Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU6-716P-201ENST00000365621 103 ntBASIC-0.1□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.1□□□□□ -2.43
CCDC65Q8IXS2 RNU7-79P-201ENST00000516082 62 ntBASIC-0.1□□□□□ -2.43
CCDC65Q8IXS2 RNA5SP128-201ENST00000365305 116 ntBASIC-0.11□□□□□ -2.43
CCDC65Q8IXS2 RNU4-17P-201ENST00000365598 141 ntBASIC-0.11□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.11□□□□□ -2.43
CCDC65Q8IXS2 MT-TW-201ENST00000387382 68 ntBASIC-0.11□□□□□ -2.43
CCDC65Q8IXS2 MIR760-201ENST00000390220 80 ntBASIC-0.11□□□□□ -2.43
CCDC65Q8IXS2 RNA5SP63-201ENST00000391225 112 ntBASIC-0.11□□□□□ -2.43
CCDC65Q8IXS2 RNU6-531P-201ENST00000516694 104 ntBASIC-0.11□□□□□ -2.43
CCDC65Q8IXS2 RNU7-35P-201ENST00000517174 62 ntBASIC-0.11□□□□□ -2.43
CCDC65Q8IXS2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.11□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 RNU4-16P-201ENST00000364737 141 ntBASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 MIR624-201ENST00000385217 97 ntBASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 SNORA79-201ENST00000408376 140 ntBASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 AL358176.2-201ENST00000425769 204 ntBASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 SNORD116-25-201ENST00000516517 92 ntBASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 MIR378D2-201ENST00000580636 98 ntBASIC-0.12□□□□□ -2.43
CCDC65Q8IXS2 SNORA63.5-201ENST00000363548 123 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 RNU6-103P-201ENST00000363686 107 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 MIR643-201ENST00000385267 97 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 MTND4LP11-201ENST00000422184 280 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 AC108059.2-201ENST00000434626 151 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 RPL39P34-201ENST00000477141 156 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 MIR499B-201ENST00000636498 73 ntBASIC-0.13□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.14□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.14□□□□□ -2.43
CCDC65Q8IXS2 MIR145-201ENST00000384967 88 ntBASIC-0.14□□□□□ -2.43
CCDC65Q8IXS2 RNA5SP144-201ENST00000410846 116 ntBASIC-0.14□□□□□ -2.43
CCDC65Q8IXS2 RNA5SP127-201ENST00000411051 133 ntBASIC-0.14□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.14□□□□□ -2.43
CCDC65Q8IXS2 MIR4744-201ENST00000581563 82 ntBASIC-0.14□□□□□ -2.43
CCDC65Q8IXS2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.14□□□□□ -2.43
CCDC65Q8IXS2 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.15□□□□□ -2.43
CCDC65Q8IXS2 RNU6-472P-201ENST00000384299 107 ntBASIC-0.15□□□□□ -2.43
CCDC65Q8IXS2 AL121914.1-201ENST00000450188 156 ntBASIC-0.15□□□□□ -2.43
CCDC65Q8IXS2 RNU7-70P-201ENST00000516941 66 ntBASIC-0.15□□□□□ -2.43
CCDC65Q8IXS2 AP003072.1-201ENST00000531740 145 ntBASIC-0.15□□□□□ -2.43
CCDC65Q8IXS2 AL356055.1-201ENST00000602528 446 ntBASIC-0.15□□□□□ -2.43
CCDC65Q8IXS2 SNORD115-2-201ENST00000362842 82 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNU6-161P-201ENST00000363051 106 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNA5SP133-201ENST00000363368 119 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNA5SP325-201ENST00000363756 130 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNU6-726P-201ENST00000364680 107 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNU6-867P-201ENST00000364956 107 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNU6-702P-201ENST00000364982 107 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 SNORD115-20-201ENST00000365099 82 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 MIR593-201ENST00000384856 100 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 MIR610-201ENST00000385139 96 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNU6-578P-201ENST00000390980 103 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNU6-893P-201ENST00000458841 100 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNU7-129P-201ENST00000516128 62 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNY3P16-201ENST00000516338 101 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNU6-782P-201ENST00000516852 104 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 AC141557.1-201ENST00000540982 400 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 MIR5190-201ENST00000581537 80 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 MIR8062-201ENST00000621515 85 ntBASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.16□□□□□ -2.44
CCDC65Q8IXS2 RNU6-756P-201ENST00000383997 107 ntBASIC-0.17□□□□□ -2.44
CCDC65Q8IXS2 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.17□□□□□ -2.44
CCDC65Q8IXS2 MIR1197-201ENST00000408818 88 ntBASIC-0.17□□□□□ -2.44
CCDC65Q8IXS2 AC244505.6-201ENST00000452829 130 ntBASIC-0.17□□□□□ -2.44
CCDC65Q8IXS2 AC138749.4-201ENST00000563970 127 ntBASIC-0.17□□□□□ -2.44
CCDC65Q8IXS2 MIR4743-201ENST00000584576 69 ntBASIC-0.17□□□□□ -2.44
CCDC65Q8IXS2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.17□□□□□ -2.44
CCDC65Q8IXS2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.17□□□□□ -2.44
CCDC65Q8IXS2 RNU4-58P-201ENST00000363192 141 ntBASIC-0.18□□□□□ -2.44
CCDC65Q8IXS2 RNU6-639P-201ENST00000384074 107 ntBASIC-0.18□□□□□ -2.44
CCDC65Q8IXS2 RNY1P6-201ENST00000384193 109 ntBASIC-0.18□□□□□ -2.44
CCDC65Q8IXS2 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.18□□□□□ -2.44
CCDC65Q8IXS2 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.18□□□□□ -2.44
CCDC65Q8IXS2 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.18□□□□□ -2.44
CCDC65Q8IXS2 AL359881.1-201ENST00000602916 267 ntBASIC-0.18□□□□□ -2.44
CCDC65Q8IXS2 AL162376.1-201ENST00000624117 175 ntBASIC-0.18□□□□□ -2.44
CCDC65Q8IXS2 U6.109-201ENST00000636749 87 ntBASIC-0.18□□□□□ -2.44
CCDC65Q8IXS2 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.19□□□□□ -2.44
CCDC65Q8IXS2 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.19□□□□□ -2.44
CCDC65Q8IXS2 MIR501-201ENST00000390204 84 ntBASIC-0.19□□□□□ -2.44
CCDC65Q8IXS2 MTATP8P1-201ENST00000467115 207 ntBASIC-0.19□□□□□ -2.44
CCDC65Q8IXS2 RNU7-137P-201ENST00000516788 62 ntBASIC-0.19□□□□□ -2.44
CCDC65Q8IXS2 RNA5SP480-201ENST00000516840 109 ntBASIC-0.19□□□□□ -2.44
CCDC65Q8IXS2 RNU7-161P-201ENST00000517289 62 ntBASIC-0.19□□□□□ -2.44
CCDC65Q8IXS2 DEFB131E-201ENST00000532329 154 ntBASIC-0.19□□□□□ -2.44
CCDC65Q8IXS2 SNORA70.25-201ENST00000612741 95 ntBASIC-0.19□□□□□ -2.44
CCDC65Q8IXS2 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.2□□□□□ -2.44
CCDC65Q8IXS2 SNORD115-24-201ENST00000363528 82 ntBASIC-0.2□□□□□ -2.44
CCDC65Q8IXS2 SNORD114-26-201ENST00000363543 72 ntBASIC-0.2□□□□□ -2.44
CCDC65Q8IXS2 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.2□□□□□ -2.44
CCDC65Q8IXS2 RNU6-713P-201ENST00000384761 107 ntBASIC-0.2□□□□□ -2.44
CCDC65Q8IXS2 RNU6-635P-201ENST00000516651 102 ntBASIC-0.2□□□□□ -2.44
CCDC65Q8IXS2 MIR4305-201ENST00000583252 102 ntBASIC-0.2□□□□□ -2.44
CCDC65Q8IXS2 AL360085.1-201ENST00000604713 532 ntBASIC-0.2□□□□□ -2.44
CCDC65Q8IXS2 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms