Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MIR30D-201ENST00000362283 70 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.170-201ENST00000363746 110 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.400-201ENST00000383963 111 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 MT-TR-201ENST00000387439 65 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 SNORD89-201ENST00000390981 114 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 AL603914.1-201ENST00000401964 204 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 RPS26P5-201ENST00000418544 335 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 AC067940.1-201ENST00000458411 300 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 RNU6-240P-201ENST00000516098 97 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.690-201ENST00000516603 95 ntBASIC0.92□□□□□ -2.26
SIN3AQ96ST3 RNU6-690P-201ENST00000365242 106 ntBASIC0.91□□□□□ -2.26
SIN3AQ96ST3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
SIN3AQ96ST3 U7.7-201ENST00000459276 60 ntBASIC0.91□□□□□ -2.26
SIN3AQ96ST3 SNORA25.12-201ENST00000516202 82 ntBASIC0.91□□□□□ -2.26
SIN3AQ96ST3 RNU6-255P-201ENST00000516957 105 ntBASIC0.91□□□□□ -2.26
SIN3AQ96ST3 MIR548X2-201ENST00000579776 100 ntBASIC0.91□□□□□ -2.26
SIN3AQ96ST3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.91□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.215-201ENST00000364204 112 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 MIR569-201ENST00000385228 96 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 MIR513C-201ENST00000401352 84 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 MIR18B-201ENST00000454574 71 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 AC133485.1-201ENST00000567176 124 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 AC138907.6-201ENST00000568401 126 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 MIR4771-2-201ENST00000577758 74 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 MIR4771-1-201ENST00000582617 74 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 AC020891.4-201ENST00000605745 93 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 AL662814.1-201ENST00000617364 121 ntBASIC0.9□□□□□ -2.27
SIN3AQ96ST3 MIR1-1-201ENST00000362147 71 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 RNU6-915P-201ENST00000364943 103 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 RNU1-36P-201ENST00000365130 165 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 SNORD18B-201ENST00000365659 72 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 RNU6-342P-201ENST00000384521 104 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 RNU6-893P-201ENST00000458841 100 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 AC113410.1-201ENST00000505029 247 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 RNU7-200P-201ENST00000516105 62 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 RNU2-35P-201ENST00000516446 142 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 MIR4305-201ENST00000583252 102 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 MIR6515-201ENST00000619843 57 ntBASIC0.89□□□□□ -2.27
SIN3AQ96ST3 RNU6-209P-201ENST00000384118 107 ntBASIC0.88□□□□□ -2.27
SIN3AQ96ST3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.88□□□□□ -2.27
SIN3AQ96ST3 MIR100-201ENST00000385259 80 ntBASIC0.88□□□□□ -2.27
SIN3AQ96ST3 MT-TF-201ENST00000387314 71 ntBASIC0.88□□□□□ -2.27
SIN3AQ96ST3 AC133485.4-201ENST00000561835 220 ntBASIC0.88□□□□□ -2.27
SIN3AQ96ST3 AC138907.4-201ENST00000570107 226 ntBASIC0.88□□□□□ -2.27
SIN3AQ96ST3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.88□□□□□ -2.27
SIN3AQ96ST3 AL590095.2-201ENST00000604136 117 ntBASIC0.88□□□□□ -2.27
SIN3AQ96ST3 AC108081.1-201ENST00000604358 221 ntBASIC0.88□□□□□ -2.27
SIN3AQ96ST3 SNORA18-201ENST00000384416 132 ntBASIC0.87□□□□□ -2.27
SIN3AQ96ST3 AL022718.1-201ENST00000412004 84 ntBASIC0.87□□□□□ -2.27
SIN3AQ96ST3 AL512326.2-201ENST00000426359 151 ntBASIC0.87□□□□□ -2.27
SIN3AQ96ST3 AC141846.1-201ENST00000568348 142 ntBASIC0.87□□□□□ -2.27
SIN3AQ96ST3 MIR3121-201ENST00000579680 77 ntBASIC0.87□□□□□ -2.27
SIN3AQ96ST3 MIR4676-201ENST00000583078 72 ntBASIC0.87□□□□□ -2.27
SIN3AQ96ST3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.87□□□□□ -2.27
SIN3AQ96ST3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.87□□□□□ -2.27
SIN3AQ96ST3 AC023934.1-201ENST00000574529 2389 ntBASIC0.87□□□□□ -2.27
SIN3AQ96ST3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
SIN3AQ96ST3 Y_RNA.366-201ENST00000365540 102 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 Y_RNA.420-201ENST00000384043 110 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 Y_RNA.506-201ENST00000384494 102 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 RNA5SP237-201ENST00000410414 113 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 RNU7-185P-201ENST00000459215 60 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 RNU7-113P-201ENST00000459273 62 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.86□□□□□ -2.27
SIN3AQ96ST3 MIR4804-201ENST00000581683 73 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 AL136317.1-201ENST00000612653 226 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 AP001340.1-201ENST00000624405 217 ntBASIC0.86□□□□□ -2.27
SIN3AQ96ST3 SNORD115-2-201ENST00000362842 82 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 SNORD115-20-201ENST00000365099 82 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 MIR605-201ENST00000385078 83 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 SNORD105-201ENST00000386910 85 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 AC098934.3-201ENST00000430450 190 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 RNA5SP272-201ENST00000516095 111 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 RNU6-426P-201ENST00000516464 97 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 AC025627.3-201ENST00000582078 182 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 AC021443.1-201ENST00000604478 211 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 AL353765.1-201ENST00000605514 183 ntBASIC0.85□□□□□ -2.27
SIN3AQ96ST3 HSBP1P2-201ENST00000299671 229 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 Y_RNA.488-201ENST00000384403 102 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 MIR613-201ENST00000385248 95 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.84□□□□□ -2.27
SIN3AQ96ST3 RNU7-164P-201ENST00000459221 62 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 RNU7-123P-201ENST00000515911 60 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 RNU6-977P-201ENST00000516411 103 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 AP001328.1-201ENST00000528550 176 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
SIN3AQ96ST3 RNY1P13-201ENST00000365030 105 ntBASIC0.83□□□□□ -2.28
SIN3AQ96ST3 RNY1P5-201ENST00000383890 115 ntBASIC0.83□□□□□ -2.28
SIN3AQ96ST3 Y_RNA.531-201ENST00000384589 121 ntBASIC0.83□□□□□ -2.28
SIN3AQ96ST3 MIR520F-201ENST00000384824 87 ntBASIC0.83□□□□□ -2.28
SIN3AQ96ST3 MIR125B2-201ENST00000385128 89 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms