Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 Y_RNA.350-201ENST00000365409 98 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 RNU6-949P-201ENST00000384040 107 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 Y_RNA.478-201ENST00000384358 107 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 SNORA8.2-201ENST00000384372 139 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 SNORA18-201ENST00000384416 132 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 RNU4-70P-201ENST00000384579 139 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 MIR1302-3-201ENST00000408128 138 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 RNU6-327P-201ENST00000516270 127 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 MRPS18CP4-201ENST00000535821 231 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 AC133485.4-201ENST00000561835 220 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 MIR1273G-201ENST00000577677 100 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 MIR6082-201ENST00000613604 109 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 MIR6779-201ENST00000617283 64 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
LHX4Q969G2 RNU6-403P-201ENST00000363163 104 ntBASIC0.27□□□□□ -2.37
LHX4Q969G2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.27□□□□□ -2.37
LHX4Q969G2 SNORA25.7-201ENST00000364375 127 ntBASIC0.27□□□□□ -2.37
LHX4Q969G2 Y_RNA.515-201ENST00000384535 112 ntBASIC0.27□□□□□ -2.37
LHX4Q969G2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.27□□□□□ -2.37
LHX4Q969G2 RNU6-893P-201ENST00000458841 100 ntBASIC0.27□□□□□ -2.37
LHX4Q969G2 RNU6-765P-201ENST00000516916 99 ntBASIC0.27□□□□□ -2.37
LHX4Q969G2 SNORA25.18-201ENST00000607153 114 ntBASIC0.27□□□□□ -2.37
LHX4Q969G2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
LHX4Q969G2 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 SNORD118-201ENST00000363593 134 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 Y_RNA.412-201ENST00000384001 104 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 RNU4-71P-201ENST00000516258 113 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 AC022523.2-201ENST00000561045 150 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 Y_RNA.757-201ENST00000578934 114 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 MIR4491-201ENST00000581087 68 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 MTND5P32-201ENST00000560711 1802 ntBASIC0.26□□□□□ -2.37
LHX4Q969G2 Y_RNA.75-201ENST00000362927 97 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 RNY1P13-201ENST00000365030 105 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 RNY1P6-201ENST00000384193 109 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 RNU5E-9P-201ENST00000411164 104 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 RNU6-469P-201ENST00000516253 101 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 Y_RNA.680-201ENST00000516441 93 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 RNU6-1258P-201ENST00000516911 111 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 MIR3128-201ENST00000581957 66 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 AC062037.2-201ENST00000610137 73 ntBASIC0.25□□□□□ -2.37
LHX4Q969G2 Y_RNA.32-201ENST00000362589 110 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 SNORA36.1-201ENST00000363424 132 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 RNU6-1336P-201ENST00000383886 109 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 SNORA72.6-201ENST00000384520 129 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 MIR644A-201ENST00000385262 94 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 RNU6-1086P-201ENST00000410930 100 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 AL512326.2-201ENST00000426359 151 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 SNRPGP12-201ENST00000449481 213 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.24□□□□□ -2.37
LHX4Q969G2 U6.106-201ENST00000636360 105 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 MIR924-201ENST00000638017 53 ntBASIC0.24□□□□□ -2.37
LHX4Q969G2 Y_RNA.52-201ENST00000362760 96 ntBASIC0.23□□□□□ -2.37
LHX4Q969G2 Y_RNA.60-201ENST00000362831 98 ntBASIC0.23□□□□□ -2.37
LHX4Q969G2 RNA5SP144-201ENST00000410846 116 ntBASIC0.23□□□□□ -2.37
LHX4Q969G2 AL118496.2-201ENST00000448300 230 ntBASIC0.23□□□□□ -2.37
LHX4Q969G2 RNU6-1023P-201ENST00000516137 106 ntBASIC0.23□□□□□ -2.37
LHX4Q969G2 RNU6-1045P-201ENST00000516321 107 ntBASIC0.23□□□□□ -2.37
LHX4Q969G2 SCARNA15.1-201ENST00000516384 125 ntBASIC0.23□□□□□ -2.37
LHX4Q969G2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.23□□□□□ -2.37
LHX4Q969G2 MIR330-201ENST00000362196 94 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 RNU6-349P-201ENST00000362402 107 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 Y_RNA.171-201ENST00000363760 102 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 Y_RNA.174-201ENST00000363781 105 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 Y_RNA.435-201ENST00000384095 112 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 Y_RNA.521-201ENST00000384560 114 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 RNU6-918P-201ENST00000391219 106 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 SNORA31.14-201ENST00000516728 116 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 RNU6-111P-201ENST00000517179 105 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 MIR4431-201ENST00000579990 94 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.22□□□□□ -2.37
LHX4Q969G2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 AC078938.1-201ENST00000620993 318 ntBASIC0.22□□□□□ -2.37
LHX4Q969G2 Y_RNA.162-201ENST00000363683 102 ntBASIC0.21□□□□□ -2.38
LHX4Q969G2 RNU6-291P-201ENST00000384720 107 ntBASIC0.21□□□□□ -2.38
LHX4Q969G2 RNA5SP236-201ENST00000516169 116 ntBASIC0.21□□□□□ -2.38
LHX4Q969G2 SNORA25.16-201ENST00000516741 121 ntBASIC0.21□□□□□ -2.38
LHX4Q969G2 MIR4514-201ENST00000581410 57 ntBASIC0.21□□□□□ -2.38
LHX4Q969G2 U4.1-201ENST00000620349 87 ntBASIC0.21□□□□□ -2.38
LHX4Q969G2 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 Y_RNA.470-201ENST00000384307 117 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 Y_RNA.536-201ENST00000384621 113 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.2□□□□□ -2.38
LHX4Q969G2 RNU6-863P-201ENST00000515989 104 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 RNU7-79P-201ENST00000516082 62 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 RNU6-135P-201ENST00000516769 101 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 RNU7-35P-201ENST00000517174 62 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 MIR8087-201ENST00000612745 78 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.2□□□□□ -2.38
LHX4Q969G2 MIR411-201ENST00000362239 96 ntBASIC0.19□□□□□ -2.38
LHX4Q969G2 SNORA20.1-201ENST00000364790 130 ntBASIC0.19□□□□□ -2.38
LHX4Q969G2 Y_RNA.447-201ENST00000384184 113 ntBASIC0.19□□□□□ -2.38
LHX4Q969G2 RNU6-768P-201ENST00000384683 107 ntBASIC0.19□□□□□ -2.38
LHX4Q969G2 AL022718.1-201ENST00000412004 84 ntBASIC0.19□□□□□ -2.38
LHX4Q969G2 MTND3P2-201ENST00000438452 342 ntBASIC0.19□□□□□ -2.38
LHX4Q969G2 RNU7-113P-201ENST00000459273 62 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms