Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 Y_RNA.709-201ENST00000516952 92 ntBASIC1.51□□□□□ -2.17
UBE3BQ7Z3V4 Y_RNA.281-201ENST00000364774 94 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 SNORA25.9-201ENST00000365087 128 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 MIR548D2-201ENST00000384955 97 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 AC063976.4-201ENST00000421971 163 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 AC244023.1-201ENST00000426884 112 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 MIR2115-201ENST00000516657 100 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 RNA5SP33-201ENST00000516687 98 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 RN7SKP88-201ENST00000516847 250 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 RNA5SP102-201ENST00000516865 106 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 MIR548AE2-201ENST00000583456 67 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 AC242498.1-201ENST00000604134 111 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 7SK.8-201ENST00000612110 250 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 7SK.11-201ENST00000615477 250 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 AC087741.2-201ENST00000619415 172 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 7SK.13-201ENST00000622040 250 ntBASIC1.5□□□□□ -2.17
UBE3BQ7Z3V4 MIR499A-201ENST00000384903 122 ntBASIC1.49□□□□□ -2.17
UBE3BQ7Z3V4 RNY4P18-201ENST00000391107 89 ntBASIC1.49□□□□□ -2.17
UBE3BQ7Z3V4 MIR103A2-201ENST00000362154 78 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 SNORD115-19-201ENST00000363098 82 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 SNORD115-18-201ENST00000363293 82 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 SNORD115-17-201ENST00000364612 82 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 Y_RNA.362-201ENST00000365518 110 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 SNORD12C-201ENST00000386307 89 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 RNU6-613P-201ENST00000410412 108 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 AL035461.1-201ENST00000421490 332 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 MIR1270-201ENST00000459320 83 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 MIR4264-201ENST00000583520 66 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 MIR7111-201ENST00000619751 72 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 MIR6516-201ENST00000630554 81 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 AL161722.3-201ENST00000605789 2983 ntBASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBE3BQ7Z3V4 MIR377-201ENST00000362145 69 ntBASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 Y_RNA.344-201ENST00000365381 112 ntBASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 AC048334.1-201ENST00000477975 159 ntBASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 RNU7-6P-201ENST00000516845 62 ntBASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 RNU7-35P-201ENST00000517174 62 ntBASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 AL035470.1-201ENST00000622571 220 ntBASIC1.47□□□□□ -2.17
UBE3BQ7Z3V4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
UBE3BQ7Z3V4 MIR96-201ENST00000362288 78 ntBASIC1.46□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.46□□□□□ -2.18
UBE3BQ7Z3V4 RNU6-342P-201ENST00000384521 104 ntBASIC1.46□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.549-201ENST00000384657 102 ntBASIC1.46□□□□□ -2.18
UBE3BQ7Z3V4 snoU13.2-201ENST00000459201 104 ntBASIC1.46□□□□□ -2.18
UBE3BQ7Z3V4 RPL39P34-201ENST00000477141 156 ntBASIC1.46□□□□□ -2.18
UBE3BQ7Z3V4 RNU6-412P-201ENST00000516434 106 ntBASIC1.46□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.81-201ENST00000362997 102 ntBASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.85-201ENST00000363014 111 ntBASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 SNORA18-201ENST00000384416 132 ntBASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 MIR563-201ENST00000385080 79 ntBASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 SNORA31.2-201ENST00000516019 134 ntBASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 AP000753.3-201ENST00000604083 169 ntBASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBE3BQ7Z3V4 RNU6-755P-201ENST00000364400 103 ntBASIC1.44□□□□□ -2.18
UBE3BQ7Z3V4 RNU6-580P-201ENST00000365159 107 ntBASIC1.44□□□□□ -2.18
UBE3BQ7Z3V4 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
UBE3BQ7Z3V4 SNORD77B-201ENST00000391112 67 ntBASIC1.44□□□□□ -2.18
UBE3BQ7Z3V4 SEPT14P17-201ENST00000617978 177 ntBASIC1.44□□□□□ -2.18
UBE3BQ7Z3V4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBE3BQ7Z3V4 AL589743.1-201ENST00000551932 2712 ntBASIC1.43□□□□□ -2.18
UBE3BQ7Z3V4 SNORD114-27-201ENST00000363766 70 ntBASIC1.43□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.43□□□□□ -2.18
UBE3BQ7Z3V4 RNU6-44P-201ENST00000384045 107 ntBASIC1.43□□□□□ -2.18
UBE3BQ7Z3V4 MIR6504-201ENST00000613520 61 ntBASIC1.43□□□□□ -2.18
UBE3BQ7Z3V4 RNU6-654P-201ENST00000364373 107 ntBASIC1.42□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.323-201ENST00000365157 109 ntBASIC1.42□□□□□ -2.18
UBE3BQ7Z3V4 SNORA32-201ENST00000384072 121 ntBASIC1.42□□□□□ -2.18
UBE3BQ7Z3V4 MIR588-201ENST00000384900 83 ntBASIC1.42□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.773-201ENST00000607168 90 ntBASIC1.42□□□□□ -2.18
UBE3BQ7Z3V4 RNU6-94P-201ENST00000607728 107 ntBASIC1.42□□□□□ -2.18
UBE3BQ7Z3V4 AL662814.1-201ENST00000617364 121 ntBASIC1.42□□□□□ -2.18
UBE3BQ7Z3V4 MIR6740-201ENST00000618268 113 ntBASIC1.42□□□□□ -2.18
UBE3BQ7Z3V4 AL162726.3-218ENST00000636401 95 ntBASIC1.42□□□□□ -2.18
UBE3BQ7Z3V4 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.49-201ENST00000362714 112 ntBASIC1.41□□□□□ -2.18
UBE3BQ7Z3V4 SNORA63.5-201ENST00000363548 123 ntBASIC1.41□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.41□□□□□ -2.18
UBE3BQ7Z3V4 RNU6-1107P-201ENST00000364817 104 ntBASIC1.41□□□□□ -2.18
UBE3BQ7Z3V4 MIR518E-201ENST00000385252 88 ntBASIC1.41□□□□□ -2.18
UBE3BQ7Z3V4 RNU7-79P-201ENST00000516082 62 ntBASIC1.41□□□□□ -2.18
UBE3BQ7Z3V4 Y_RNA.309-201ENST00000365046 111 ntBASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 RNU6-616P-201ENST00000384353 107 ntBASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 SNORA75.2-201ENST00000391138 150 ntBASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 SNORA75.3-201ENST00000391231 150 ntBASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 RNU7-62P-201ENST00000458856 62 ntBASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 AC068339.1-201ENST00000526965 141 ntBASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 AC141846.1-201ENST00000568348 142 ntBASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 FAM71BP1-201ENST00000604431 523 ntBASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
UBE3BQ7Z3V4 MIR30D-201ENST00000362283 70 ntBASIC1.39□□□□□ -2.19
UBE3BQ7Z3V4 RNU6-363P-201ENST00000362895 105 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 261.4 ms