Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
APOC4P55056 SNORD114-26-201ENST00000363543 72 ntBASIC0.3□□□□□ -2.36
APOC4P55056 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
APOC4P55056 Y_RNA.466-201ENST00000384294 113 ntBASIC0.3□□□□□ -2.36
APOC4P55056 RNU6-918P-201ENST00000391219 106 ntBASIC0.3□□□□□ -2.36
APOC4P55056 Y_RNA.588-201ENST00000391254 102 ntBASIC0.3□□□□□ -2.36
APOC4P55056 RNU6-1258P-201ENST00000516911 111 ntBASIC0.3□□□□□ -2.36
APOC4P55056 MIR3678-201ENST00000578455 94 ntBASIC0.3□□□□□ -2.36
APOC4P55056 MIR4503-201ENST00000582187 83 ntBASIC0.3□□□□□ -2.36
APOC4P55056 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.3□□□□□ -2.36
APOC4P55056 SNORA25.7-201ENST00000364375 127 ntBASIC0.29□□□□□ -2.36
APOC4P55056 RNU4-16P-201ENST00000364737 141 ntBASIC0.29□□□□□ -2.36
APOC4P55056 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
APOC4P55056 RNU6-1336P-201ENST00000383886 109 ntBASIC0.29□□□□□ -2.36
APOC4P55056 RNU6-949P-201ENST00000384040 107 ntBASIC0.29□□□□□ -2.36
APOC4P55056 Y_RNA.447-201ENST00000384184 113 ntBASIC0.29□□□□□ -2.36
APOC4P55056 MIR193B-201ENST00000384907 83 ntBASIC0.29□□□□□ -2.36
APOC4P55056 Y_RNA.617-201ENST00000410920 90 ntBASIC0.29□□□□□ -2.36
APOC4P55056 MTND3P2-201ENST00000438452 342 ntBASIC0.29□□□□□ -2.36
APOC4P55056 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.29□□□□□ -2.36
APOC4P55056 Y_RNA.757-201ENST00000578934 114 ntBASIC0.29□□□□□ -2.36
APOC4P55056 MIR4491-201ENST00000581087 68 ntBASIC0.29□□□□□ -2.36
APOC4P55056 Y_RNA.13-201ENST00000362403 112 ntBASIC0.28□□□□□ -2.36
APOC4P55056 Y_RNA.193-201ENST00000363979 102 ntBASIC0.28□□□□□ -2.36
APOC4P55056 Y_RNA.435-201ENST00000384095 112 ntBASIC0.28□□□□□ -2.36
APOC4P55056 SNORA18-201ENST00000384416 132 ntBASIC0.28□□□□□ -2.36
APOC4P55056 RPL39P25-201ENST00000449384 154 ntBASIC0.28□□□□□ -2.36
APOC4P55056 RNU6-893P-201ENST00000458841 100 ntBASIC0.28□□□□□ -2.36
APOC4P55056 AP003327.1-201ENST00000529684 127 ntBASIC0.28□□□□□ -2.36
APOC4P55056 MIR4431-201ENST00000579990 94 ntBASIC0.28□□□□□ -2.36
APOC4P55056 MIR4719-201ENST00000585233 84 ntBASIC0.28□□□□□ -2.36
APOC4P55056 MIR6082-201ENST00000613604 109 ntBASIC0.28□□□□□ -2.36
APOC4P55056 RNU6-349P-201ENST00000362402 107 ntBASIC0.27□□□□□ -2.37
APOC4P55056 SNORA20.1-201ENST00000364790 130 ntBASIC0.27□□□□□ -2.37
APOC4P55056 RNU6-702P-201ENST00000364982 107 ntBASIC0.27□□□□□ -2.37
APOC4P55056 Y_RNA.307-201ENST00000365022 117 ntBASIC0.27□□□□□ -2.37
APOC4P55056 RNY1P13-201ENST00000365030 105 ntBASIC0.27□□□□□ -2.37
APOC4P55056 RNY1P6-201ENST00000384193 109 ntBASIC0.27□□□□□ -2.37
APOC4P55056 MIR518A1-201ENST00000385068 85 ntBASIC0.27□□□□□ -2.37
APOC4P55056 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
APOC4P55056 RNU6-1086P-201ENST00000410930 100 ntBASIC0.27□□□□□ -2.37
APOC4P55056 SNORA40.8-201ENST00000411034 126 ntBASIC0.27□□□□□ -2.37
APOC4P55056 RNU5E-9P-201ENST00000411164 104 ntBASIC0.27□□□□□ -2.37
APOC4P55056 RNA5SP236-201ENST00000516169 116 ntBASIC0.27□□□□□ -2.37
APOC4P55056 SNORA25.12-201ENST00000516202 82 ntBASIC0.27□□□□□ -2.37
APOC4P55056 AC133485.4-201ENST00000561835 220 ntBASIC0.27□□□□□ -2.37
APOC4P55056 MIR411-201ENST00000362239 96 ntBASIC0.26□□□□□ -2.37
APOC4P55056 Y_RNA.52-201ENST00000362760 96 ntBASIC0.26□□□□□ -2.37
APOC4P55056 RNU6-403P-201ENST00000363163 104 ntBASIC0.26□□□□□ -2.37
APOC4P55056 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
APOC4P55056 SNORD118-201ENST00000363593 134 ntBASIC0.26□□□□□ -2.37
APOC4P55056 Y_RNA.171-201ENST00000363760 102 ntBASIC0.26□□□□□ -2.37
APOC4P55056 RNU6-47P-201ENST00000383866 107 ntBASIC0.26□□□□□ -2.37
APOC4P55056 Y_RNA.452-201ENST00000384202 108 ntBASIC0.26□□□□□ -2.37
APOC4P55056 RNU6-196P-201ENST00000384315 107 ntBASIC0.26□□□□□ -2.37
APOC4P55056 Y_RNA.515-201ENST00000384535 112 ntBASIC0.26□□□□□ -2.37
APOC4P55056 Y_RNA.521-201ENST00000384560 114 ntBASIC0.26□□□□□ -2.37
APOC4P55056 RNU6-768P-201ENST00000384683 107 ntBASIC0.26□□□□□ -2.37
APOC4P55056 RNA5SP144-201ENST00000410846 116 ntBASIC0.26□□□□□ -2.37
APOC4P55056 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
APOC4P55056 uc_338.16-201ENST00000621804 95 ntBASIC0.26□□□□□ -2.37
APOC4P55056 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
APOC4P55056 Y_RNA.200-201ENST00000364018 102 ntBASIC0.25□□□□□ -2.37
APOC4P55056 RNU6-1082P-201ENST00000364574 107 ntBASIC0.25□□□□□ -2.37
APOC4P55056 SNORA8.2-201ENST00000384372 139 ntBASIC0.25□□□□□ -2.37
APOC4P55056 Y_RNA.540-201ENST00000384638 111 ntBASIC0.25□□□□□ -2.37
APOC4P55056 MIR644A-201ENST00000385262 94 ntBASIC0.25□□□□□ -2.37
APOC4P55056 RNU6-765P-201ENST00000516916 99 ntBASIC0.25□□□□□ -2.37
APOC4P55056 MIR1273G-201ENST00000577677 100 ntBASIC0.25□□□□□ -2.37
APOC4P55056 MIR3149-201ENST00000584629 83 ntBASIC0.25□□□□□ -2.37
APOC4P55056 SNORA25.18-201ENST00000607153 114 ntBASIC0.25□□□□□ -2.37
APOC4P55056 MIR103A1-201ENST00000362165 78 ntBASIC0.24□□□□□ -2.37
APOC4P55056 Y_RNA.83-201ENST00000363005 113 ntBASIC0.24□□□□□ -2.37
APOC4P55056 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
APOC4P55056 RNU6-574P-201ENST00000384265 107 ntBASIC0.24□□□□□ -2.37
APOC4P55056 Y_RNA.470-201ENST00000384307 117 ntBASIC0.24□□□□□ -2.37
APOC4P55056 Y_RNA.567-201ENST00000384736 106 ntBASIC0.24□□□□□ -2.37
APOC4P55056 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
APOC4P55056 RNU7-79P-201ENST00000516082 62 ntBASIC0.24□□□□□ -2.37
APOC4P55056 RNU7-35P-201ENST00000517174 62 ntBASIC0.24□□□□□ -2.37
APOC4P55056 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.24□□□□□ -2.37
APOC4P55056 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.24□□□□□ -2.37
APOC4P55056 AC099654.10-201ENST00000640395 161 ntBASIC0.24□□□□□ -2.37
APOC4P55056 Y_RNA.32-201ENST00000362589 110 ntBASIC0.23□□□□□ -2.37
APOC4P55056 SNORD115-2-201ENST00000362842 82 ntBASIC0.23□□□□□ -2.37
APOC4P55056 RNU6-312P-201ENST00000364629 107 ntBASIC0.23□□□□□ -2.37
APOC4P55056 SNORD115-20-201ENST00000365099 82 ntBASIC0.23□□□□□ -2.37
APOC4P55056 AL512326.2-201ENST00000426359 151 ntBASIC0.23□□□□□ -2.37
APOC4P55056 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
APOC4P55056 AC022523.2-201ENST00000561045 150 ntBASIC0.23□□□□□ -2.37
APOC4P55056 AC009779.6-201ENST00000603972 165 ntBASIC0.23□□□□□ -2.37
APOC4P55056 AC078938.1-201ENST00000620993 318 ntBASIC0.23□□□□□ -2.37
APOC4P55056 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
APOC4P55056 RNU6-463P-201ENST00000384340 107 ntBASIC0.22□□□□□ -2.37
APOC4P55056 RNU6-291P-201ENST00000384720 107 ntBASIC0.22□□□□□ -2.37
APOC4P55056 SNORD71-201ENST00000411292 86 ntBASIC0.22□□□□□ -2.37
APOC4P55056 RNU6-1219P-201ENST00000516143 112 ntBASIC0.22□□□□□ -2.37
APOC4P55056 SNORA62.5-201ENST00000516634 120 ntBASIC0.22□□□□□ -2.37
APOC4P55056 SNORA31.14-201ENST00000516728 116 ntBASIC0.22□□□□□ -2.37
APOC4P55056 SNORA25.16-201ENST00000516741 121 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms