Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 RNU6-662P-201ENST00000384253 104 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 RNU6-429P-201ENST00000384582 108 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 MIR9-2-201ENST00000384838 87 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 MIR181B2-201ENST00000385004 89 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 MT-TT-201ENST00000387460 66 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 SNORA53-201ENST00000391141 249 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 RNU6-559P-201ENST00000516151 98 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 RNA5SP395-201ENST00000516567 118 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 SCARNA15-202ENST00000516881 127 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 SNORD116.3-201ENST00000517176 78 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 MIR548AE1-201ENST00000583292 70 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 AL365205.2-201ENST00000594586 68 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 AC006006.1-201ENST00000603082 144 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 AC084782.3-201ENST00000612282 578 ntBASIC-0.83□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 SNORA32-201ENST00000384072 121 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 AC093423.1-201ENST00000440817 142 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 AC040926.1-201ENST00000530195 238 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 MTND5P40-201ENST00000559945 246 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 MIR548AG2-201ENST00000581228 64 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 AC108676.2-201ENST00000605225 163 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 AC084781.2-201ENST00000615568 161 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 AL606534.2-204ENST00000635008 178 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 MTND4LP32-201ENST00000636111 270 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 AC093726.3-201ENST00000637588 150 ntBASIC-0.84□□□□□ -2.54
LRRC39Q96DD0 SNORD81.2-201ENST00000365153 76 ntBASIC-0.85□□□□□ -2.55
LRRC39Q96DD0 MIR635-201ENST00000384830 98 ntBASIC-0.85□□□□□ -2.55
LRRC39Q96DD0 RNA5SP144-201ENST00000410846 116 ntBASIC-0.85□□□□□ -2.55
LRRC39Q96DD0 SNORA20.3-201ENST00000516880 132 ntBASIC-0.85□□□□□ -2.55
LRRC39Q96DD0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.85□□□□□ -2.55
LRRC39Q96DD0 RNU7-10P-201ENST00000607194 63 ntBASIC-0.85□□□□□ -2.55
LRRC39Q96DD0 snoU18.1-201ENST00000629629 71 ntBASIC-0.85□□□□□ -2.55
LRRC39Q96DD0 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 RNU4-90P-201ENST00000362773 141 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 RNU6-47P-201ENST00000383866 107 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 AL731563.1-201ENST00000442202 214 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 RNU6-893P-201ENST00000458841 100 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 RNU7-13P-201ENST00000516413 62 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 AC006504.6-201ENST00000590142 199 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 AC113139.1-201ENST00000605049 239 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 MIR376A1-201ENST00000616574 68 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 AL138825.1-201ENST00000618587 192 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 AC069503.3-201ENST00000618674 145 ntBASIC-0.86□□□□□ -2.55
LRRC39Q96DD0 SNORD115-2-201ENST00000362842 82 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 SNORD114-10-201ENST00000363409 72 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 RNA5SP368-201ENST00000364298 116 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 SNORD115-20-201ENST00000365099 82 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 RNY3P5-201ENST00000384127 102 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 RNU4-70P-201ENST00000384579 139 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 SNORD56B-201ENST00000384713 71 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 MIR519A1-201ENST00000385257 85 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 RNY4P36-201ENST00000391116 96 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 SNORD75.1-201ENST00000408373 60 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 MTND4P19-201ENST00000446659 478 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 MIR1270-201ENST00000459320 83 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 AC092794.1-201ENST00000612734 582 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 AC025253.1-201ENST00000613623 543 ntBASIC-0.87□□□□□ -2.55
LRRC39Q96DD0 SNORD114-29-201ENST00000364819 70 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 RNU1-115P-201ENST00000365329 160 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 MIR519E-201ENST00000385075 84 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 SNORD115-46-201ENST00000390982 71 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 RNU7-74P-201ENST00000459104 62 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 AC082651.2-201ENST00000496833 166 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 RNA5SP33-201ENST00000516687 98 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 RNU6-453P-201ENST00000516819 85 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 YWHAEP2-201ENST00000580066 112 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 MIR548AE2-201ENST00000583456 67 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 uc_338.10-201ENST00000621872 182 ntBASIC-0.88□□□□□ -2.55
LRRC39Q96DD0 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 SNORD116-2-201ENST00000384274 95 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 SNORD116-6-201ENST00000384711 96 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 MIR224-201ENST00000384889 81 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 AL606845.1-201ENST00000404881 255 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 RNU7-195P-201ENST00000458793 62 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 RNU7-113P-201ENST00000459273 62 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 RNU7-70P-201ENST00000516941 66 ntBASIC-0.89□□□□□ -2.55
LRRC39Q96DD0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms