Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTP4Q96DX8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTP4Q96DX8 Y_RNA.81-201ENST00000362997 102 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 RNU6-44P-201ENST00000384045 107 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 SNORA32-201ENST00000384072 121 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 SNORD116-21-201ENST00000384507 92 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 RNA5SP95-201ENST00000410319 137 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 RNA5SP261-201ENST00000410536 106 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 RNA5SP33-201ENST00000516687 98 ntBASIC1.2□□□□□ -2.22
RTP4Q96DX8 SNORD115-2-201ENST00000362842 82 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 RNA5SP264-201ENST00000363115 107 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 Y_RNA.213-201ENST00000364178 111 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 SNORD115-20-201ENST00000365099 82 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 Y_RNA.344-201ENST00000365381 112 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 RNU6-880P-201ENST00000384526 107 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 RNY4P18-201ENST00000391107 89 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 RNU6-955P-201ENST00000410497 104 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 AL035461.1-201ENST00000421490 332 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 RPL39P39-201ENST00000455840 151 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 RNU1-98P-201ENST00000458992 160 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 RPL30P7-201ENST00000479312 323 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 RNU7-6P-201ENST00000516845 62 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 Y_RNA.709-201ENST00000516952 92 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 AC007012.1-201ENST00000567192 175 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 SNORA4-201ENST00000584302 138 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 Y_RNA.773-201ENST00000607168 90 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 uc_338.6-201ENST00000613544 171 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 AC087741.2-201ENST00000619415 172 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 MIR6516-201ENST00000630554 81 ntBASIC1.19□□□□□ -2.22
RTP4Q96DX8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
RTP4Q96DX8 MIR96-201ENST00000362288 78 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 SNORD114-22-201ENST00000365423 72 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 RNU6-1237P-201ENST00000384777 107 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 AC063976.4-201ENST00000421971 163 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 AC245047.7-201ENST00000440265 293 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 RNU6-893P-201ENST00000458841 100 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 RN7SKP88-201ENST00000516847 250 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 7SK.8-201ENST00000612110 250 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 7SK.11-201ENST00000615477 250 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 7SK.13-201ENST00000622040 250 ntBASIC1.18□□□□□ -2.22
RTP4Q96DX8 MIR103A2-201ENST00000362154 78 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 SNORA63.4-201ENST00000362763 126 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 Y_RNA.362-201ENST00000365518 110 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 SNORA18-201ENST00000384416 132 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 SNORD38B-201ENST00000384690 67 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 RNU6-205P-201ENST00000390858 107 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.17□□□□□ -2.22
RTP4Q96DX8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.17□□□□□ -2.22
RTP4Q96DX8 snoU13.18-201ENST00000459483 104 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 SNORA31.2-201ENST00000516019 134 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 SNORD38B-202ENST00000625943 69 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 MIR1255B1-201ENST00000636325 63 ntBASIC1.17□□□□□ -2.22
RTP4Q96DX8 AL161722.3-201ENST00000605789 2983 ntBASIC1.16□□□□□ -2.22
RTP4Q96DX8 Y_RNA.281-201ENST00000364774 94 ntBASIC1.16□□□□□ -2.22
RTP4Q96DX8 MIR489-201ENST00000384923 84 ntBASIC1.16□□□□□ -2.22
RTP4Q96DX8 MIR548D2-201ENST00000384955 97 ntBASIC1.16□□□□□ -2.22
RTP4Q96DX8 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
RTP4Q96DX8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.16□□□□□ -2.22
RTP4Q96DX8 MIR4679-2-201ENST00000578358 77 ntBASIC1.16□□□□□ -2.22
RTP4Q96DX8 MIR3163-201ENST00000581592 73 ntBASIC1.16□□□□□ -2.22
RTP4Q96DX8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.16□□□□□ -2.22
RTP4Q96DX8 MIR6740-201ENST00000618268 113 ntBASIC1.16□□□□□ -2.22
RTP4Q96DX8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RTP4Q96DX8 SNORA63.5-201ENST00000363548 123 ntBASIC1.15□□□□□ -2.23
RTP4Q96DX8 RNY4P6-201ENST00000363667 96 ntBASIC1.15□□□□□ -2.23
RTP4Q96DX8 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
RTP4Q96DX8 MIR759-201ENST00000390224 91 ntBASIC1.15□□□□□ -2.23
RTP4Q96DX8 SNORA75.2-201ENST00000391138 150 ntBASIC1.15□□□□□ -2.23
RTP4Q96DX8 SNORA75.3-201ENST00000391231 150 ntBASIC1.15□□□□□ -2.23
RTP4Q96DX8 RNU4-69P-201ENST00000410677 143 ntBASIC1.15□□□□□ -2.23
RTP4Q96DX8 MTATP6P29-201ENST00000415057 132 ntBASIC1.15□□□□□ -2.23
RTP4Q96DX8 RNU6-755P-201ENST00000364400 103 ntBASIC1.14□□□□□ -2.23
RTP4Q96DX8 Y_RNA.299-201ENST00000364973 94 ntBASIC1.14□□□□□ -2.23
RTP4Q96DX8 RNU6-396P-201ENST00000365369 105 ntBASIC1.14□□□□□ -2.23
RTP4Q96DX8 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
RTP4Q96DX8 RNU6-616P-201ENST00000384353 107 ntBASIC1.14□□□□□ -2.23
RTP4Q96DX8 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
RTP4Q96DX8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.14□□□□□ -2.23
RTP4Q96DX8 MIR588-201ENST00000384900 83 ntBASIC1.13□□□□□ -2.23
RTP4Q96DX8 RNU6-1307P-201ENST00000391012 103 ntBASIC1.13□□□□□ -2.23
RTP4Q96DX8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.13□□□□□ -2.23
RTP4Q96DX8 snoU13.2-201ENST00000459201 104 ntBASIC1.13□□□□□ -2.23
RTP4Q96DX8 snoU13.21-201ENST00000459368 105 ntBASIC1.13□□□□□ -2.23
RTP4Q96DX8 RNU7-35P-201ENST00000517174 62 ntBASIC1.13□□□□□ -2.23
RTP4Q96DX8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RTP4Q96DX8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RTP4Q96DX8 Y_RNA.85-201ENST00000363014 111 ntBASIC1.12□□□□□ -2.23
RTP4Q96DX8 SNORD115-19-201ENST00000363098 82 ntBASIC1.12□□□□□ -2.23
RTP4Q96DX8 SNORD115-18-201ENST00000363293 82 ntBASIC1.12□□□□□ -2.23
RTP4Q96DX8 SNORD114-27-201ENST00000363766 70 ntBASIC1.12□□□□□ -2.23
RTP4Q96DX8 SNORD115-17-201ENST00000364612 82 ntBASIC1.12□□□□□ -2.23
RTP4Q96DX8 RNU1-93P-201ENST00000364704 169 ntBASIC1.12□□□□□ -2.23
RTP4Q96DX8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.12□□□□□ -2.23
RTP4Q96DX8 Y_RNA.354-201ENST00000365448 111 ntBASIC1.12□□□□□ -2.23
RTP4Q96DX8 RNU6-910P-201ENST00000390844 107 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms