Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RNU6-170P-201ENST00000362832 104 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 RNU6-207P-201ENST00000384137 107 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 CYCSP46-201ENST00000423569 204 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 AC144568.1-201ENST00000520139 137 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 MIR5188-201ENST00000583467 113 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 AL589826.1-201ENST00000340697 249 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 MTCYBP36-201ENST00000404146 440 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 AC098826.2-201ENST00000452011 651 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 RNU7-80P-201ENST00000459562 61 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 RNU6-90P-201ENST00000606352 106 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 U2.17-201ENST00000611454 95 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 AC004467.1-201ENST00000615678 330 ntBASIC-1.55□□□□□ -2.66
SPG11Q96JI7 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 MIR1284-201ENST00000408337 120 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 MTND4LP7-201ENST00000431728 294 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 RNU6-893P-201ENST00000458841 100 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 RNU7-116P-201ENST00000516940 62 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 AC022616.6-201ENST00000520479 119 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 AL512360.1-201ENST00000555346 234 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 AC084782.3-201ENST00000612282 578 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 MIR6841-201ENST00000637129 72 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 RNU6-664P-201ENST00000362381 107 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 RNU6-243P-201ENST00000391140 107 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.56□□□□□ -2.66
SPG11Q96JI7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.56□□□□□ -2.66
SPG11Q96JI7 AC024909.2-201ENST00000553035 286 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 MTATP6P24-201ENST00000576835 677 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 MIR5692C1-201ENST00000585309 91 ntBASIC-1.56□□□□□ -2.66
SPG11Q96JI7 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 MIR519A2-201ENST00000384990 87 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 MIR548Q-201ENST00000408404 100 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 RNU6-719P-201ENST00000516671 104 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 MIR5583-1-201ENST00000580941 59 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 MIR4775-201ENST00000581168 75 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 AC018638.8-201ENST00000588755 281 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.57□□□□□ -2.66
SPG11Q96JI7 SNORD50.1-201ENST00000362987 71 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 AC104850.1-201ENST00000435940 476 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.58□□□□□ -2.66
SPG11Q96JI7 SNORA19.2-201ENST00000516013 114 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 RNU7-115P-201ENST00000516433 55 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 RNU6-236P-201ENST00000363886 106 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 SNORD115-22-201ENST00000364456 82 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 AL118558.2-201ENST00000556294 238 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 AC005014.3-201ENST00000605985 190 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.58□□□□□ -2.66
SPG11Q96JI7 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 MIR1-2-201ENST00000384961 85 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 RNU6-189P-201ENST00000516120 101 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 U7.5-201ENST00000517224 61 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.59□□□□□ -2.66
SPG11Q96JI7 AL021707.8-201ENST00000609428 183 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 SEPT14P19-203ENST00000633205 211 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 MIR5683-201ENST00000636514 76 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 RNU6-495P-201ENST00000362995 107 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 RNY4P9-201ENST00000363194 97 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 RNY4P10-201ENST00000365571 96 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 MIR451A-201ENST00000385059 72 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 MRPL42P2-201ENST00000403169 426 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 Z83846.1-201ENST00000446798 265 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 RNU7-48P-201ENST00000458875 63 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.59□□□□□ -2.66
SPG11Q96JI7 AC022878.1-201ENST00000530684 149 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 MIR5696-201ENST00000578474 85 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 AC092794.2-201ENST00000620933 563 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 AC021613.1-201ENST00000623880 111 ntBASIC-1.59□□□□□ -2.66
SPG11Q96JI7 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms