Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.78□□□□□ -1.96
SNIP1Q8TAD8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SNIP1Q8TAD8 RNU6-112P-201ENST00000363599 104 ntBASIC2.77□□□□□ -1.97
SNIP1Q8TAD8 RNU1-91P-201ENST00000364746 163 ntBASIC2.77□□□□□ -1.97
SNIP1Q8TAD8 RNU6-291P-201ENST00000384720 107 ntBASIC2.77□□□□□ -1.97
SNIP1Q8TAD8 MIR504-201ENST00000385065 83 ntBASIC2.77□□□□□ -1.97
SNIP1Q8TAD8 RNA5SP481-201ENST00000516814 122 ntBASIC2.77□□□□□ -1.97
SNIP1Q8TAD8 AC121758.2-201ENST00000553271 193 ntBASIC2.77□□□□□ -1.97
SNIP1Q8TAD8 MIR4769-201ENST00000584126 77 ntBASIC2.77□□□□□ -1.97
SNIP1Q8TAD8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNIP1Q8TAD8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 Y_RNA.42-201ENST00000362660 108 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 RNU6-340P-201ENST00000364005 107 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 SNORA9.2-201ENST00000365361 133 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 RNU6-1051P-201ENST00000365471 102 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 RNU6-205P-201ENST00000390858 107 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 AC092628.1-201ENST00000436250 252 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 MIR3126-201ENST00000577443 74 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 MIR4524B-201ENST00000581569 115 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 SNORA4-201ENST00000584302 138 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 U4.3-201ENST00000621047 82 ntBASIC2.76□□□□□ -1.97
SNIP1Q8TAD8 MIR337-201ENST00000362281 93 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 RNU6-859P-201ENST00000362728 107 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 SNORA25.4-201ENST00000363666 124 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 Y_RNA.207-201ENST00000364142 106 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 RNU6-895P-201ENST00000384125 103 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 MIR627-201ENST00000384979 97 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 MIR563-201ENST00000385080 79 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 MIR9-1-201ENST00000385198 89 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 SNORA31.26-201ENST00000517250 137 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 PRELID3BP2-201ENST00000605362 201 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.75□□□□□ -1.97
SNIP1Q8TAD8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 SNORD45A-201ENST00000384512 84 ntBASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 SNORA46-201ENST00000384762 135 ntBASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 SNORA48.1-201ENST00000390879 135 ntBASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 UBBP3-201ENST00000445497 241 ntBASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 snoU13.26-201ENST00000459452 105 ntBASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 RNA5SP24-201ENST00000516478 95 ntBASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 AL449363.1-201ENST00000617815 186 ntBASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 ZNF209P-201ENST00000593450 2304 ntBASIC2.74□□□□□ -1.97
SNIP1Q8TAD8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNIP1Q8TAD8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNIP1Q8TAD8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNIP1Q8TAD8 Y_RNA.443-201ENST00000384135 111 ntBASIC2.73□□□□□ -1.97
SNIP1Q8TAD8 SNORD88.1-201ENST00000408684 91 ntBASIC2.73□□□□□ -1.97
SNIP1Q8TAD8 RNU7-26P-201ENST00000458980 63 ntBASIC2.73□□□□□ -1.97
SNIP1Q8TAD8 MIR3675-201ENST00000583661 73 ntBASIC2.73□□□□□ -1.97
SNIP1Q8TAD8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
SNIP1Q8TAD8 MAPK10-266ENST00000641066 6555 ntBASIC2.72□□□□□ -1.97
SNIP1Q8TAD8 RNU1-148P-201ENST00000384472 162 ntBASIC2.72□□□□□ -1.97
SNIP1Q8TAD8 SNORD63B-201ENST00000411005 70 ntBASIC2.72□□□□□ -1.97
SNIP1Q8TAD8 RN7SL75P-201ENST00000461926 281 ntBASIC2.72□□□□□ -1.97
SNIP1Q8TAD8 AC008413.1-201ENST00000511864 177 ntBASIC2.72□□□□□ -1.97
SNIP1Q8TAD8 MIR6740-201ENST00000618268 113 ntBASIC2.72□□□□□ -1.97
SNIP1Q8TAD8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNIP1Q8TAD8 AP006437.1-201ENST00000641440 3685 ntBASIC2.71□□□□□ -1.98
SNIP1Q8TAD8 MIR30D-201ENST00000362283 70 ntBASIC2.71□□□□□ -1.98
SNIP1Q8TAD8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.71□□□□□ -1.98
SNIP1Q8TAD8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 SNORD56.5-201ENST00000364281 72 ntBASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 RNU1-138P-201ENST00000384093 164 ntBASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 RNU6-614P-201ENST00000384369 107 ntBASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 SNORA67.4-201ENST00000384688 142 ntBASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 RNA5SP501-201ENST00000410990 112 ntBASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 AC104389.3-201ENST00000445629 235 ntBASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 MIR2113-201ENST00000459007 91 ntBASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 RNU6-1194P-201ENST00000516208 104 ntBASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 U6.59-201ENST00000615686 107 ntBASIC2.7□□□□□ -1.98
SNIP1Q8TAD8 RNU6-681P-201ENST00000364012 104 ntBASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 RNA5SP465-201ENST00000391195 109 ntBASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 RNA5SP274-201ENST00000410484 108 ntBASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 RNU6-531P-201ENST00000516694 104 ntBASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 RNA5SP137-201ENST00000516833 135 ntBASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 SNORD53-201ENST00000579969 78 ntBASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 MIR6817-201ENST00000615588 66 ntBASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SNIP1Q8TAD8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 RNY4P3-201ENST00000365254 95 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 MIR518A2-201ENST00000384966 87 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 RNU6-1165P-201ENST00000410119 107 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 RNA5SP21-201ENST00000410917 96 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 RNU1-143P-201ENST00000516296 146 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 SNORA31.15-201ENST00000516771 132 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 RNU6-881P-201ENST00000516813 102 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 MIR4511-201ENST00000582784 87 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 U1.23-201ENST00000610293 146 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 RNU1-68P-201ENST00000615382 146 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 AC007318.2-201ENST00000620999 243 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 U1.39-201ENST00000621562 146 ntBASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.68□□□□□ -1.98
SNIP1Q8TAD8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms