Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC040926.1-201ENST00000530195 238 ntBASIC-0.53□□□□□ -2.49
ZNF439Q8NDP4 MIR548H5-201ENST00000580314 60 ntBASIC-0.53□□□□□ -2.49
ZNF439Q8NDP4 MIR5688-201ENST00000580619 83 ntBASIC-0.53□□□□□ -2.49
ZNF439Q8NDP4 MIR548AG2-201ENST00000581228 64 ntBASIC-0.53□□□□□ -2.49
ZNF439Q8NDP4 MIR548AE1-201ENST00000583292 70 ntBASIC-0.53□□□□□ -2.49
ZNF439Q8NDP4 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 RNU4-90P-201ENST00000362773 141 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 RNU6-509P-201ENST00000363519 107 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 RNU1-141P-201ENST00000364623 158 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 AL022718.1-201ENST00000412004 84 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 RNU6-277P-201ENST00000516272 106 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 SCARNA15-202ENST00000516881 127 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 AC080013.6-201ENST00000606185 215 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 AC133104.2-201ENST00000615272 193 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 MIR376A1-201ENST00000616574 68 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 U4.1-201ENST00000620349 87 ntBASIC-0.54□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 MIR539-201ENST00000365690 78 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 RNU6-429P-201ENST00000384582 108 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 SNORA8.3-201ENST00000384679 139 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 MIR181B2-201ENST00000385004 89 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 RNU6-121P-201ENST00000410525 99 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 AL731563.1-201ENST00000442202 214 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.55□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 RNU1-115P-201ENST00000365329 160 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 RNU6-455P-201ENST00000384681 107 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 MIR635-201ENST00000384830 98 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 MIR9-2-201ENST00000384838 87 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 MT-TL1-201ENST00000386347 75 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 SNORA53-201ENST00000391141 249 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 SNORA3B-201ENST00000391305 131 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 AL606845.1-201ENST00000404881 255 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 RNA5SP144-201ENST00000410846 116 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 AC093423.1-201ENST00000440817 142 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 AC082651.2-201ENST00000496833 166 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 SNORA27.4-201ENST00000516650 95 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 AL365205.2-201ENST00000594586 68 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 AC073869.6-201ENST00000640656 341 ntBASIC-0.56□□□□□ -2.5
ZNF439Q8NDP4 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 RNA5SP98-201ENST00000363158 137 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 RNU6-211P-201ENST00000384047 107 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 RNU7-195P-201ENST00000458793 62 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 RNU7-152P-201ENST00000458982 64 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 RNA5SP33-201ENST00000516687 98 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 YWHAEP2-201ENST00000580066 112 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 AC098479.1-201ENST00000609225 154 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 AC112487.2-201ENST00000637950 304 ntBASIC-0.57□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNU4-84P-201ENST00000364200 139 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNY3P5-201ENST00000384127 102 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNU4-70P-201ENST00000384579 139 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 SNORD56B-201ENST00000384713 71 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 MIR519E-201ENST00000385075 84 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 AL603914.1-201ENST00000401964 204 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 Z83846.1-201ENST00000446798 265 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 AC097635.1-201ENST00000450678 155 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNU6-893P-201ENST00000458841 100 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNU7-113P-201ENST00000459273 62 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 RNU7-70P-201ENST00000516941 66 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 MTND5P40-201ENST00000559945 246 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 MIR4500-201ENST00000579472 76 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 MIR4280-201ENST00000582178 76 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 MIR548AE2-201ENST00000583456 67 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 AP001180.6-201ENST00000584918 159 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 AL138825.1-201ENST00000618587 192 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 uc_338.10-201ENST00000621872 182 ntBASIC-0.58□□□□□ -2.5
ZNF439Q8NDP4 SNORD115-2-201ENST00000362842 82 ntBASIC-0.59□□□□□ -2.5
ZNF439Q8NDP4 RNU6-623P-201ENST00000363143 105 ntBASIC-0.59□□□□□ -2.5
ZNF439Q8NDP4 SNORD114-10-201ENST00000363409 72 ntBASIC-0.59□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.59□□□□□ -2.5
ZNF439Q8NDP4 SNORD115-20-201ENST00000365099 82 ntBASIC-0.59□□□□□ -2.5
ZNF439Q8NDP4 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 206.1 ms