Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 MIR4491-201ENST00000581087 68 ntBASIC0.33□□□□□ -2.36
LINC00477Q96M19 AL359881.1-201ENST00000602916 267 ntBASIC0.33□□□□□ -2.36
LINC00477Q96M19 MIR6788-201ENST00000618842 66 ntBASIC0.33□□□□□ -2.36
LINC00477Q96M19 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.33□□□□□ -2.36
LINC00477Q96M19 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
LINC00477Q96M19 RNU6-682P-201ENST00000363843 106 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 Y_RNA.233-201ENST00000364407 101 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 Y_RNA.297-201ENST00000364950 91 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 Y_RNA.366-201ENST00000365540 102 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 Y_RNA.393-201ENST00000383936 102 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 SNORA32-201ENST00000384072 121 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 Y_RNA.435-201ENST00000384095 112 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 RNU6-42P-201ENST00000384165 107 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 RNU6-364P-201ENST00000384387 107 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 RNU7-80P-201ENST00000459562 61 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 RNU6-138P-201ENST00000515952 107 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 Y_RNA.686-201ENST00000516548 134 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 RNU6-861P-201ENST00000516745 106 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 AC133485.4-201ENST00000561835 220 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 SNORA4-201ENST00000584302 138 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 SNORA25.18-201ENST00000607153 114 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 AL136317.1-201ENST00000612653 226 ntBASIC0.32□□□□□ -2.36
LINC00477Q96M19 RNU6-1020P-201ENST00000363684 107 ntBASIC0.31□□□□□ -2.36
LINC00477Q96M19 RNA5SP245-201ENST00000364239 121 ntBASIC0.31□□□□□ -2.36
LINC00477Q96M19 MT-TF-201ENST00000387314 71 ntBASIC0.31□□□□□ -2.36
LINC00477Q96M19 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
LINC00477Q96M19 RNU6-1307P-201ENST00000391012 103 ntBASIC0.31□□□□□ -2.36
LINC00477Q96M19 RNU4-83P-201ENST00000410863 133 ntBASIC0.31□□□□□ -2.36
LINC00477Q96M19 RNA5SP94-201ENST00000516917 108 ntBASIC0.31□□□□□ -2.36
LINC00477Q96M19 AC022523.2-201ENST00000561045 150 ntBASIC0.31□□□□□ -2.36
LINC00477Q96M19 MIR3678-201ENST00000578455 94 ntBASIC0.31□□□□□ -2.36
LINC00477Q96M19 RNU6-403P-201ENST00000363163 104 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 RNU6-309P-201ENST00000364573 106 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 SNORA50A-201ENST00000384225 134 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 Y_RNA.521-201ENST00000384560 114 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 Y_RNA.644-201ENST00000459006 113 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 RNU6-240P-201ENST00000516098 97 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 RN7SKP12-201ENST00000516275 143 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 Y_RNA.674-201ENST00000516362 113 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 RNU6-1271P-201ENST00000517049 105 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 RNU6-1223P-201ENST00000517124 104 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 MIR5000-201ENST00000577717 103 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 MIR548AE2-201ENST00000583456 67 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 AC108081.1-201ENST00000604358 221 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.3□□□□□ -2.36
LINC00477Q96M19 Y_RNA.120-201ENST00000363304 110 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 SNORA25.7-201ENST00000364375 127 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 Y_RNA.251-201ENST00000364551 99 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-949P-201ENST00000384040 107 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNY1P6-201ENST00000384193 109 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 Y_RNA.454-201ENST00000384224 113 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-291P-201ENST00000384720 107 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-447P-201ENST00000410293 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-1118P-201ENST00000410382 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-1076P-201ENST00000410397 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-355P-201ENST00000410427 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-791P-201ENST00000410467 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-705P-201ENST00000410601 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-1100P-201ENST00000410691 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-860P-201ENST00000410860 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-1217P-201ENST00000411276 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-785P-201ENST00000411324 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 AC108059.2-201ENST00000434626 151 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU7-79P-201ENST00000516082 62 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 SNORA31.14-201ENST00000516728 116 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 RNU6-448P-201ENST00000517052 107 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 MIR6082-201ENST00000613604 109 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 U6.90-201ENST00000614007 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 U6.70-201ENST00000620287 104 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 uc_338.16-201ENST00000621804 95 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 MIR5087-201ENST00000635826 76 ntBASIC0.29□□□□□ -2.36
LINC00477Q96M19 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.29□□□□□ -2.36
LINC00477Q96M19 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 Y_RNA.116-201ENST00000363292 103 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 SNORA63.5-201ENST00000363548 123 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 RNU4-84P-201ENST00000364200 139 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 RNU6-1130P-201ENST00000365434 107 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 SNORA72.6-201ENST00000384520 129 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 RNU6-1104P-201ENST00000384723 104 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 MIR518E-201ENST00000385252 88 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 RNA5SP237-201ENST00000410414 113 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 RNU7-121P-201ENST00000516604 62 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 RNU7-35P-201ENST00000517174 62 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 IGKV1-22-201ENST00000524313 326 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 AC105081.1-201ENST00000617727 106 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 AC243829.3-201ENST00000622177 108 ntBASIC0.28□□□□□ -2.36
LINC00477Q96M19 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
LINC00477Q96M19 Y_RNA.188-201ENST00000363952 111 ntBASIC0.27□□□□□ -2.37
LINC00477Q96M19 MT-TI-201ENST00000387365 69 ntBASIC0.27□□□□□ -2.37
LINC00477Q96M19 RNU6-1135P-201ENST00000411083 103 ntBASIC0.27□□□□□ -2.37
LINC00477Q96M19 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
LINC00477Q96M19 SNORD67.1-201ENST00000516618 108 ntBASIC0.27□□□□□ -2.37
LINC00477Q96M19 RNU6-531P-201ENST00000516694 104 ntBASIC0.27□□□□□ -2.37
LINC00477Q96M19 AP002392.1-201ENST00000537692 208 ntBASIC0.27□□□□□ -2.37
LINC00477Q96M19 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms