Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-1229P-201ENST00000364295 107 ntBASIC2.06□□□□□ -2.08
SH3RF3Q8TEJ3 SNORD115-27-201ENST00000364430 82 ntBASIC2.06□□□□□ -2.08
SH3RF3Q8TEJ3 Y_RNA.355-201ENST00000365462 98 ntBASIC2.06□□□□□ -2.08
SH3RF3Q8TEJ3 SNORD77B-201ENST00000391112 67 ntBASIC2.06□□□□□ -2.08
SH3RF3Q8TEJ3 MIR889-201ENST00000401280 79 ntBASIC2.06□□□□□ -2.08
SH3RF3Q8TEJ3 Y_RNA.607-201ENST00000410597 98 ntBASIC2.06□□□□□ -2.08
SH3RF3Q8TEJ3 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-23P-201ENST00000363283 107 ntBASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 SNORA32-201ENST00000384072 121 ntBASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-788P-201ENST00000390967 104 ntBASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 RNA5SP168-201ENST00000516642 112 ntBASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-958P-201ENST00000516995 106 ntBASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 AC020891.4-201ENST00000605745 93 ntBASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 AL020996.3-201ENST00000606617 222 ntBASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SH3RF3Q8TEJ3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 MIR516B2-201ENST00000385190 85 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 SNORD28B-201ENST00000390993 75 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-613P-201ENST00000410412 108 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 MIR4498-201ENST00000577599 66 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 MIR4255-201ENST00000579351 72 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 MIR3152-201ENST00000579801 74 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 AC096720.1-201ENST00000604441 183 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 SNORA28-201ENST00000606769 126 ntBASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SH3RF3Q8TEJ3 RPS29P29-201ENST00000456396 171 ntBASIC2.03□□□□□ -2.08
SH3RF3Q8TEJ3 RNU7-2P-201ENST00000516096 62 ntBASIC2.03□□□□□ -2.08
SH3RF3Q8TEJ3 MIR4303-201ENST00000581299 66 ntBASIC2.03□□□□□ -2.08
SH3RF3Q8TEJ3 MIR548AR-201ENST00000582191 57 ntBASIC2.03□□□□□ -2.08
SH3RF3Q8TEJ3 MIR4712-201ENST00000583750 82 ntBASIC2.03□□□□□ -2.08
SH3RF3Q8TEJ3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.03□□□□□ -2.08
SH3RF3Q8TEJ3 MIR4791-201ENST00000607666 84 ntBASIC2.03□□□□□ -2.08
SH3RF3Q8TEJ3 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
SH3RF3Q8TEJ3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-1244P-201ENST00000363614 108 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 RNU6-524P-201ENST00000384270 107 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 RNU6-342P-201ENST00000384521 104 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 MIR34C-201ENST00000384831 77 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 Y_RNA.609-201ENST00000410669 89 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 HMGN2P19-201ENST00000425149 265 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 RNU7-73P-201ENST00000458743 63 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 DNAJC19P9-201ENST00000555084 351 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 MIR502-201ENST00000606349 86 ntBASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.02□□□□□ -2.09
SH3RF3Q8TEJ3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 MIR337-201ENST00000362281 93 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 MIR206-201ENST00000384872 86 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 MIR597-201ENST00000384968 97 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 HMGN1P33-201ENST00000432945 451 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 RNU7-67P-201ENST00000459003 62 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 RNU7-53P-201ENST00000516705 60 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 RNU7-35P-201ENST00000517174 62 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 AC005786.1-201ENST00000588553 154 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 MIR8055-201ENST00000610739 97 ntBASIC2.01□□□□□ -2.09
SH3RF3Q8TEJ3 SNORD38.1-201ENST00000363863 68 ntBASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 SNORA1.2-201ENST00000365189 134 ntBASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 SNORA70.7-201ENST00000384159 133 ntBASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 MIR526A1-201ENST00000384897 85 ntBASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 RNU4-62P-201ENST00000410125 130 ntBASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 AC093850.1-201ENST00000454121 251 ntBASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 RNU7-12P-201ENST00000516030 62 ntBASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 MIR4713-201ENST00000582691 75 ntBASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 AC243994.1-201ENST00000618627 109 ntBASIC2□□□□□ -2.09
SH3RF3Q8TEJ3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SH3RF3Q8TEJ3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SH3RF3Q8TEJ3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.99□□□□□ -2.09
SH3RF3Q8TEJ3 SNORA48.1-201ENST00000390879 135 ntBASIC1.99□□□□□ -2.09
SH3RF3Q8TEJ3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
SH3RF3Q8TEJ3 AC069114.2-201ENST00000604699 304 ntBASIC1.99□□□□□ -2.09
SH3RF3Q8TEJ3 MIR8065-201ENST00000620577 100 ntBASIC1.99□□□□□ -2.09
SH3RF3Q8TEJ3 SNORD48-201ENST00000364953 64 ntBASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 MIR452-201ENST00000385020 85 ntBASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 MIR136-201ENST00000385207 82 ntBASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 AL034345.1-201ENST00000407768 123 ntBASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 RNA5SP261-201ENST00000410536 106 ntBASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 RNA5SP501-201ENST00000410990 112 ntBASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 SNORD123-201ENST00000459473 70 ntBASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 MIR5094-201ENST00000578766 85 ntBASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.98□□□□□ -2.09
SH3RF3Q8TEJ3 Y_RNA.565-201ENST00000384719 101 ntBASIC1.97□□□□□ -2.09
SH3RF3Q8TEJ3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.97□□□□□ -2.09
SH3RF3Q8TEJ3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
SH3RF3Q8TEJ3 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
SH3RF3Q8TEJ3 RNU6-523P-201ENST00000516304 54 ntBASIC1.97□□□□□ -2.09
SH3RF3Q8TEJ3 SNORD67.1-201ENST00000516618 108 ntBASIC1.97□□□□□ -2.09
SH3RF3Q8TEJ3 AC140658.3-201ENST00000567603 271 ntBASIC1.97□□□□□ -2.09
SH3RF3Q8TEJ3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.97□□□□□ -2.09
SH3RF3Q8TEJ3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms