Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-649P-201ENST00000384463 107 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 RNU7-79P-201ENST00000516082 62 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 AC022616.4-201ENST00000522985 181 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 SNORA27.1-201ENST00000362604 124 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 RNU6-651P-201ENST00000411040 105 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 AL353193.1-201ENST00000421444 268 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 AL137792.2-201ENST00000443484 235 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 AC108729.2-201ENST00000476543 840 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.68□□□□□ -2.68
COL12A1Q99715 DEFB108A-201ENST00000530110 222 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.68□□□□□ -2.68
COL12A1Q99715 AL607023.1-201ENST00000620045 248 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 U2.18-201ENST00000622185 84 ntBASIC-1.68□□□□□ -2.68
COL12A1Q99715 SNORA27.2-201ENST00000363365 126 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.69□□□□□ -2.68
COL12A1Q99715 AL021921.1-201ENST00000442774 93 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 AC018710.1-201ENST00000506509 158 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 AC141846.1-201ENST00000568348 142 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 AL157392.4-201ENST00000609756 345 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 RNU6-117P-201ENST00000365415 107 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 MIR519A1-201ENST00000385257 85 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 SNORD63B-201ENST00000411005 70 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 AC107399.1-201ENST00000451226 265 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 AC079140.5-201ENST00000507882 310 ntBASIC-1.69□□□□□ -2.68
COL12A1Q99715 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 RNU6-108P-201ENST00000365558 107 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 SNORA27-201ENST00000384323 126 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 RNU6-310P-201ENST00000384655 107 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 RNU2-62P-201ENST00000410868 191 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 MTND2P6-201ENST00000455337 1030 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 RNU7-24P-201ENST00000458867 62 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 RNU6-523P-201ENST00000516304 54 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 RNA5SP147-201ENST00000516493 109 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 AC144568.1-201ENST00000520139 137 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 MTATP6P15-201ENST00000527233 835 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 MIR3684-201ENST00000579779 74 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 AL021707.8-201ENST00000609428 183 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
COL12A1Q99715 MIR4500-201ENST00000579472 76 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 MIR6717-201ENST00000622747 73 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 RNY1P12-201ENST00000364251 105 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 MIR203A-201ENST00000384836 110 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 MIR579-201ENST00000385221 98 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 RNU2-38P-201ENST00000410856 79 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 AC068137.4-201ENST00000638485 296 ntBASIC-1.7□□□□□ -2.68
COL12A1Q99715 MIR302B-201ENST00000362188 73 ntBASIC-1.71□□□□□ -2.68
COL12A1Q99715 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.71□□□□□ -2.68
COL12A1Q99715 MTND1P5-201ENST00000517906 940 ntBASIC-1.71□□□□□ -2.68
COL12A1Q99715 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.71□□□□□ -2.68
COL12A1Q99715 AC084781.2-201ENST00000615568 161 ntBASIC-1.71□□□□□ -2.68
COL12A1Q99715 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.71□□□□□ -2.68
COL12A1Q99715 RNU6-340P-201ENST00000364005 107 ntBASIC-1.71□□□□□ -2.68
COL12A1Q99715 AC174048.1-201ENST00000603389 144 ntBASIC-1.71□□□□□ -2.68
COL12A1Q99715 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.72□□□□□ -2.68
COL12A1Q99715 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.72□□□□□ -2.68
COL12A1Q99715 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.72□□□□□ -2.68
COL12A1Q99715 RNA5SP54-201ENST00000516951 92 ntBASIC-1.72□□□□□ -2.68
COL12A1Q99715 AL022161.1-201ENST00000604390 213 ntBASIC-1.72□□□□□ -2.68
COL12A1Q99715 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.72□□□□□ -2.68
COL12A1Q99715 RNU6-643P-201ENST00000384018 107 ntBASIC-1.72□□□□□ -2.68
COL12A1Q99715 RNU7-195P-201ENST00000458793 62 ntBASIC-1.72□□□□□ -2.68
COL12A1Q99715 VN1R91P-201ENST00000594377 169 ntBASIC-1.72□□□□□ -2.69
COL12A1Q99715 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.72□□□□□ -2.69
COL12A1Q99715 JPX_2.1-201ENST00000614161 69 ntBASIC-1.72□□□□□ -2.69
COL12A1Q99715 RNU6-597P-201ENST00000365620 102 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 SNORA20.2-201ENST00000383922 131 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 MIR122-201ENST00000385044 85 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 SNORA26.6-201ENST00000391256 115 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 AL606534.2-204ENST00000635008 178 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 RNU6-371P-201ENST00000364283 108 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 SNORD90-201ENST00000391145 111 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 AC004467.1-201ENST00000615678 330 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 MIR548AH-201ENST00000637109 76 ntBASIC-1.73□□□□□ -2.69
COL12A1Q99715 RNU6-247P-201ENST00000362636 107 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 MTND2P18-201ENST00000419962 1030 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 U6.81-201ENST00000612550 106 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 AP000720.1-201ENST00000625091 483 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 SNORA20-201ENST00000384662 132 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 RNA5SP494-201ENST00000410653 129 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 MIR1322-201ENST00000638013 71 ntBASIC-1.74□□□□□ -2.69
COL12A1Q99715 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.75□□□□□ -2.69
COL12A1Q99715 RNU6-361P-201ENST00000364454 107 ntBASIC-1.75□□□□□ -2.69
COL12A1Q99715 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.75□□□□□ -2.69
COL12A1Q99715 MIR124-1-201ENST00000385275 85 ntBASIC-1.75□□□□□ -2.69
COL12A1Q99715 AL033528.1-201ENST00000453780 140 ntBASIC-1.75□□□□□ -2.69
COL12A1Q99715 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms