Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNU6-554P-201ENST00000410466 106 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.39□□□□□ -2.19
ATP2A3Q93084 AC004812.1-201ENST00000540773 146 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 MIR548AO-201ENST00000579992 96 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 AL096861.1-201ENST00000610899 123 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 MIR4251-201ENST00000635819 61 ntBASIC1.39□□□□□ -2.19
ATP2A3Q93084 MIR302B-201ENST00000362188 73 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 MIR450A1-201ENST00000362262 91 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 Y_RNA.85-201ENST00000363014 111 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 RNU6-106P-201ENST00000384405 107 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 RNU6-1319P-201ENST00000390855 104 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 RNU6-747P-201ENST00000390928 104 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 RNU6-241P-201ENST00000391148 104 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 RNU6-177P-201ENST00000411257 104 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 RNU7-73P-201ENST00000458743 63 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 AL133373.1-201ENST00000497098 94 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 RNU7-53P-201ENST00000516705 60 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 RMST_2.1-201ENST00000617263 136 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 MIR6717-201ENST00000622747 73 ntBASIC1.38□□□□□ -2.19
ATP2A3Q93084 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
ATP2A3Q93084 SNORA22.1-201ENST00000362701 134 ntBASIC1.37□□□□□ -2.19
ATP2A3Q93084 SNORA63.5-201ENST00000363548 123 ntBASIC1.37□□□□□ -2.19
ATP2A3Q93084 RNU6-1107P-201ENST00000364817 104 ntBASIC1.37□□□□□ -2.19
ATP2A3Q93084 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.37□□□□□ -2.19
ATP2A3Q93084 RPS23P4-201ENST00000487908 423 ntBASIC1.37□□□□□ -2.19
ATP2A3Q93084 RNU6-165P-201ENST00000517170 99 ntBASIC1.37□□□□□ -2.19
ATP2A3Q93084 MIR3613-201ENST00000579844 87 ntBASIC1.37□□□□□ -2.19
ATP2A3Q93084 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.37□□□□□ -2.19
ATP2A3Q93084 Y_RNA.773-201ENST00000607168 90 ntBASIC1.37□□□□□ -2.19
ATP2A3Q93084 MIR8055-201ENST00000610739 97 ntBASIC1.37□□□□□ -2.19
ATP2A3Q93084 AC087741.2-201ENST00000619415 172 ntBASIC1.37□□□□□ -2.19
ATP2A3Q93084 Y_RNA.213-201ENST00000364178 111 ntBASIC1.36□□□□□ -2.19
ATP2A3Q93084 Y_RNA.531-201ENST00000384589 121 ntBASIC1.36□□□□□ -2.19
ATP2A3Q93084 MIR548D2-201ENST00000384955 97 ntBASIC1.36□□□□□ -2.19
ATP2A3Q93084 MIR1302-7-201ENST00000408841 72 ntBASIC1.36□□□□□ -2.19
ATP2A3Q93084 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.36□□□□□ -2.19
ATP2A3Q93084 RNU7-40P-201ENST00000516397 64 ntBASIC1.36□□□□□ -2.19
ATP2A3Q93084 RNA5SP102-201ENST00000516865 106 ntBASIC1.36□□□□□ -2.19
ATP2A3Q93084 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
ATP2A3Q93084 MIR1255B1-201ENST00000636325 63 ntBASIC1.36□□□□□ -2.19
ATP2A3Q93084 SNORA1.1-201ENST00000364671 133 ntBASIC1.35□□□□□ -2.19
ATP2A3Q93084 RNU6-342P-201ENST00000384521 104 ntBASIC1.35□□□□□ -2.19
ATP2A3Q93084 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
ATP2A3Q93084 SNORA19.1-201ENST00000410656 129 ntBASIC1.35□□□□□ -2.19
ATP2A3Q93084 snoU13.16-201ENST00000459350 104 ntBASIC1.35□□□□□ -2.19
ATP2A3Q93084 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
ATP2A3Q93084 MIR548AE2-201ENST00000583456 67 ntBASIC1.35□□□□□ -2.19
ATP2A3Q93084 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
ATP2A3Q93084 RNU6-1298P-201ENST00000362456 101 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 SNORD114-26-201ENST00000363543 72 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 RNU6-53P-201ENST00000365367 106 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 RNU6-602P-201ENST00000411155 105 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 AL022718.1-201ENST00000412004 84 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 AL353813.1-201ENST00000440700 253 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 RPL39P34-201ENST00000477141 156 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 RNU7-6P-201ENST00000516845 62 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 MIR4679-2-201ENST00000578358 77 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 MIR6515-201ENST00000619843 57 ntBASIC1.34□□□□□ -2.19
ATP2A3Q93084 SNORA25.3-201ENST00000363205 127 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 U8.6-201ENST00000364939 135 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 SNORD114-22-201ENST00000365423 72 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 SNORA32-201ENST00000384072 121 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 Y_RNA.430-201ENST00000384081 110 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 Y_RNA.540-201ENST00000384638 111 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 RNU6-1054P-201ENST00000411293 104 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 RNU7-113P-201ENST00000459273 62 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 AC113410.1-201ENST00000505029 247 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 MIR3163-201ENST00000581592 73 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 Z97988.1-201ENST00000637697 135 ntBASIC1.33□□□□□ -2.2
ATP2A3Q93084 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ATP2A3Q93084 RNA5SP325-201ENST00000363756 130 ntBASIC1.32□□□□□ -2.2
ATP2A3Q93084 RNU6-1014P-201ENST00000383940 103 ntBASIC1.32□□□□□ -2.2
ATP2A3Q93084 RNU6-1307P-201ENST00000391012 103 ntBASIC1.32□□□□□ -2.2
ATP2A3Q93084 RNA5SP89-201ENST00000410300 108 ntBASIC1.32□□□□□ -2.2
ATP2A3Q93084 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
ATP2A3Q93084 SNORA31.2-201ENST00000516019 134 ntBASIC1.32□□□□□ -2.2
ATP2A3Q93084 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ATP2A3Q93084 Y_RNA.36-201ENST00000362602 112 ntBASIC1.31□□□□□ -2.2
ATP2A3Q93084 SNORD115-2-201ENST00000362842 82 ntBASIC1.31□□□□□ -2.2
ATP2A3Q93084 Y_RNA.163-201ENST00000363702 113 ntBASIC1.31□□□□□ -2.2
ATP2A3Q93084 SNORD115-20-201ENST00000365099 82 ntBASIC1.31□□□□□ -2.2
ATP2A3Q93084 Y_RNA.323-201ENST00000365157 109 ntBASIC1.31□□□□□ -2.2
ATP2A3Q93084 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
ATP2A3Q93084 AC048334.1-201ENST00000477975 159 ntBASIC1.31□□□□□ -2.2
ATP2A3Q93084 RNA5SP33-201ENST00000516687 98 ntBASIC1.31□□□□□ -2.2
ATP2A3Q93084 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.31□□□□□ -2.2
ATP2A3Q93084 MIR103A2-201ENST00000362154 78 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 SNORD115-19-201ENST00000363098 82 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 RNA5SP264-201ENST00000363115 107 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 SNORD115-18-201ENST00000363293 82 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 RNY4P6-201ENST00000363667 96 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 SNORD115-17-201ENST00000364612 82 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 Y_RNA.328-201ENST00000365208 113 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 RNU6-616P-201ENST00000384353 107 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms