Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 U6.90-201ENST00000614007 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 U6.70-201ENST00000620287 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 AC023934.1-201ENST00000574529 2389 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CLRN3Q8NCR9 AL391516.1-201ENST00000554380 2449 ntBASIC1.27□□□□□ -2.21
CLRN3Q8NCR9 RNU1-42P-201ENST00000364033 160 ntBASIC1.27□□□□□ -2.21
CLRN3Q8NCR9 RNU6-1144P-201ENST00000384247 104 ntBASIC1.27□□□□□ -2.21
CLRN3Q8NCR9 RNU6-476P-201ENST00000384726 107 ntBASIC1.27□□□□□ -2.21
CLRN3Q8NCR9 AC023790.1-201ENST00000482174 347 ntBASIC1.27□□□□□ -2.21
CLRN3Q8NCR9 SNORD67.1-201ENST00000516618 108 ntBASIC1.27□□□□□ -2.21
CLRN3Q8NCR9 RNU7-137P-201ENST00000516788 62 ntBASIC1.27□□□□□ -2.21
CLRN3Q8NCR9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 RNU6-616P-201ENST00000384353 107 ntBASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 RNU6-880P-201ENST00000384526 107 ntBASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 MIR100-201ENST00000385259 80 ntBASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 MIR942-201ENST00000401111 86 ntBASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 MIR1827-201ENST00000408549 66 ntBASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 SNORD93-201ENST00000408813 74 ntBASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 Y_RNA.629-201ENST00000411368 105 ntBASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 RNU7-185P-201ENST00000459215 60 ntBASIC1.26□□□□□ -2.21
CLRN3Q8NCR9 SNORD114-1-201ENST00000362705 72 ntBASIC1.25□□□□□ -2.21
CLRN3Q8NCR9 Y_RNA.362-201ENST00000365518 110 ntBASIC1.25□□□□□ -2.21
CLRN3Q8NCR9 SNORD116-21-201ENST00000384507 92 ntBASIC1.25□□□□□ -2.21
CLRN3Q8NCR9 MIR548A1-201ENST00000385041 97 ntBASIC1.25□□□□□ -2.21
CLRN3Q8NCR9 U8.15-201ENST00000390947 134 ntBASIC1.25□□□□□ -2.21
CLRN3Q8NCR9 AC133485.1-201ENST00000567176 124 ntBASIC1.25□□□□□ -2.21
CLRN3Q8NCR9 MIR583-201ENST00000384846 75 ntBASIC1.24□□□□□ -2.21
CLRN3Q8NCR9 U7.7-201ENST00000459276 60 ntBASIC1.24□□□□□ -2.21
CLRN3Q8NCR9 RPL39P34-201ENST00000477141 156 ntBASIC1.24□□□□□ -2.21
CLRN3Q8NCR9 RNU7-2P-201ENST00000516096 62 ntBASIC1.24□□□□□ -2.21
CLRN3Q8NCR9 RNU6-412P-201ENST00000516434 106 ntBASIC1.24□□□□□ -2.21
CLRN3Q8NCR9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.24□□□□□ -2.21
CLRN3Q8NCR9 AL589743.1-201ENST00000551932 2712 ntBASIC1.24□□□□□ -2.21
CLRN3Q8NCR9 RNU1-36P-201ENST00000365130 165 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 Y_RNA.344-201ENST00000365381 112 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 Y_RNA.507-201ENST00000384500 99 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 MIR206-201ENST00000384872 86 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 MIR125B2-201ENST00000385128 89 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 SNORD124-201ENST00000459577 104 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 RNU6-977P-201ENST00000516411 103 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 RNA5SP61-201ENST00000516453 100 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 MIR3945-201ENST00000581853 98 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 MIR4676-201ENST00000583078 72 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.23□□□□□ -2.21
CLRN3Q8NCR9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 Y_RNA.309-201ENST00000365046 111 ntBASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 SNORD115-35-201ENST00000365122 82 ntBASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 MIR1912-201ENST00000410389 80 ntBASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 RNU1-41P-201ENST00000516161 162 ntBASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 RNU1-48P-201ENST00000516400 162 ntBASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.22□□□□□ -2.21
CLRN3Q8NCR9 Y_RNA.49-201ENST00000362714 112 ntBASIC1.21□□□□□ -2.22
CLRN3Q8NCR9 RNU6-53P-201ENST00000365367 106 ntBASIC1.21□□□□□ -2.22
CLRN3Q8NCR9 MIR938-201ENST00000401216 83 ntBASIC1.21□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.773-201ENST00000607168 90 ntBASIC1.21□□□□□ -2.22
CLRN3Q8NCR9 AL162726.3-218ENST00000636401 95 ntBASIC1.21□□□□□ -2.22
CLRN3Q8NCR9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CLRN3Q8NCR9 RNU6-363P-201ENST00000362895 105 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.85-201ENST00000363014 111 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.98-201ENST00000363109 102 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 RNU4-67P-201ENST00000364569 141 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 RNU6-865P-201ENST00000364772 107 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.448-201ENST00000384185 108 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 RNU6-364P-201ENST00000384387 107 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 SNORD89-201ENST00000390981 114 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 RNU4-83P-201ENST00000410863 133 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 AC020891.4-201ENST00000605745 93 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 AC105081.1-201ENST00000617727 106 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 MIR1255B1-201ENST00000636325 63 ntBASIC1.2□□□□□ -2.22
CLRN3Q8NCR9 SNORA63.5-201ENST00000363548 123 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.281-201ENST00000364774 94 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 RNY1P2-201ENST00000364820 117 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 AC003989.2-201ENST00000440224 169 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 RNU7-48P-201ENST00000458875 63 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 snoU13.15-201ENST00000459407 104 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 RN7SL429P-201ENST00000479090 223 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 RN7SL489P-201ENST00000486185 223 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 RN7SL327P-201ENST00000488659 223 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 MIR4804-201ENST00000581683 73 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 AC025627.3-201ENST00000582078 182 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 RN7SL853P-201ENST00000617250 223 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 MIR7843-201ENST00000622274 79 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 AL035470.1-201ENST00000622571 220 ntBASIC1.19□□□□□ -2.22
CLRN3Q8NCR9 RNU6-369P-201ENST00000362515 102 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.35-201ENST00000362601 101 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 RNU6-409P-201ENST00000384114 104 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 MIR520F-201ENST00000384824 87 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 MIR9-3-201ENST00000385084 90 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 RNU6-1321P-201ENST00000390905 107 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 RNU6-816P-201ENST00000390914 107 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 RNU6-1268P-201ENST00000391214 107 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 RNU6-1239P-201ENST00000391310 107 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 MIR1304-201ENST00000408243 91 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 AC015818.7-201ENST00000428754 109 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms