Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNY1P13-201ENST00000365030 105 ntBASIC1.08□□□□□ -2.24
SUMO3P55854 RNU6-949P-201ENST00000384040 107 ntBASIC1.08□□□□□ -2.24
SUMO3P55854 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
SUMO3P55854 RNU7-185P-201ENST00000459215 60 ntBASIC1.08□□□□□ -2.24
SUMO3P55854 RNA5SP255-201ENST00000516370 107 ntBASIC1.08□□□□□ -2.24
SUMO3P55854 RNU6-971P-201ENST00000516920 106 ntBASIC1.08□□□□□ -2.24
SUMO3P55854 AC025627.3-201ENST00000582078 182 ntBASIC1.08□□□□□ -2.24
SUMO3P55854 AC023934.1-201ENST00000574529 2389 ntBASIC1.07□□□□□ -2.24
SUMO3P55854 MIR1263-201ENST00000408324 86 ntBASIC1.07□□□□□ -2.24
SUMO3P55854 RPL39P25-201ENST00000449384 154 ntBASIC1.07□□□□□ -2.24
SUMO3P55854 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
SUMO3P55854 UBL5P1-201ENST00000507979 193 ntBASIC1.07□□□□□ -2.24
SUMO3P55854 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
SUMO3P55854 AC020891.4-201ENST00000605745 93 ntBASIC1.07□□□□□ -2.24
SUMO3P55854 Y_RNA.198-201ENST00000364013 98 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 SNORA32-201ENST00000384072 121 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 RNU6-80P-201ENST00000384195 107 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 RNU6-1104P-201ENST00000384723 104 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 MIR1257-201ENST00000408490 117 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 TMSB4XP3-201ENST00000445144 114 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.06□□□□□ -2.24
SUMO3P55854 COX6CP6-201ENST00000490840 228 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 RNU6-977P-201ENST00000516411 103 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 MIR4676-201ENST00000583078 72 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.06□□□□□ -2.24
SUMO3P55854 SNORD58C-201ENST00000365223 64 ntBASIC1.05□□□□□ -2.24
SUMO3P55854 MIR125B2-201ENST00000385128 89 ntBASIC1.05□□□□□ -2.24
SUMO3P55854 MIRLET7F2-201ENST00000385277 83 ntBASIC1.05□□□□□ -2.24
SUMO3P55854 MIR759-201ENST00000390224 91 ntBASIC1.05□□□□□ -2.24
SUMO3P55854 AL603825.1-201ENST00000438481 80 ntBASIC1.05□□□□□ -2.24
SUMO3P55854 RNU6-781P-201ENST00000516377 101 ntBASIC1.05□□□□□ -2.24
SUMO3P55854 AC022523.2-201ENST00000561045 150 ntBASIC1.05□□□□□ -2.24
SUMO3P55854 RNU1-36P-201ENST00000365130 165 ntBASIC1.04□□□□□ -2.24
SUMO3P55854 RNU6-81P-201ENST00000365608 104 ntBASIC1.04□□□□□ -2.24
SUMO3P55854 U8.15-201ENST00000390947 134 ntBASIC1.04□□□□□ -2.24
SUMO3P55854 MIR938-201ENST00000401216 83 ntBASIC1.04□□□□□ -2.24
SUMO3P55854 SNORD93-201ENST00000408813 74 ntBASIC1.04□□□□□ -2.24
SUMO3P55854 RNU6-1061P-201ENST00000516530 99 ntBASIC1.04□□□□□ -2.24
SUMO3P55854 MIR4804-201ENST00000581683 73 ntBASIC1.04□□□□□ -2.24
SUMO3P55854 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
SUMO3P55854 Y_RNA.213-201ENST00000364178 111 ntBASIC1.03□□□□□ -2.24
SUMO3P55854 Y_RNA.528-201ENST00000384575 108 ntBASIC1.03□□□□□ -2.24
SUMO3P55854 SNORD77B-201ENST00000391112 67 ntBASIC1.03□□□□□ -2.24
SUMO3P55854 AC015818.7-201ENST00000428754 109 ntBASIC1.03□□□□□ -2.24
SUMO3P55854 AC087499.7-201ENST00000441958 109 ntBASIC1.03□□□□□ -2.24
SUMO3P55854 RNU7-56P-201ENST00000458744 62 ntBASIC1.03□□□□□ -2.24
SUMO3P55854 MIR4498-201ENST00000577599 66 ntBASIC1.03□□□□□ -2.24
SUMO3P55854 SNORD114-10-201ENST00000363409 72 ntBASIC1.02□□□□□ -2.25
SUMO3P55854 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SUMO3P55854 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
SUMO3P55854 MIR3163-201ENST00000581592 73 ntBASIC1.02□□□□□ -2.25
SUMO3P55854 AL359821.1-201ENST00000605519 182 ntBASIC1.02□□□□□ -2.25
SUMO3P55854 AC025166.1-201ENST00000612411 163 ntBASIC1.02□□□□□ -2.25
SUMO3P55854 RMST_2.1-201ENST00000617263 136 ntBASIC1.02□□□□□ -2.25
SUMO3P55854 Y_RNA.218-201ENST00000364218 104 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 RNU6-392P-201ENST00000364926 101 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 Y_RNA.346-201ENST00000365385 112 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 RNU6-959P-201ENST00000384671 107 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 MIR520F-201ENST00000384824 87 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 MIR1270-201ENST00000459320 83 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.01□□□□□ -2.25
SUMO3P55854 RNU6-772P-201ENST00000516042 105 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 RNU7-156P-201ENST00000517214 74 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.01□□□□□ -2.25
SUMO3P55854 AL589743.1-201ENST00000551932 2712 ntBASIC1□□□□□ -2.25
SUMO3P55854 Y_RNA.71-201ENST00000362892 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-364P-201ENST00000384387 107 ntBASIC1□□□□□ -2.25
SUMO3P55854 MT-TI-201ENST00000387365 69 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-447P-201ENST00000410293 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-1118P-201ENST00000410382 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-1076P-201ENST00000410397 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-355P-201ENST00000410427 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-791P-201ENST00000410467 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-705P-201ENST00000410601 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-1100P-201ENST00000410691 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-860P-201ENST00000410860 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-1217P-201ENST00000411276 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-785P-201ENST00000411324 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
SUMO3P55854 AC108729.3-201ENST00000513484 108 ntBASIC1□□□□□ -2.25
SUMO3P55854 SNORD67.1-201ENST00000516618 108 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU7-137P-201ENST00000516788 62 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU7-6P-201ENST00000516845 62 ntBASIC1□□□□□ -2.25
SUMO3P55854 RNU6-1234P-201ENST00000516877 103 ntBASIC1□□□□□ -2.25
SUMO3P55854 Y_RNA.712-201ENST00000517011 92 ntBASIC1□□□□□ -2.25
SUMO3P55854 MIR3910-1-201ENST00000580936 111 ntBASIC1□□□□□ -2.25
SUMO3P55854 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
SUMO3P55854 SNORD92-201ENST00000585078 85 ntBASIC1□□□□□ -2.25
SUMO3P55854 FAM71BP1-201ENST00000604431 523 ntBASIC1□□□□□ -2.25
SUMO3P55854 U6.90-201ENST00000614007 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 U6.70-201ENST00000620287 104 ntBASIC1□□□□□ -2.25
SUMO3P55854 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SUMO3P55854 MTND5P18-201ENST00000445624 1801 ntBASIC0.99□□□□□ -2.25
SUMO3P55854 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
SUMO3P55854 AL157777.2-201ENST00000258070 137 ntBASIC0.99□□□□□ -2.25
SUMO3P55854 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SUMO3P55854 RNU4-83P-201ENST00000410863 133 ntBASIC0.99□□□□□ -2.25
SUMO3P55854 AC096949.1-201ENST00000412047 152 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms