Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
ZNF558Q96NG5 Y_RNA.75-201ENST00000362927 97 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 Y_RNA.85-201ENST00000363014 111 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 SNORA25.7-201ENST00000364375 127 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 MIR1197-201ENST00000408818 88 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 RNU4-83P-201ENST00000410863 133 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 RNU6-1023P-201ENST00000516137 106 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 AP003327.1-201ENST00000529684 127 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 MRPS18CP4-201ENST00000535821 231 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 AC141846.1-201ENST00000568348 142 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 MIR3128-201ENST00000581957 66 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 MIR4719-201ENST00000585233 84 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 U4.1-201ENST00000620349 87 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
ZNF558Q96NG5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
ZNF558Q96NG5 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
ZNF558Q96NG5 Y_RNA.515-201ENST00000384535 112 ntBASIC0.41□□□□□ -2.34
ZNF558Q96NG5 RNA5SP117-201ENST00000365294 118 ntBASIC0.4□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.412-201ENST00000384001 104 ntBASIC0.4□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.435-201ENST00000384095 112 ntBASIC0.4□□□□□ -2.35
ZNF558Q96NG5 U8.15-201ENST00000390947 134 ntBASIC0.4□□□□□ -2.35
ZNF558Q96NG5 RPL39P25-201ENST00000449384 154 ntBASIC0.4□□□□□ -2.35
ZNF558Q96NG5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.4□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.680-201ENST00000516441 93 ntBASIC0.4□□□□□ -2.35
ZNF558Q96NG5 RNA5SP94-201ENST00000516917 108 ntBASIC0.4□□□□□ -2.35
ZNF558Q96NG5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
ZNF558Q96NG5 RNA5SP517-201ENST00000364724 117 ntBASIC0.39□□□□□ -2.35
ZNF558Q96NG5 RNU6-949P-201ENST00000384040 107 ntBASIC0.39□□□□□ -2.35
ZNF558Q96NG5 RNU6-679P-201ENST00000391003 106 ntBASIC0.39□□□□□ -2.35
ZNF558Q96NG5 AC096949.1-201ENST00000412047 152 ntBASIC0.39□□□□□ -2.35
ZNF558Q96NG5 AL118496.2-201ENST00000448300 230 ntBASIC0.39□□□□□ -2.35
ZNF558Q96NG5 U6.106-201ENST00000636360 105 ntBASIC0.39□□□□□ -2.35
ZNF558Q96NG5 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.60-201ENST00000362831 98 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 RNU6-918P-201ENST00000391219 106 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.588-201ENST00000391254 102 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 RNU5E-9P-201ENST00000411164 104 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 MTND3P2-201ENST00000438452 342 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 RNU6-765P-201ENST00000516916 99 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 MIR3678-201ENST00000578455 94 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 MIR4514-201ENST00000581410 57 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 MIR6082-201ENST00000613604 109 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 uc_338.16-201ENST00000621804 95 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 MTND5P32-201ENST00000560711 1802 ntBASIC0.38□□□□□ -2.35
ZNF558Q96NG5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
ZNF558Q96NG5 SNORA20.1-201ENST00000364790 130 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 RNU6-702P-201ENST00000364982 107 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.447-201ENST00000384184 113 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 RNY1P6-201ENST00000384193 109 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 RNU6-1086P-201ENST00000410930 100 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 SNORA40.8-201ENST00000411034 126 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 RNU6-111P-201ENST00000517179 105 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.757-201ENST00000578934 114 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 MIR4431-201ENST00000579990 94 ntBASIC0.37□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.13-201ENST00000362403 112 ntBASIC0.36□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.193-201ENST00000363979 102 ntBASIC0.36□□□□□ -2.35
ZNF558Q96NG5 SNORA18-201ENST00000384416 132 ntBASIC0.36□□□□□ -2.35
ZNF558Q96NG5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.36□□□□□ -2.35
ZNF558Q96NG5 RNA5SP257-201ENST00000363023 116 ntBASIC0.35□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.251-201ENST00000364551 99 ntBASIC0.35□□□□□ -2.35
ZNF558Q96NG5 RNU4-16P-201ENST00000364737 141 ntBASIC0.35□□□□□ -2.35
ZNF558Q96NG5 Y_RNA.452-201ENST00000384202 108 ntBASIC0.35□□□□□ -2.35
ZNF558Q96NG5 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
ZNF558Q96NG5 SNORA25.12-201ENST00000516202 82 ntBASIC0.35□□□□□ -2.35
ZNF558Q96NG5 MIR4491-201ENST00000581087 68 ntBASIC0.35□□□□□ -2.35
ZNF558Q96NG5 MIR4503-201ENST00000582187 83 ntBASIC0.35□□□□□ -2.35
ZNF558Q96NG5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.35□□□□□ -2.35
ZNF558Q96NG5 MIR411-201ENST00000362239 96 ntBASIC0.34□□□□□ -2.36
ZNF558Q96NG5 Y_RNA.52-201ENST00000362760 96 ntBASIC0.34□□□□□ -2.36
ZNF558Q96NG5 RNU6-403P-201ENST00000363163 104 ntBASIC0.34□□□□□ -2.36
ZNF558Q96NG5 SNORD118-201ENST00000363593 134 ntBASIC0.34□□□□□ -2.36
ZNF558Q96NG5 RNY1P13-201ENST00000365030 105 ntBASIC0.34□□□□□ -2.36
ZNF558Q96NG5 Y_RNA.521-201ENST00000384560 114 ntBASIC0.34□□□□□ -2.36
ZNF558Q96NG5 RNA5SP144-201ENST00000410846 116 ntBASIC0.34□□□□□ -2.36
ZNF558Q96NG5 Y_RNA.617-201ENST00000410920 90 ntBASIC0.34□□□□□ -2.36
ZNF558Q96NG5 RNU6-1258P-201ENST00000516911 111 ntBASIC0.34□□□□□ -2.36
ZNF558Q96NG5 RNU6-349P-201ENST00000362402 107 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 Y_RNA.200-201ENST00000364018 102 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 Y_RNA.307-201ENST00000365022 117 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 RNU6-196P-201ENST00000384315 107 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 SNORA8.2-201ENST00000384372 139 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 RNA5SP236-201ENST00000516169 116 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 AC133485.4-201ENST00000561835 220 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.33□□□□□ -2.36
ZNF558Q96NG5 SNORD44.1-201ENST00000363202 61 ntBASIC0.32□□□□□ -2.36
ZNF558Q96NG5 Y_RNA.174-201ENST00000363781 105 ntBASIC0.32□□□□□ -2.36
ZNF558Q96NG5 RNU6-312P-201ENST00000364629 107 ntBASIC0.32□□□□□ -2.36
ZNF558Q96NG5 MIR3149-201ENST00000584629 83 ntBASIC0.32□□□□□ -2.36
ZNF558Q96NG5 SNORD115-2-201ENST00000362842 82 ntBASIC0.31□□□□□ -2.36
ZNF558Q96NG5 Y_RNA.83-201ENST00000363005 113 ntBASIC0.31□□□□□ -2.36
ZNF558Q96NG5 Y_RNA.171-201ENST00000363760 102 ntBASIC0.31□□□□□ -2.36
ZNF558Q96NG5 SNORD115-20-201ENST00000365099 82 ntBASIC0.31□□□□□ -2.36
ZNF558Q96NG5 RNU6-1336P-201ENST00000383886 109 ntBASIC0.31□□□□□ -2.36
ZNF558Q96NG5 RNU6-768P-201ENST00000384683 107 ntBASIC0.31□□□□□ -2.36
ZNF558Q96NG5 Y_RNA.567-201ENST00000384736 106 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms