Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 SNORA22.1-201ENST00000362701 134 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 RNU6-508P-201ENST00000363231 103 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 RNA5SP133-201ENST00000363368 119 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 SNORD115-24-201ENST00000363528 82 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 RNY1P11-201ENST00000363759 113 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 RNY1P2-201ENST00000364820 117 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 AC244250.2-201ENST00000418731 148 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 TRBVB-201ENST00000477100 408 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 RNU7-79P-201ENST00000516082 62 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 MIR548AE1-201ENST00000583292 70 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 MIR548AD-201ENST00000584780 82 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 MIR4436A-201ENST00000585278 85 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 uc_338.28-201ENST00000612082 187 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.13□□□□□ -2.43
FOXF1Q12946 AC105081.1-201ENST00000617727 106 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 AC090971.5-201ENST00000621102 293 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 AC021613.1-201ENST00000623880 111 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 AC067863.3-201ENST00000624172 122 ntBASIC-0.13□□□□□ -2.43
FOXF1Q12946 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
FOXF1Q12946 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 RNA5SP205-201ENST00000364653 136 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 SNORD42.2-201ENST00000365570 69 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 SNORA32-201ENST00000384072 121 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 MIR7-2-201ENST00000384970 110 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.14□□□□□ -2.43
FOXF1Q12946 BX276092.1-201ENST00000427368 251 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 RNU6-893P-201ENST00000458841 100 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 RNA5SP484-201ENST00000458857 111 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 RNY3P16-201ENST00000516338 101 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 SCARNA15-202ENST00000516881 127 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 RNU6-570P-201ENST00000517051 105 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 DEFB131E-201ENST00000532329 154 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 AL442663.2-201ENST00000554385 511 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 AC138749.4-201ENST00000563970 127 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 MIR548AG2-201ENST00000581228 64 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 AL162376.1-201ENST00000624117 175 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 U6.109-201ENST00000636749 87 ntBASIC-0.14□□□□□ -2.43
FOXF1Q12946 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 SNORD114-12-201ENST00000365400 75 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 RNY3P14-201ENST00000384309 102 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 SNORA20-201ENST00000384662 132 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 AC097510.1-201ENST00000510945 133 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 MIR4643-201ENST00000577473 78 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 AL365205.2-201ENST00000594586 68 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 MIR6514-201ENST00000622549 70 ntBASIC-0.15□□□□□ -2.43
FOXF1Q12946 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.16□□□□□ -2.43
FOXF1Q12946 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 RNA5SP403-201ENST00000363598 108 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 U8.6-201ENST00000364939 135 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 SNORA22B-201ENST00000383876 138 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 MIR196A2-201ENST00000385189 110 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 MIR616-201ENST00000385293 97 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 RNU6-101P-201ENST00000410323 104 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 TRAJ51-201ENST00000504127 63 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 RNU6-175P-201ENST00000516896 107 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 NAMPTP3-201ENST00000569273 224 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 MIR5706-201ENST00000579841 80 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 AL590491.3-201ENST00000610731 82 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 AL365265.1-201ENST00000621045 234 ntBASIC-0.16□□□□□ -2.44
FOXF1Q12946 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 RNU6-923P-201ENST00000364753 107 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 RNU6-480P-201ENST00000384332 107 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 MIR329-2-201ENST00000385029 84 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 MT-TD-201ENST00000387419 68 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 RNU4-43P-201ENST00000410628 137 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 AL161932.1-201ENST00000437408 146 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 SNORD2.1-201ENST00000458762 69 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 RNU7-104P-201ENST00000459398 79 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 RNU7-106P-201ENST00000459514 67 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 MTND3P22-201ENST00000510932 243 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 SERF1AP1-201ENST00000514575 187 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 SNORD67.1-201ENST00000516618 108 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 SNORA40.15-201ENST00000516884 107 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 RNU7-35P-201ENST00000517174 62 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
FOXF1Q12946 AL360085.1-201ENST00000604713 532 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.17□□□□□ -2.44
FOXF1Q12946 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms