Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL157777.2-201ENST00000258070 137 ntBASIC1.02□□□□□ -2.25
CDH12P55289 Y_RNA.261-201ENST00000364631 102 ntBASIC1.02□□□□□ -2.25
CDH12P55289 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.02□□□□□ -2.25
CDH12P55289 RNU6-735P-201ENST00000410612 107 ntBASIC1.02□□□□□ -2.25
CDH12P55289 RNU4-69P-201ENST00000410677 143 ntBASIC1.02□□□□□ -2.25
CDH12P55289 AC015818.7-201ENST00000428754 109 ntBASIC1.02□□□□□ -2.25
CDH12P55289 AC087499.7-201ENST00000441958 109 ntBASIC1.02□□□□□ -2.25
CDH12P55289 MTND5P18-201ENST00000445624 1801 ntBASIC1.02□□□□□ -2.25
CDH12P55289 RNU7-40P-201ENST00000516397 64 ntBASIC1.02□□□□□ -2.25
CDH12P55289 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
CDH12P55289 MIR378A-201ENST00000362177 66 ntBASIC1.01□□□□□ -2.25
CDH12P55289 Y_RNA.198-201ENST00000364013 98 ntBASIC1.01□□□□□ -2.25
CDH12P55289 RNY1P13-201ENST00000365030 105 ntBASIC1.01□□□□□ -2.25
CDH12P55289 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.01□□□□□ -2.25
CDH12P55289 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
CDH12P55289 COX6CP6-201ENST00000490840 228 ntBASIC1.01□□□□□ -2.25
CDH12P55289 RNU7-79P-201ENST00000516082 62 ntBASIC1.01□□□□□ -2.25
CDH12P55289 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.01□□□□□ -2.25
CDH12P55289 MIR3914-2-201ENST00000637339 95 ntBASIC1.01□□□□□ -2.25
CDH12P55289 RNU6-369P-201ENST00000362515 102 ntBASIC1□□□□□ -2.25
CDH12P55289 RNU6-934P-201ENST00000365154 107 ntBASIC1□□□□□ -2.25
CDH12P55289 RNU6-994P-201ENST00000410507 111 ntBASIC1□□□□□ -2.25
CDH12P55289 RNU6-1086P-201ENST00000410930 100 ntBASIC1□□□□□ -2.25
CDH12P55289 MIR18B-201ENST00000454574 71 ntBASIC1□□□□□ -2.25
CDH12P55289 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
CDH12P55289 Y_RNA.299-201ENST00000364973 94 ntBASIC0.99□□□□□ -2.25
CDH12P55289 RNU6-22P-201ENST00000384355 107 ntBASIC0.99□□□□□ -2.25
CDH12P55289 RNU6-1117P-201ENST00000384525 104 ntBASIC0.99□□□□□ -2.25
CDH12P55289 MT-TF-201ENST00000387314 71 ntBASIC0.99□□□□□ -2.25
CDH12P55289 AL606753.1-201ENST00000427435 87 ntBASIC0.99□□□□□ -2.25
CDH12P55289 AC008267.6-201ENST00000441664 139 ntBASIC0.99□□□□□ -2.25
CDH12P55289 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.99□□□□□ -2.25
CDH12P55289 SNORA4-201ENST00000584302 138 ntBASIC0.99□□□□□ -2.25
CDH12P55289 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CDH12P55289 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
CDH12P55289 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
CDH12P55289 AL589743.1-201ENST00000551932 2712 ntBASIC0.98□□□□□ -2.25
CDH12P55289 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CDH12P55289 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CDH12P55289 Y_RNA.213-201ENST00000364178 111 ntBASIC0.98□□□□□ -2.25
CDH12P55289 Y_RNA.346-201ENST00000365385 112 ntBASIC0.98□□□□□ -2.25
CDH12P55289 RNU6-949P-201ENST00000384040 107 ntBASIC0.98□□□□□ -2.25
CDH12P55289 SNORA19-201ENST00000384737 128 ntBASIC0.98□□□□□ -2.25
CDH12P55289 U8.15-201ENST00000390947 134 ntBASIC0.98□□□□□ -2.25
CDH12P55289 AC096949.1-201ENST00000412047 152 ntBASIC0.98□□□□□ -2.25
CDH12P55289 RPS26P5-201ENST00000418544 335 ntBASIC0.98□□□□□ -2.25
CDH12P55289 RNU7-6P-201ENST00000516845 62 ntBASIC0.98□□□□□ -2.25
CDH12P55289 MIR4771-2-201ENST00000577758 74 ntBASIC0.98□□□□□ -2.25
CDH12P55289 MIR4771-1-201ENST00000582617 74 ntBASIC0.98□□□□□ -2.25
CDH12P55289 AL359881.1-201ENST00000602916 267 ntBASIC0.98□□□□□ -2.25
CDH12P55289 AC020891.4-201ENST00000605745 93 ntBASIC0.98□□□□□ -2.25
CDH12P55289 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.98□□□□□ -2.25
CDH12P55289 AC087741.2-201ENST00000619415 172 ntBASIC0.98□□□□□ -2.25
CDH12P55289 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CDH12P55289 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CDH12P55289 MIR200A-201ENST00000384875 90 ntBASIC0.97□□□□□ -2.25
CDH12P55289 SNORD33.1-201ENST00000516213 88 ntBASIC0.97□□□□□ -2.25
CDH12P55289 SNORD67.1-201ENST00000516618 108 ntBASIC0.97□□□□□ -2.25
CDH12P55289 MIR3163-201ENST00000581592 73 ntBASIC0.97□□□□□ -2.25
CDH12P55289 AC023934.1-201ENST00000574529 2389 ntBASIC0.97□□□□□ -2.25
CDH12P55289 Y_RNA.563-201ENST00000384707 108 ntBASIC0.96□□□□□ -2.26
CDH12P55289 RNU6-1168P-201ENST00000390831 104 ntBASIC0.96□□□□□ -2.26
CDH12P55289 MIR942-201ENST00000401111 86 ntBASIC0.96□□□□□ -2.26
CDH12P55289 MIR1827-201ENST00000408549 66 ntBASIC0.96□□□□□ -2.26
CDH12P55289 RNU7-185P-201ENST00000459215 60 ntBASIC0.96□□□□□ -2.26
CDH12P55289 RNU7-137P-201ENST00000516788 62 ntBASIC0.96□□□□□ -2.26
CDH12P55289 MIR3124-201ENST00000582636 67 ntBASIC0.96□□□□□ -2.26
CDH12P55289 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
CDH12P55289 MIR6078-201ENST00000611069 100 ntBASIC0.96□□□□□ -2.26
CDH12P55289 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CDH12P55289 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
CDH12P55289 Y_RNA.353-201ENST00000365440 108 ntBASIC0.95□□□□□ -2.26
CDH12P55289 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
CDH12P55289 RNU6-616P-201ENST00000384353 107 ntBASIC0.95□□□□□ -2.26
CDH12P55289 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
CDH12P55289 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.95□□□□□ -2.26
CDH12P55289 RNU6-479P-201ENST00000516348 105 ntBASIC0.95□□□□□ -2.26
CDH12P55289 RNU6-62P-201ENST00000516526 102 ntBASIC0.95□□□□□ -2.26
CDH12P55289 MIR4676-201ENST00000583078 72 ntBASIC0.95□□□□□ -2.26
CDH12P55289 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
CDH12P55289 Y_RNA.773-201ENST00000607168 90 ntBASIC0.95□□□□□ -2.26
CDH12P55289 U6.95-201ENST00000636931 70 ntBASIC0.95□□□□□ -2.26
CDH12P55289 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
CDH12P55289 MIR100-201ENST00000385259 80 ntBASIC0.94□□□□□ -2.26
CDH12P55289 MIR759-201ENST00000390224 91 ntBASIC0.94□□□□□ -2.26
CDH12P55289 SNORD89-201ENST00000390981 114 ntBASIC0.94□□□□□ -2.26
CDH12P55289 SNORD77B-201ENST00000391112 67 ntBASIC0.94□□□□□ -2.26
CDH12P55289 FABP5P4-201ENST00000437203 171 ntBASIC0.94□□□□□ -2.26
CDH12P55289 AC067940.1-201ENST00000458411 300 ntBASIC0.94□□□□□ -2.26
CDH12P55289 RNU6-237P-201ENST00000515985 71 ntBASIC0.94□□□□□ -2.26
CDH12P55289 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
CDH12P55289 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.94□□□□□ -2.26
CDH12P55289 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.94□□□□□ -2.26
CDH12P55289 U2.22-201ENST00000636441 106 ntBASIC0.94□□□□□ -2.26
CDH12P55289 MIR1-1-201ENST00000362147 71 ntBASIC0.93□□□□□ -2.26
CDH12P55289 SNORD115-19-201ENST00000363098 82 ntBASIC0.93□□□□□ -2.26
CDH12P55289 SNORD115-18-201ENST00000363293 82 ntBASIC0.93□□□□□ -2.26
CDH12P55289 SNORD115-17-201ENST00000364612 82 ntBASIC0.93□□□□□ -2.26
CDH12P55289 RNA5SP205-201ENST00000364653 136 ntBASIC0.93□□□□□ -2.26
CDH12P55289 Y_RNA.344-201ENST00000365381 112 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms