Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 SNORD63B-201ENST00000411005 70 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 SNORA13-201ENST00000458790 133 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 AC002553.4-201ENST00000616896 331 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 U4.5-201ENST00000617137 123 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 MIR20A-201ENST00000362279 71 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 RNU4-90P-201ENST00000362773 141 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 MIR23A-201ENST00000385245 73 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 SNORA20.3-201ENST00000516880 132 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 MIR548AE2-201ENST00000583456 67 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 AC011603.4-201ENST00000611325 277 ntBASIC-1.22□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 RNU4-36P-201ENST00000364294 144 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 MIR196A1-201ENST00000388006 70 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 AL606845.1-201ENST00000404881 255 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 AC082651.2-201ENST00000496833 166 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 SNORD58B-201ENST00000607313 66 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 AP000770.2-201ENST00000623694 100 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 AL606534.2-204ENST00000635008 178 ntBASIC-1.23□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.24□□□□□ -2.61
HIST1H2BDP58876 RNY1P6-201ENST00000384193 109 ntBASIC-1.24□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.24□□□□□ -2.61
HIST1H2BDP58876 RNU6-559P-201ENST00000516151 98 ntBASIC-1.24□□□□□ -2.61
HIST1H2BDP58876 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.24□□□□□ -2.61
HIST1H2BDP58876 RNU6-570P-201ENST00000517051 105 ntBASIC-1.24□□□□□ -2.61
HIST1H2BDP58876 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.24□□□□□ -2.61
HIST1H2BDP58876 MIR376A1-201ENST00000616574 68 ntBASIC-1.24□□□□□ -2.61
HIST1H2BDP58876 PVT1_3.1-201ENST00000620853 95 ntBASIC-1.24□□□□□ -2.61
HIST1H2BDP58876 RNU6-845P-201ENST00000362578 103 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 RNY1-201ENST00000364228 113 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 SNORD115-44-201ENST00000365391 82 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 MT-TQ-201ENST00000387372 72 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 MIR1277-201ENST00000408536 78 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 AC098614.3-201ENST00000438957 440 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 snoU13.13-201ENST00000458842 104 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 RNU7-55P-201ENST00000459426 62 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 AC025253.1-201ENST00000613623 543 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 AC104985.2-201ENST00000620598 500 ntBASIC-1.25□□□□□ -2.61
HIST1H2BDP58876 RNU6-502P-201ENST00000362419 108 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 RNU6-170P-201ENST00000362832 104 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.164-201ENST00000363709 102 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 RNY1P7-201ENST00000384743 110 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 MT-TY-201ENST00000387409 66 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 RNU6-721P-201ENST00000410155 105 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 AC244090.1-201ENST00000441884 93 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 MTND4LP30-201ENST00000454092 297 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 AC069439.1-201ENST00000494739 167 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 RNU6-453P-201ENST00000516819 85 ntBASIC-1.26□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 SNORD115-46-201ENST00000390982 71 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 RNU7-48P-201ENST00000458875 63 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 MIR2113-201ENST00000459007 91 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 RNU7-106P-201ENST00000459514 67 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 SNORA27.4-201ENST00000516650 95 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 MTND4LP32-201ENST00000636111 270 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 MIR6759-201ENST00000638110 65 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 MTND5P18-201ENST00000445624 1801 ntBASIC-1.27□□□□□ -2.61
HIST1H2BDP58876 SNORA25.1-201ENST00000362326 128 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 SNORD81.2-201ENST00000365153 76 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 RNU1-115P-201ENST00000365329 160 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 MIR518B-201ENST00000385127 83 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 MIR1270-201ENST00000459320 83 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 MIR3179-1-201ENST00000578940 84 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 MIR3179-2-201ENST00000579107 84 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 MIR3179-3-201ENST00000579566 84 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 AC145423.2-201ENST00000610631 239 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 AC093783.1-201ENST00000612976 329 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 MIR3179-4-201ENST00000617599 84 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 AL109933.3-201ENST00000619095 188 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 AC022079.1-201ENST00000621546 602 ntBASIC-1.28□□□□□ -2.61
HIST1H2BDP58876 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.29□□□□□ -2.62
HIST1H2BDP58876 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.29□□□□□ -2.62
HIST1H2BDP58876 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.29□□□□□ -2.62
HIST1H2BDP58876 RNU6-211P-201ENST00000384047 107 ntBASIC-1.29□□□□□ -2.62
HIST1H2BDP58876 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.29□□□□□ -2.62
HIST1H2BDP58876 MIR616-201ENST00000385293 97 ntBASIC-1.29□□□□□ -2.62
HIST1H2BDP58876 SNORD83B-201ENST00000386745 93 ntBASIC-1.29□□□□□ -2.62
HIST1H2BDP58876 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.29□□□□□ -2.62
HIST1H2BDP58876 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms