Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR378A-201ENST00000362177 66 ntBASIC1.14□□□□□ -2.23
RAE1P78406 MIR30D-201ENST00000362283 70 ntBASIC1.14□□□□□ -2.23
RAE1P78406 SNORA7.1-201ENST00000363750 139 ntBASIC1.14□□□□□ -2.23
RAE1P78406 RNA5SP205-201ENST00000364653 136 ntBASIC1.14□□□□□ -2.23
RAE1P78406 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
RAE1P78406 SNORA32-201ENST00000384072 121 ntBASIC1.14□□□□□ -2.23
RAE1P78406 MT-TI-201ENST00000387365 69 ntBASIC1.14□□□□□ -2.23
RAE1P78406 RNU6-1154P-201ENST00000391001 104 ntBASIC1.14□□□□□ -2.23
RAE1P78406 AP1B1P2-201ENST00000416196 106 ntBASIC1.14□□□□□ -2.23
RAE1P78406 MIR18B-201ENST00000454574 71 ntBASIC1.14□□□□□ -2.23
RAE1P78406 AC108729.3-201ENST00000513484 108 ntBASIC1.14□□□□□ -2.23
RAE1P78406 SNORD33.1-201ENST00000516213 88 ntBASIC1.14□□□□□ -2.23
RAE1P78406 AC141846.1-201ENST00000568348 142 ntBASIC1.14□□□□□ -2.23
RAE1P78406 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.14□□□□□ -2.23
RAE1P78406 uc_338.6-201ENST00000613544 171 ntBASIC1.14□□□□□ -2.23
RAE1P78406 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
RAE1P78406 SNORA22C-201ENST00000384614 134 ntBASIC1.13□□□□□ -2.23
RAE1P78406 RNU6-1237P-201ENST00000384777 107 ntBASIC1.13□□□□□ -2.23
RAE1P78406 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.13□□□□□ -2.23
RAE1P78406 SNORD77B-201ENST00000391112 67 ntBASIC1.13□□□□□ -2.23
RAE1P78406 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.13□□□□□ -2.23
RAE1P78406 BTF3P4-201ENST00000418852 495 ntBASIC1.13□□□□□ -2.23
RAE1P78406 SNORA4-201ENST00000584302 138 ntBASIC1.13□□□□□ -2.23
RAE1P78406 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
RAE1P78406 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
RAE1P78406 Y_RNA.338-201ENST00000365320 114 ntBASIC1.12□□□□□ -2.23
RAE1P78406 Y_RNA.353-201ENST00000365440 108 ntBASIC1.12□□□□□ -2.23
RAE1P78406 RNU6-1081P-201ENST00000384537 107 ntBASIC1.12□□□□□ -2.23
RAE1P78406 MIR548I2-201ENST00000408348 149 ntBASIC1.12□□□□□ -2.23
RAE1P78406 MIR1270-201ENST00000459320 83 ntBASIC1.12□□□□□ -2.23
RAE1P78406 RNU6-94P-201ENST00000607728 107 ntBASIC1.12□□□□□ -2.23
RAE1P78406 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
RAE1P78406 RNU6-949P-201ENST00000384040 107 ntBASIC1.11□□□□□ -2.23
RAE1P78406 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
RAE1P78406 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
RAE1P78406 RNU6-994P-201ENST00000410507 111 ntBASIC1.11□□□□□ -2.23
RAE1P78406 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
RAE1P78406 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
RAE1P78406 AL353770.2-201ENST00000620024 78 ntBASIC1.11□□□□□ -2.23
RAE1P78406 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
RAE1P78406 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RAE1P78406 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.1□□□□□ -2.23
RAE1P78406 SNORD115-19-201ENST00000363098 82 ntBASIC1.1□□□□□ -2.23
RAE1P78406 SNORD115-18-201ENST00000363293 82 ntBASIC1.1□□□□□ -2.23
RAE1P78406 SNORD115-17-201ENST00000364612 82 ntBASIC1.1□□□□□ -2.23
RAE1P78406 RNY1P13-201ENST00000365030 105 ntBASIC1.1□□□□□ -2.23
RAE1P78406 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
RAE1P78406 RNU6-735P-201ENST00000410612 107 ntBASIC1.1□□□□□ -2.23
RAE1P78406 snoU13.21-201ENST00000459368 105 ntBASIC1.1□□□□□ -2.23
RAE1P78406 RNU7-79P-201ENST00000516082 62 ntBASIC1.1□□□□□ -2.23
RAE1P78406 RNU7-6P-201ENST00000516845 62 ntBASIC1.1□□□□□ -2.23
RAE1P78406 AL359881.1-201ENST00000602916 267 ntBASIC1.1□□□□□ -2.23
RAE1P78406 AL670379.3-201ENST00000605040 251 ntBASIC1.1□□□□□ -2.23
RAE1P78406 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.1□□□□□ -2.23
RAE1P78406 RNY4P6-201ENST00000363667 96 ntBASIC1.09□□□□□ -2.23
RAE1P78406 MIR200A-201ENST00000384875 90 ntBASIC1.09□□□□□ -2.23
RAE1P78406 MIR548D2-201ENST00000384955 97 ntBASIC1.09□□□□□ -2.23
RAE1P78406 MIR548A3-201ENST00000385297 97 ntBASIC1.09□□□□□ -2.23
RAE1P78406 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.09□□□□□ -2.23
RAE1P78406 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.09□□□□□ -2.23
RAE1P78406 SNORD83.1-201ENST00000411362 77 ntBASIC1.09□□□□□ -2.23
RAE1P78406 Y_RNA.649-201ENST00000459077 103 ntBASIC1.09□□□□□ -2.23
RAE1P78406 AC087741.2-201ENST00000619415 172 ntBASIC1.09□□□□□ -2.23
RAE1P78406 RNU6-834P-201ENST00000362367 110 ntBASIC1.08□□□□□ -2.24
RAE1P78406 Y_RNA.291-201ENST00000364886 113 ntBASIC1.08□□□□□ -2.24
RAE1P78406 RNU6-934P-201ENST00000365154 107 ntBASIC1.08□□□□□ -2.24
RAE1P78406 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
RAE1P78406 RPL39P25-201ENST00000449384 154 ntBASIC1.08□□□□□ -2.24
RAE1P78406 AC067940.1-201ENST00000458411 300 ntBASIC1.08□□□□□ -2.24
RAE1P78406 MIR1257-201ENST00000408490 117 ntBASIC1.07□□□□□ -2.24
RAE1P78406 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
RAE1P78406 RPS26P5-201ENST00000418544 335 ntBASIC1.07□□□□□ -2.24
RAE1P78406 AL603825.1-201ENST00000438481 80 ntBASIC1.07□□□□□ -2.24
RAE1P78406 RNU7-137P-201ENST00000516788 62 ntBASIC1.07□□□□□ -2.24
RAE1P78406 MIR4771-2-201ENST00000577758 74 ntBASIC1.07□□□□□ -2.24
RAE1P78406 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
RAE1P78406 MIR4771-1-201ENST00000582617 74 ntBASIC1.07□□□□□ -2.24
RAE1P78406 FAM71BP1-201ENST00000604431 523 ntBASIC1.07□□□□□ -2.24
RAE1P78406 SNORD114-10-201ENST00000363409 72 ntBASIC1.06□□□□□ -2.24
RAE1P78406 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.06□□□□□ -2.24
RAE1P78406 FABP5P4-201ENST00000437203 171 ntBASIC1.06□□□□□ -2.24
RAE1P78406 SNORD67.1-201ENST00000516618 108 ntBASIC1.06□□□□□ -2.24
RAE1P78406 MIR4679-2-201ENST00000578358 77 ntBASIC1.06□□□□□ -2.24
RAE1P78406 snoU13.31-201ENST00000607291 104 ntBASIC1.06□□□□□ -2.24
RAE1P78406 AL157834.3-201ENST00000615543 103 ntBASIC1.06□□□□□ -2.24
RAE1P78406 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.06□□□□□ -2.24
RAE1P78406 AL391516.1-201ENST00000554380 2449 ntBASIC1.06□□□□□ -2.24
RAE1P78406 RNU6-369P-201ENST00000362515 102 ntBASIC1.05□□□□□ -2.24
RAE1P78406 Y_RNA.273-201ENST00000364703 102 ntBASIC1.05□□□□□ -2.24
RAE1P78406 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
RAE1P78406 Y_RNA.362-201ENST00000365518 110 ntBASIC1.05□□□□□ -2.24
RAE1P78406 RNU6-1144P-201ENST00000384247 104 ntBASIC1.05□□□□□ -2.24
RAE1P78406 RNU6-616P-201ENST00000384353 107 ntBASIC1.05□□□□□ -2.24
RAE1P78406 RNU6-476P-201ENST00000384726 107 ntBASIC1.05□□□□□ -2.24
RAE1P78406 U8.15-201ENST00000390947 134 ntBASIC1.05□□□□□ -2.24
RAE1P78406 MIR1827-201ENST00000408549 66 ntBASIC1.05□□□□□ -2.24
RAE1P78406 RNU6-1064P-201ENST00000410626 104 ntBASIC1.05□□□□□ -2.24
RAE1P78406 RNU7-185P-201ENST00000459215 60 ntBASIC1.05□□□□□ -2.24
RAE1P78406 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
RAE1P78406 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms