Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
COL4A3Q01955 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
COL4A3Q01955 Y_RNA.342-201ENST00000365352 113 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 Y_RNA.433-201ENST00000384089 102 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 RNU6-679P-201ENST00000391003 106 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 MIR1270-201ENST00000459320 83 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 RNA5SP57-201ENST00000459463 123 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 RNU7-61P-201ENST00000515897 61 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 MIR151B-201ENST00000584249 96 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 AC096720.1-201ENST00000604441 183 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 AC012531.4-201ENST00000616509 177 ntBASIC1.72□□□□□ -2.13
COL4A3Q01955 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
COL4A3Q01955 RNU6-1123P-201ENST00000362347 106 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 RNU6-170P-201ENST00000362832 104 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 RNA5SP62-201ENST00000363457 110 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 SNORD45B-201ENST00000364617 72 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 RNU1-52P-201ENST00000384190 164 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 RNU6-644P-201ENST00000391155 98 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 RNA5SP212-201ENST00000391223 107 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 AC096949.1-201ENST00000412047 152 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 SNORA32-201ENST00000384072 121 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 MIR194-1-201ENST00000384892 85 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 RNU6-602P-201ENST00000411155 105 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 RNU7-193P-201ENST00000516723 65 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
COL4A3Q01955 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL4A3Q01955 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
COL4A3Q01955 SNORA16.1-201ENST00000364597 132 ntBASIC1.7□□□□□ -2.14
COL4A3Q01955 RNA5SP173-201ENST00000364857 136 ntBASIC1.7□□□□□ -2.14
COL4A3Q01955 MIR653-201ENST00000385279 96 ntBASIC1.7□□□□□ -2.14
COL4A3Q01955 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
COL4A3Q01955 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.7□□□□□ -2.14
COL4A3Q01955 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A3Q01955 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
COL4A3Q01955 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
COL4A3Q01955 Y_RNA.96-201ENST00000363092 109 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 RNU1-42P-201ENST00000364033 160 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 RNU6-60P-201ENST00000364792 103 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 SNORD38B-201ENST00000384690 67 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 AC004941.2-201ENST00000427009 228 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 RNU6-322P-201ENST00000516010 103 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 RNU7-79P-201ENST00000516082 62 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 RNU6-917P-201ENST00000516294 104 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 RNU2-19P-201ENST00000517288 84 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 AC062037.1-201ENST00000605302 128 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 SNORD38B-202ENST00000625943 69 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 Z97988.1-201ENST00000637697 135 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.69□□□□□ -2.14
COL4A3Q01955 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL4A3Q01955 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL4A3Q01955 RNU6-1134P-201ENST00000365156 101 ntBASIC1.68□□□□□ -2.14
COL4A3Q01955 RNU6-1237P-201ENST00000384777 107 ntBASIC1.68□□□□□ -2.14
COL4A3Q01955 HMGN2P38-201ENST00000423806 265 ntBASIC1.68□□□□□ -2.14
COL4A3Q01955 Y_RNA.659-201ENST00000515994 113 ntBASIC1.68□□□□□ -2.14
COL4A3Q01955 RNU7-2P-201ENST00000516096 62 ntBASIC1.68□□□□□ -2.14
COL4A3Q01955 RNU7-35P-201ENST00000517174 62 ntBASIC1.68□□□□□ -2.14
COL4A3Q01955 AC008133.2-201ENST00000624540 351 ntBASIC1.68□□□□□ -2.14
COL4A3Q01955 Y_RNA.190-201ENST00000363964 101 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 Y_RNA.290-201ENST00000364879 114 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 Y_RNA.377-201ENST00000365644 108 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 RNU6-573P-201ENST00000383938 106 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 RNU4-52P-201ENST00000384209 138 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 MRPL35P3-201ENST00000421557 364 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 AL353813.1-201ENST00000440700 253 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 AC121758.2-201ENST00000553271 193 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 MIR4777-201ENST00000583710 86 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 U7.3-201ENST00000616123 62 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL4A3Q01955 Y_RNA.95-201ENST00000363079 95 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 RNU6-1201P-201ENST00000384227 107 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 AL451046.2-201ENST00000403074 277 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 SNORD23.1-201ENST00000408212 104 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 RNU6-162P-201ENST00000516228 103 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 RNA5SP364-201ENST00000516938 78 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 CYP3A52P-201ENST00000563326 91 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.67□□□□□ -2.14
COL4A3Q01955 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
COL4A3Q01955 RNU6-1313P-201ENST00000362622 102 ntBASIC1.66□□□□□ -2.14
COL4A3Q01955 RNU6-972P-201ENST00000391208 107 ntBASIC1.66□□□□□ -2.14
COL4A3Q01955 RNU6-1086P-201ENST00000410930 100 ntBASIC1.66□□□□□ -2.14
COL4A3Q01955 AC055731.1-201ENST00000474387 401 ntBASIC1.66□□□□□ -2.14
COL4A3Q01955 MIR548Z-201ENST00000584743 97 ntBASIC1.66□□□□□ -2.14
COL4A3Q01955 AC245884.12-201ENST00000615364 59 ntBASIC1.66□□□□□ -2.14
COL4A3Q01955 AL157834.3-201ENST00000615543 103 ntBASIC1.66□□□□□ -2.14
COL4A3Q01955 MIR8065-201ENST00000620577 100 ntBASIC1.66□□□□□ -2.14
COL4A3Q01955 AC091304.10-201ENST00000641554 121 ntBASIC1.66□□□□□ -2.14
COL4A3Q01955 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL4A3Q01955 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL4A3Q01955 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.65□□□□□ -2.14
COL4A3Q01955 SNORA7.1-201ENST00000363750 139 ntBASIC1.65□□□□□ -2.15
COL4A3Q01955 RNU1-93P-201ENST00000364704 169 ntBASIC1.65□□□□□ -2.15
COL4A3Q01955 MIR206-201ENST00000384872 86 ntBASIC1.65□□□□□ -2.15
COL4A3Q01955 UBL5P1-201ENST00000507979 193 ntBASIC1.65□□□□□ -2.15
COL4A3Q01955 Y_RNA.681-201ENST00000516445 113 ntBASIC1.65□□□□□ -2.15
COL4A3Q01955 Y_RNA.705-201ENST00000516862 110 ntBASIC1.65□□□□□ -2.15
COL4A3Q01955 AC022254.1-201ENST00000567857 235 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 375.1 ms