Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU6-370P-201ENST00000411008 104 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-408P-201ENST00000515910 100 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 MIR4724-201ENST00000579485 89 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORD18.1-201ENST00000363807 70 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-901P-201ENST00000384593 106 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 U6.92-201ENST00000636464 89 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORA72.4-201ENST00000384174 132 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU4-83P-201ENST00000410863 133 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 PMCHL1-202ENST00000423102 261 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RPS3AP52-201ENST00000435639 297 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU7-48P-201ENST00000458875 63 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU7-74P-201ENST00000459104 62 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORA20.3-201ENST00000516880 132 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 MIR4280-201ENST00000582178 76 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 AL669831.3-213ENST00000636676 183 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORD12C-201ENST00000386307 89 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-130P-201ENST00000411112 103 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 AF228730.4-201ENST00000421457 183 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNA5SP153-201ENST00000516498 76 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-531P-201ENST00000516694 104 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-307P-201ENST00000516743 106 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 MIR548H5-201ENST00000580314 60 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Z99129.1-201ENST00000612510 255 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNY3P11-201ENST00000364153 102 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU4-36P-201ENST00000364294 144 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR548A2-201ENST00000384956 97 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AC100767.1-201ENST00000528178 123 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR124-2-201ENST00000385081 109 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR196A1-201ENST00000388006 70 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNA5SP144-201ENST00000410846 116 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AC141846.1-201ENST00000568348 142 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 DEFB117-201ENST00000602356 141 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AC097639.2-201ENST00000603159 172 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AC092794.1-201ENST00000612734 582 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR599-201ENST00000385069 95 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNA5SP33-201ENST00000516687 98 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU6-570P-201ENST00000517051 105 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AC007012.1-201ENST00000567192 175 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR376A2-201ENST00000636782 80 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR20A-201ENST00000362279 71 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU6-449P-201ENST00000383914 107 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 SNORA69.1-201ENST00000390904 137 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AL731563.1-201ENST00000442202 214 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU7-30P-201ENST00000516835 62 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU2-31P-201ENST00000516954 155 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AP003357.1-201ENST00000604497 148 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AL133255.1-201ENST00000606374 441 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR181A1-201ENST00000385026 110 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 U8.15-201ENST00000390947 134 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RPS29P25-201ENST00000481709 171 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AL021707.8-201ENST00000609428 183 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR6507-201ENST00000613630 70 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 uc_338.19-201ENST00000616808 99 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 AC078883.4-201ENST00000623218 367 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR335-201ENST00000362173 94 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU4-80P-201ENST00000363200 141 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNY4P14-201ENST00000363656 96 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 SNORD110-201ENST00000408189 75 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU7-110P-201ENST00000516891 62 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR1244-1-201ENST00000612829 85 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR1244-3-201ENST00000635744 85 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR1244-2-201ENST00000636449 85 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 MIR1244-4-202ENST00000636813 85 ntBASIC-0.2□□□□□ -2.44
SYNE1Q8NF91 RNU6-312P-201ENST00000364629 107 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-571P-201ENST00000384128 107 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RN7SKP295-201ENST00000517264 153 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 MIR6841-201ENST00000637129 72 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 SNORD61-201ENST00000384252 73 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-472P-201ENST00000384299 107 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 MIR181B2-201ENST00000385004 89 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 MIR4263-201ENST00000584745 83 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms