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 SNORA4-201ENST00000584302 138 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 AL589743.1-201ENST00000551932 2712 ntBASIC0.98□□□□□ -2.25
NPAS1Q99742 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
NPAS1Q99742 Y_RNA.4-201ENST00000362333 112 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 RNU6-235P-201ENST00000362644 107 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 RNU6-364P-201ENST00000384387 107 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 MIR520F-201ENST00000384824 87 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.97□□□□□ -2.25
NPAS1Q99742 RPS23P4-201ENST00000487908 423 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 RNU7-79P-201ENST00000516082 62 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 RNU6-1110P-201ENST00000516462 101 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 RNU6-1061P-201ENST00000516530 99 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 RNY4P20-201ENST00000516678 93 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 AC025627.3-201ENST00000582078 182 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
NPAS1Q99742 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.97□□□□□ -2.25
NPAS1Q99742 MIR96-201ENST00000362288 78 ntBASIC0.96□□□□□ -2.26
NPAS1Q99742 Y_RNA.164-201ENST00000363709 102 ntBASIC0.96□□□□□ -2.26
NPAS1Q99742 MIR539-201ENST00000365690 78 ntBASIC0.96□□□□□ -2.26
NPAS1Q99742 MIR1827-201ENST00000408549 66 ntBASIC0.96□□□□□ -2.26
NPAS1Q99742 RNU6-257P-201ENST00000410238 98 ntBASIC0.96□□□□□ -2.26
NPAS1Q99742 AL158147.1-201ENST00000443970 75 ntBASIC0.96□□□□□ -2.26
NPAS1Q99742 RNU7-185P-201ENST00000459215 60 ntBASIC0.96□□□□□ -2.26
NPAS1Q99742 RN7SKP19-201ENST00000516016 252 ntBASIC0.96□□□□□ -2.26
NPAS1Q99742 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
NPAS1Q99742 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
NPAS1Q99742 MIR30D-201ENST00000362283 70 ntBASIC0.95□□□□□ -2.26
NPAS1Q99742 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
NPAS1Q99742 Y_RNA.299-201ENST00000364973 94 ntBASIC0.95□□□□□ -2.26
NPAS1Q99742 MIR563-201ENST00000385080 79 ntBASIC0.95□□□□□ -2.26
NPAS1Q99742 MIR4676-201ENST00000583078 72 ntBASIC0.95□□□□□ -2.26
NPAS1Q99742 MIR548AE2-201ENST00000583456 67 ntBASIC0.95□□□□□ -2.26
NPAS1Q99742 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
NPAS1Q99742 SNORD115-2-201ENST00000362842 82 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 RNU6-403P-201ENST00000363163 104 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 SNORD115-20-201ENST00000365099 82 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 MIR613-201ENST00000385248 95 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 SNORD77B-201ENST00000391112 67 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 MIR938-201ENST00000401216 83 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 RNA5SP255-201ENST00000516370 107 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 RNU7-156P-201ENST00000517214 74 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 AC020891.4-201ENST00000605745 93 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
NPAS1Q99742 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
NPAS1Q99742 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-187P-201ENST00000384139 106 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 SNORD105-201ENST00000386910 85 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-447P-201ENST00000410293 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-1118P-201ENST00000410382 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-1076P-201ENST00000410397 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-355P-201ENST00000410427 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-791P-201ENST00000410467 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-705P-201ENST00000410601 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU4-69P-201ENST00000410677 143 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-1100P-201ENST00000410691 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-860P-201ENST00000410860 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-1217P-201ENST00000411276 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 RNU6-785P-201ENST00000411324 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 U6.90-201ENST00000614007 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 U6.70-201ENST00000620287 104 ntBASIC0.93□□□□□ -2.26
NPAS1Q99742 SNORA72.6-201ENST00000384520 129 ntBASIC0.92□□□□□ -2.26
NPAS1Q99742 MIR520H-201ENST00000385126 88 ntBASIC0.92□□□□□ -2.26
NPAS1Q99742 MIR125B2-201ENST00000385128 89 ntBASIC0.92□□□□□ -2.26
NPAS1Q99742 RNU1-119P-201ENST00000391122 165 ntBASIC0.92□□□□□ -2.26
NPAS1Q99742 RNU4-83P-201ENST00000410863 133 ntBASIC0.92□□□□□ -2.26
NPAS1Q99742 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
NPAS1Q99742 RNU6-971P-201ENST00000516920 106 ntBASIC0.92□□□□□ -2.26
NPAS1Q99742 AC022523.2-201ENST00000561045 150 ntBASIC0.92□□□□□ -2.26
NPAS1Q99742 RNY1P10-201ENST00000363268 113 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 Y_RNA.213-201ENST00000364178 111 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 RNY1P13-201ENST00000365030 105 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 RNU6-949P-201ENST00000384040 107 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 Y_RNA.586-201ENST00000391146 98 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 RNU7-6P-201ENST00000516845 62 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 RNU7-35P-201ENST00000517174 62 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 MIR4804-201ENST00000581683 73 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 MIR8070-201ENST00000616510 88 ntBASIC0.91□□□□□ -2.26
NPAS1Q99742 RNU6-1335P-201ENST00000365426 107 ntBASIC0.9□□□□□ -2.27
NPAS1Q99742 Y_RNA.528-201ENST00000384575 108 ntBASIC0.9□□□□□ -2.27
NPAS1Q99742 U8.15-201ENST00000390947 134 ntBASIC0.9□□□□□ -2.27
NPAS1Q99742 SNORD99-201ENST00000408612 74 ntBASIC0.9□□□□□ -2.27
NPAS1Q99742 RNA5SP136-201ENST00000410906 107 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms