Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 MIR8063-201ENST00000621930 81 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
SF3B3Q15393 Y_RNA.191-201ENST00000363972 113 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 Y_RNA.323-201ENST00000365157 109 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 RNU6-147P-201ENST00000383983 107 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 RNU4-69P-201ENST00000410677 143 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 RNU6-602P-201ENST00000411155 105 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 snoU13.25-201ENST00000458945 104 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 RNA5SP33-201ENST00000516687 98 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 MIR4452-201ENST00000583004 71 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 RNU6-94P-201ENST00000607728 107 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.56□□□□□ -2.16
SF3B3Q15393 Y_RNA.49-201ENST00000362714 112 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 SNORD115-19-201ENST00000363098 82 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 SNORD115-18-201ENST00000363293 82 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 Y_RNA.224-201ENST00000364308 111 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 SNORD115-17-201ENST00000364612 82 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 SNORD114-22-201ENST00000365423 72 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 AC245517.4-201ENST00000448601 281 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 MIR1270-201ENST00000459320 83 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 RNA5SP445-201ENST00000515889 115 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 AC068338.1-201ENST00000565567 176 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 MIR548AE2-201ENST00000583456 67 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 SNORA4-201ENST00000584302 138 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 uc_338.28-201ENST00000612082 187 ntBASIC1.55□□□□□ -2.16
SF3B3Q15393 MIR26B-201ENST00000362251 77 ntBASIC1.54□□□□□ -2.16
SF3B3Q15393 Y_RNA.354-201ENST00000365448 111 ntBASIC1.54□□□□□ -2.16
SF3B3Q15393 RNU6-1014P-201ENST00000383940 103 ntBASIC1.54□□□□□ -2.16
SF3B3Q15393 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.16
SF3B3Q15393 MIR1302-7-201ENST00000408841 72 ntBASIC1.54□□□□□ -2.16
SF3B3Q15393 RNU6-554P-201ENST00000410466 106 ntBASIC1.54□□□□□ -2.16
SF3B3Q15393 AC079140.2-201ENST00000506193 142 ntBASIC1.54□□□□□ -2.16
SF3B3Q15393 RNU6-902P-201ENST00000517212 91 ntBASIC1.54□□□□□ -2.16
SF3B3Q15393 CYP3A52P-201ENST00000563326 91 ntBASIC1.54□□□□□ -2.16
SF3B3Q15393 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SF3B3Q15393 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
SF3B3Q15393 RNU1-93P-201ENST00000364704 169 ntBASIC1.53□□□□□ -2.16
SF3B3Q15393 U8.6-201ENST00000364939 135 ntBASIC1.53□□□□□ -2.16
SF3B3Q15393 AC027119.1-201ENST00000440877 241 ntBASIC1.53□□□□□ -2.16
SF3B3Q15393 AC068339.1-201ENST00000526965 141 ntBASIC1.53□□□□□ -2.16
SF3B3Q15393 MIR5009-201ENST00000578736 100 ntBASIC1.53□□□□□ -2.16
SF3B3Q15393 MIR3613-201ENST00000579844 87 ntBASIC1.53□□□□□ -2.16
SF3B3Q15393 Y_RNA.773-201ENST00000607168 90 ntBASIC1.53□□□□□ -2.16
SF3B3Q15393 AL162726.3-218ENST00000636401 95 ntBASIC1.53□□□□□ -2.16
SF3B3Q15393 Y_RNA.163-201ENST00000363702 113 ntBASIC1.52□□□□□ -2.17
SF3B3Q15393 Y_RNA.309-201ENST00000365046 111 ntBASIC1.52□□□□□ -2.17
SF3B3Q15393 AC019176.1-201ENST00000518519 225 ntBASIC1.52□□□□□ -2.17
SF3B3Q15393 AP003716.2-201ENST00000528260 108 ntBASIC1.52□□□□□ -2.17
SF3B3Q15393 PRELID3BP2-201ENST00000605362 201 ntBASIC1.52□□□□□ -2.17
SF3B3Q15393 RNU6-342P-201ENST00000384521 104 ntBASIC1.51□□□□□ -2.17
SF3B3Q15393 SNORD38B-201ENST00000384690 67 ntBASIC1.51□□□□□ -2.17
SF3B3Q15393 AL031737.1-201ENST00000450125 223 ntBASIC1.51□□□□□ -2.17
SF3B3Q15393 SNORD38B-202ENST00000625943 69 ntBASIC1.51□□□□□ -2.17
SF3B3Q15393 MIR1255B1-201ENST00000636325 63 ntBASIC1.51□□□□□ -2.17
SF3B3Q15393 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SF3B3Q15393 MIR450A1-201ENST00000362262 91 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 SNORA25.3-201ENST00000363205 127 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 SNORA32-201ENST00000384072 121 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 SNORD77B-201ENST00000391112 67 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 MIR1912-201ENST00000410389 80 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 AC244023.1-201ENST00000426884 112 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 AC245047.7-201ENST00000440265 293 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 RPL39P39-201ENST00000455840 151 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 AL133373.1-201ENST00000497098 94 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 RNU6-947P-201ENST00000516264 106 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 RNU7-35P-201ENST00000517174 62 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 MIR3664-201ENST00000579074 99 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 AC242498.1-201ENST00000604134 111 ntBASIC1.5□□□□□ -2.17
SF3B3Q15393 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
SF3B3Q15393 Y_RNA.118-201ENST00000363300 101 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 Y_RNA.328-201ENST00000365208 113 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 RNU6-616P-201ENST00000384353 107 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 SNORA18-201ENST00000384416 132 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 RNU6-1065P-201ENST00000384513 106 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 MIR489-201ENST00000384923 84 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 RNU6-816P-201ENST00000390914 107 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 RNU6-1268P-201ENST00000391214 107 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 RNU6-1239P-201ENST00000391310 107 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 MIR1302-5-201ENST00000408164 150 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 RPL30P7-201ENST00000479312 323 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 RNU6-165P-201ENST00000517170 99 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 MIR3937-201ENST00000580135 106 ntBASIC1.49□□□□□ -2.17
SF3B3Q15393 RNU6-363P-201ENST00000362895 105 ntBASIC1.48□□□□□ -2.17
SF3B3Q15393 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.48□□□□□ -2.17
SF3B3Q15393 RPL39P25-201ENST00000449384 154 ntBASIC1.48□□□□□ -2.17
SF3B3Q15393 AL512310.8-201ENST00000550183 120 ntBASIC1.48□□□□□ -2.17
SF3B3Q15393 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
SF3B3Q15393 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
SF3B3Q15393 RNU6-766P-201ENST00000362478 107 ntBASIC1.47□□□□□ -2.17
SF3B3Q15393 RNU6-756P-201ENST00000383997 107 ntBASIC1.47□□□□□ -2.17
SF3B3Q15393 MIR1185-1-201ENST00000408598 86 ntBASIC1.47□□□□□ -2.17
SF3B3Q15393 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.47□□□□□ -2.17
SF3B3Q15393 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
SF3B3Q15393 MIR6767-201ENST00000637302 66 ntBASIC1.47□□□□□ -2.17
SF3B3Q15393 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SF3B3Q15393 RNA5SP264-201ENST00000363115 107 ntBASIC1.46□□□□□ -2.18
SF3B3Q15393 RNU4-67P-201ENST00000364569 141 ntBASIC1.46□□□□□ -2.18
SF3B3Q15393 RNU6-396P-201ENST00000365369 105 ntBASIC1.46□□□□□ -2.18
SF3B3Q15393 SNORA51.5-201ENST00000384126 131 ntBASIC1.46□□□□□ -2.18
SF3B3Q15393 Y_RNA.507-201ENST00000384500 99 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms