Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.1□□□□□ -2.07
CNKSR3Q6P9H4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 Y_RNA.226-201ENST00000364337 114 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 RNA5SP190-201ENST00000365222 118 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 Y_RNA.611-201ENST00000410682 108 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 snoU13.27-201ENST00000459278 104 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 MIR514B-201ENST00000516774 80 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 MIR4709-201ENST00000577272 72 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 MIR4781-201ENST00000585250 76 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 FAM106DP-201ENST00000586416 501 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 MIR548BB-201ENST00000626714 66 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 SNORD3E-202ENST00000627253 216 ntBASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.09□□□□□ -2.07
CNKSR3Q6P9H4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
CNKSR3Q6P9H4 MIR378A-201ENST00000362177 66 ntBASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 SNORD38.1-201ENST00000363863 68 ntBASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 Y_RNA.426-201ENST00000384068 113 ntBASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 AC003989.2-201ENST00000440224 169 ntBASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 snoU13.16-201ENST00000459350 104 ntBASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 SNORA25.15-201ENST00000516487 89 ntBASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 SNORD67.1-201ENST00000516618 108 ntBASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CNKSR3Q6P9H4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-509P-201ENST00000363519 107 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-602P-201ENST00000411155 105 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 SNORD13-201ENST00000459299 104 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 SNORA74.3-201ENST00000517108 154 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 SNRPGP19-201ENST00000603826 189 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 AC020891.4-201ENST00000605745 93 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 Z97988.1-201ENST00000637697 135 ntBASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CNKSR3Q6P9H4 MIR424-201ENST00000362227 98 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-1244P-201ENST00000363614 108 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 Y_RNA.448-201ENST00000384185 108 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-1321P-201ENST00000390905 107 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 RNU7-79P-201ENST00000516082 62 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-65P-201ENST00000516332 98 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 RNA5SP481-201ENST00000516814 122 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 SNORA31.17-201ENST00000516953 127 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 AC084768.2-201ENST00000622736 221 ntBASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
CNKSR3Q6P9H4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-633P-201ENST00000362612 103 ntBASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 MIR9-3-201ENST00000385084 90 ntBASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-613P-201ENST00000410412 108 ntBASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 Y_RNA.609-201ENST00000410669 89 ntBASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 MIR4713-201ENST00000582691 75 ntBASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 AC105081.1-201ENST00000617727 106 ntBASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CNKSR3Q6P9H4 SNORD115-27-201ENST00000364430 82 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-652P-201ENST00000365488 107 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-1296P-201ENST00000383879 107 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-24P-201ENST00000384440 107 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 Y_RNA.567-201ENST00000384736 106 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-1086P-201ENST00000410930 100 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 RPS29P28-201ENST00000446439 141 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 RNU1-98P-201ENST00000458992 160 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 RNU6-917P-201ENST00000516294 104 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 RNU7-137P-201ENST00000516788 62 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 AC008133.2-201ENST00000624540 351 ntBASIC2.04□□□□□ -2.08
CNKSR3Q6P9H4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CNKSR3Q6P9H4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CNKSR3Q6P9H4 MIR548G-201ENST00000408442 89 ntBASIC2.03□□□□□ -2.08
CNKSR3Q6P9H4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.03□□□□□ -2.08
CNKSR3Q6P9H4 MIR548AO-201ENST00000579992 96 ntBASIC2.03□□□□□ -2.08
CNKSR3Q6P9H4 MIR4764-201ENST00000580680 88 ntBASIC2.03□□□□□ -2.08
CNKSR3Q6P9H4 AC005336.3-201ENST00000623833 2679 ntBASIC2.03□□□□□ -2.09
CNKSR3Q6P9H4 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-865P-201ENST00000364772 107 ntBASIC2.02□□□□□ -2.09
CNKSR3Q6P9H4 MIR1287-201ENST00000408492 90 ntBASIC2.02□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-321P-201ENST00000410912 106 ntBASIC2.02□□□□□ -2.09
CNKSR3Q6P9H4 HMGN2P19-201ENST00000425149 265 ntBASIC2.02□□□□□ -2.09
CNKSR3Q6P9H4 RNU7-43P-201ENST00000516554 64 ntBASIC2.02□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-250P-201ENST00000516958 103 ntBASIC2.02□□□□□ -2.09
CNKSR3Q6P9H4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CNKSR3Q6P9H4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 AP000648.3-201ENST00000623539 4507 ntBASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 SNORD114-10-201ENST00000363409 72 ntBASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 Y_RNA.173-201ENST00000363776 113 ntBASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 Y_RNA.354-201ENST00000365448 111 ntBASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-360P-201ENST00000390944 104 ntBASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 Y_RNA.607-201ENST00000410597 98 ntBASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
CNKSR3Q6P9H4 RNU6-90P-201ENST00000606352 106 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms