Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC141846.1-201ENST00000568348 142 ntBASIC1.56□□□□□ -2.16
IRF9Q00978 Y_RNA.330-201ENST00000365230 109 ntBASIC1.55□□□□□ -2.16
IRF9Q00978 Y_RNA.363-201ENST00000365529 113 ntBASIC1.55□□□□□ -2.16
IRF9Q00978 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
IRF9Q00978 RNU6-816P-201ENST00000390914 107 ntBASIC1.55□□□□□ -2.16
IRF9Q00978 RNU6-1268P-201ENST00000391214 107 ntBASIC1.55□□□□□ -2.16
IRF9Q00978 RNU6-1239P-201ENST00000391310 107 ntBASIC1.55□□□□□ -2.16
IRF9Q00978 MIR1912-201ENST00000410389 80 ntBASIC1.55□□□□□ -2.16
IRF9Q00978 AC068339.1-201ENST00000526965 141 ntBASIC1.55□□□□□ -2.16
IRF9Q00978 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
IRF9Q00978 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
IRF9Q00978 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
IRF9Q00978 RNU6-1298P-201ENST00000362456 101 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 U8.6-201ENST00000364939 135 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 Y_RNA.323-201ENST00000365157 109 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 RNA5SP190-201ENST00000365222 118 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 Y_RNA.507-201ENST00000384500 99 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 RNU6-910P-201ENST00000390844 107 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 RNU6-1165P-201ENST00000410119 107 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 RPL39P25-201ENST00000449384 154 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 MIR5009-201ENST00000578736 100 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 uc_338.28-201ENST00000612082 187 ntBASIC1.54□□□□□ -2.16
IRF9Q00978 RNU6-363P-201ENST00000362895 105 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 Y_RNA.116-201ENST00000363292 103 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 Y_RNA.168-201ENST00000363740 102 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 RNU4-67P-201ENST00000364569 141 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 RNY1P13-201ENST00000365030 105 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 RNU6-580P-201ENST00000365159 107 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 RNU6-1014P-201ENST00000383940 103 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 AL591704.2-201ENST00000421658 181 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 SNORD67.1-201ENST00000516618 108 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.53□□□□□ -2.16
IRF9Q00978 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 RNU6-94P-201ENST00000607728 107 ntBASIC1.53□□□□□ -2.16
IRF9Q00978 MIR450A1-201ENST00000362262 91 ntBASIC1.52□□□□□ -2.17
IRF9Q00978 RNU6-106P-201ENST00000384405 107 ntBASIC1.52□□□□□ -2.17
IRF9Q00978 SNORA80D-201ENST00000384488 135 ntBASIC1.52□□□□□ -2.17
IRF9Q00978 SNORA2B-201ENST00000384583 137 ntBASIC1.52□□□□□ -2.17
IRF9Q00978 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.52□□□□□ -2.17
IRF9Q00978 RNU7-137P-201ENST00000516788 62 ntBASIC1.52□□□□□ -2.17
IRF9Q00978 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.52□□□□□ -2.17
IRF9Q00978 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
IRF9Q00978 MIR30D-201ENST00000362283 70 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 Y_RNA.155-201ENST00000363632 101 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 Y_RNA.163-201ENST00000363702 113 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 RNU6-949P-201ENST00000384040 107 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 MIR206-201ENST00000384872 86 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 SNORA67.5-201ENST00000391036 107 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 RNU6-554P-201ENST00000410466 106 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 AL603825.1-201ENST00000438481 80 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 RNU7-21P-201ENST00000459430 62 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 SNORD79.1-201ENST00000516069 84 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 RNU6-168P-201ENST00000516189 101 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 SNORA4-201ENST00000584302 138 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 uc_338.6-201ENST00000613544 171 ntBASIC1.51□□□□□ -2.17
IRF9Q00978 SNORD114-10-201ENST00000363409 72 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 RNU6-409P-201ENST00000384114 104 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 MT-TF-201ENST00000387314 71 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 RNA5SP89-201ENST00000410300 108 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 MRPL35P3-201ENST00000421557 364 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 AL031737.1-201ENST00000450125 223 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 RNU7-2P-201ENST00000516096 62 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 RNU6-521P-201ENST00000516663 105 ntBASIC1.5□□□□□ -2.17
IRF9Q00978 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
IRF9Q00978 SNORD113.3-201ENST00000364630 78 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 SNORD115-35-201ENST00000365122 82 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 MIR1302-5-201ENST00000408164 150 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 SNORA7.5-201ENST00000410672 110 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 RNU6-733P-201ENST00000410759 104 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 SNORA70.22-201ENST00000517160 124 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 AC036111.3-201ENST00000526389 112 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.49□□□□□ -2.17
IRF9Q00978 AC012676.2-201ENST00000619258 186 ntBASIC1.49□□□□□ -2.17
IRF9Q00978 Y_RNA.495-201ENST00000384435 112 ntBASIC1.48□□□□□ -2.17
IRF9Q00978 SNORA17.3-201ENST00000391159 129 ntBASIC1.48□□□□□ -2.17
IRF9Q00978 AC108667.1-201ENST00000428618 249 ntBASIC1.48□□□□□ -2.17
IRF9Q00978 RNU7-90P-201ENST00000459216 62 ntBASIC1.48□□□□□ -2.17
IRF9Q00978 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
IRF9Q00978 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.48□□□□□ -2.17
IRF9Q00978 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.48□□□□□ -2.17
IRF9Q00978 MIR18B-201ENST00000454574 71 ntBASIC1.47□□□□□ -2.17
IRF9Q00978 RNA5SP170-201ENST00000517150 101 ntBASIC1.47□□□□□ -2.17
IRF9Q00978 AC023827.1-201ENST00000569247 97 ntBASIC1.47□□□□□ -2.17
IRF9Q00978 AC106800.4-201ENST00000614905 153 ntBASIC1.47□□□□□ -2.17
IRF9Q00978 AC105081.1-201ENST00000617727 106 ntBASIC1.47□□□□□ -2.17
IRF9Q00978 Y_RNA.360-201ENST00000365512 102 ntBASIC1.46□□□□□ -2.18
IRF9Q00978 RNU6-32P-201ENST00000383948 107 ntBASIC1.46□□□□□ -2.18
IRF9Q00978 Y_RNA.448-201ENST00000384185 108 ntBASIC1.46□□□□□ -2.18
IRF9Q00978 RNU6-13P-201ENST00000384248 107 ntBASIC1.46□□□□□ -2.18
IRF9Q00978 RNU6-12P-201ENST00000384604 107 ntBASIC1.46□□□□□ -2.18
IRF9Q00978 RNU6-41P-201ENST00000384741 107 ntBASIC1.46□□□□□ -2.18
IRF9Q00978 MIR222-201ENST00000384992 110 ntBASIC1.46□□□□□ -2.18
IRF9Q00978 RNU6-1321P-201ENST00000390905 107 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms