Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 Y_RNA.629-201ENST00000411368 105 ntBASIC1.33□□□□□ -2.2
COPB1P53618 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.33□□□□□ -2.2
COPB1P53618 SNORA31.2-201ENST00000516019 134 ntBASIC1.33□□□□□ -2.2
COPB1P53618 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.33□□□□□ -2.2
COPB1P53618 RNU6-1144P-201ENST00000384247 104 ntBASIC1.32□□□□□ -2.2
COPB1P53618 MT-TN-201ENST00000387400 73 ntBASIC1.32□□□□□ -2.2
COPB1P53618 MIR1270-201ENST00000459320 83 ntBASIC1.32□□□□□ -2.2
COPB1P53618 MIR2115-201ENST00000516657 100 ntBASIC1.32□□□□□ -2.2
COPB1P53618 RNA5SP102-201ENST00000516865 106 ntBASIC1.32□□□□□ -2.2
COPB1P53618 MIR6734-201ENST00000621166 68 ntBASIC1.32□□□□□ -2.2
COPB1P53618 RNU6-654P-201ENST00000364373 107 ntBASIC1.31□□□□□ -2.2
COPB1P53618 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
COPB1P53618 Y_RNA.466-201ENST00000384294 113 ntBASIC1.31□□□□□ -2.2
COPB1P53618 RNU6-613P-201ENST00000410412 108 ntBASIC1.31□□□□□ -2.2
COPB1P53618 RNU6-1064P-201ENST00000410626 104 ntBASIC1.31□□□□□ -2.2
COPB1P53618 Y_RNA.649-201ENST00000459077 103 ntBASIC1.31□□□□□ -2.2
COPB1P53618 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.31□□□□□ -2.2
COPB1P53618 AL670379.3-201ENST00000605040 251 ntBASIC1.31□□□□□ -2.2
COPB1P53618 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COPB1P53618 Y_RNA.213-201ENST00000364178 111 ntBASIC1.3□□□□□ -2.2
COPB1P53618 RNU6-580P-201ENST00000365159 107 ntBASIC1.3□□□□□ -2.2
COPB1P53618 RNU6-342P-201ENST00000384521 104 ntBASIC1.3□□□□□ -2.2
COPB1P53618 RNU6-429P-201ENST00000384582 108 ntBASIC1.3□□□□□ -2.2
COPB1P53618 RNU6-476P-201ENST00000384726 107 ntBASIC1.3□□□□□ -2.2
COPB1P53618 MIR489-201ENST00000384923 84 ntBASIC1.3□□□□□ -2.2
COPB1P53618 snoU13.2-201ENST00000459201 104 ntBASIC1.3□□□□□ -2.2
COPB1P53618 RNA5SP33-201ENST00000516687 98 ntBASIC1.3□□□□□ -2.2
COPB1P53618 MIR548AE2-201ENST00000583456 67 ntBASIC1.3□□□□□ -2.2
COPB1P53618 MIR4264-201ENST00000583520 66 ntBASIC1.3□□□□□ -2.2
COPB1P53618 SEPT14P17-201ENST00000617978 177 ntBASIC1.3□□□□□ -2.2
COPB1P53618 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
COPB1P53618 Y_RNA.299-201ENST00000364973 94 ntBASIC1.29□□□□□ -2.2
COPB1P53618 RNU6-1056P-201ENST00000383996 107 ntBASIC1.29□□□□□ -2.2
COPB1P53618 MIR563-201ENST00000385080 79 ntBASIC1.29□□□□□ -2.2
COPB1P53618 MIR548A3-201ENST00000385297 97 ntBASIC1.29□□□□□ -2.2
COPB1P53618 SNORA75.2-201ENST00000391138 150 ntBASIC1.29□□□□□ -2.2
COPB1P53618 SNORA75.3-201ENST00000391231 150 ntBASIC1.29□□□□□ -2.2
COPB1P53618 RNU4-69P-201ENST00000410677 143 ntBASIC1.29□□□□□ -2.2
COPB1P53618 MIR3163-201ENST00000581592 73 ntBASIC1.29□□□□□ -2.2
COPB1P53618 SNORA4-201ENST00000584302 138 ntBASIC1.29□□□□□ -2.2
COPB1P53618 AC087741.2-201ENST00000619415 172 ntBASIC1.29□□□□□ -2.2
COPB1P53618 MIR377-201ENST00000362145 69 ntBASIC1.28□□□□□ -2.2
COPB1P53618 MIR548A1-201ENST00000385041 97 ntBASIC1.28□□□□□ -2.2
COPB1P53618 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.28□□□□□ -2.2
COPB1P53618 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
COPB1P53618 RNU7-35P-201ENST00000517174 62 ntBASIC1.28□□□□□ -2.2
COPB1P53618 MIR6740-201ENST00000618268 113 ntBASIC1.28□□□□□ -2.2
COPB1P53618 RNY4P6-201ENST00000363667 96 ntBASIC1.27□□□□□ -2.21
COPB1P53618 SNORA18-201ENST00000384416 132 ntBASIC1.27□□□□□ -2.21
COPB1P53618 MIR588-201ENST00000384900 83 ntBASIC1.27□□□□□ -2.21
COPB1P53618 MIR759-201ENST00000390224 91 ntBASIC1.27□□□□□ -2.21
COPB1P53618 RNU6-910P-201ENST00000390844 107 ntBASIC1.27□□□□□ -2.21
COPB1P53618 RNA5SP95-201ENST00000410319 137 ntBASIC1.27□□□□□ -2.21
COPB1P53618 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
COPB1P53618 SNORD79.1-201ENST00000516069 84 ntBASIC1.27□□□□□ -2.21
COPB1P53618 RNU7-6P-201ENST00000516845 62 ntBASIC1.27□□□□□ -2.21
COPB1P53618 AC007012.1-201ENST00000567192 175 ntBASIC1.27□□□□□ -2.21
COPB1P53618 MTND5P34-201ENST00000568888 325 ntBASIC1.27□□□□□ -2.21
COPB1P53618 MIR4679-2-201ENST00000578358 77 ntBASIC1.27□□□□□ -2.21
COPB1P53618 AP000753.3-201ENST00000604083 169 ntBASIC1.27□□□□□ -2.21
COPB1P53618 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
COPB1P53618 RNU6-215P-201ENST00000365169 102 ntBASIC1.26□□□□□ -2.21
COPB1P53618 SNORD116-21-201ENST00000384507 92 ntBASIC1.26□□□□□ -2.21
COPB1P53618 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
COPB1P53618 MIR548D2-201ENST00000384955 97 ntBASIC1.26□□□□□ -2.21
COPB1P53618 RNU6-205P-201ENST00000390858 107 ntBASIC1.26□□□□□ -2.21
COPB1P53618 RNU7-21P-201ENST00000459430 62 ntBASIC1.26□□□□□ -2.21
COPB1P53618 MIR6129-201ENST00000616087 109 ntBASIC1.26□□□□□ -2.21
COPB1P53618 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.26□□□□□ -2.21
COPB1P53618 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.26□□□□□ -2.21
COPB1P53618 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
COPB1P53618 Y_RNA.35-201ENST00000362601 101 ntBASIC1.25□□□□□ -2.21
COPB1P53618 SNORD115-19-201ENST00000363098 82 ntBASIC1.25□□□□□ -2.21
COPB1P53618 SNORD115-18-201ENST00000363293 82 ntBASIC1.25□□□□□ -2.21
COPB1P53618 Y_RNA.168-201ENST00000363740 102 ntBASIC1.25□□□□□ -2.21
COPB1P53618 SNORD115-17-201ENST00000364612 82 ntBASIC1.25□□□□□ -2.21
COPB1P53618 Y_RNA.344-201ENST00000365381 112 ntBASIC1.25□□□□□ -2.21
COPB1P53618 SNORA32-201ENST00000384072 121 ntBASIC1.25□□□□□ -2.21
COPB1P53618 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
COPB1P53618 SNORD20-201ENST00000384550 80 ntBASIC1.25□□□□□ -2.21
COPB1P53618 Y_RNA.549-201ENST00000384657 102 ntBASIC1.25□□□□□ -2.21
COPB1P53618 RNU6-1086P-201ENST00000410930 100 ntBASIC1.25□□□□□ -2.21
COPB1P53618 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.25□□□□□ -2.21
COPB1P53618 RNU6-589P-201ENST00000516485 107 ntBASIC1.25□□□□□ -2.21
COPB1P53618 AC036111.3-201ENST00000526389 112 ntBASIC1.25□□□□□ -2.21
COPB1P53618 uc_338.6-201ENST00000613544 171 ntBASIC1.25□□□□□ -2.21
COPB1P53618 MIR30D-201ENST00000362283 70 ntBASIC1.24□□□□□ -2.21
COPB1P53618 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
COPB1P53618 RNU6-1325P-201ENST00000364905 105 ntBASIC1.24□□□□□ -2.21
COPB1P53618 Y_RNA.362-201ENST00000365518 110 ntBASIC1.24□□□□□ -2.21
COPB1P53618 RNU7-79P-201ENST00000516082 62 ntBASIC1.24□□□□□ -2.21
COPB1P53618 SNORA70.22-201ENST00000517160 124 ntBASIC1.24□□□□□ -2.21
COPB1P53618 AC141846.1-201ENST00000568348 142 ntBASIC1.24□□□□□ -2.21
COPB1P53618 AL662814.1-201ENST00000617364 121 ntBASIC1.24□□□□□ -2.21
COPB1P53618 AL035470.1-201ENST00000622571 220 ntBASIC1.24□□□□□ -2.21
COPB1P53618 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
COPB1P53618 Y_RNA.281-201ENST00000364774 94 ntBASIC1.23□□□□□ -2.21
COPB1P53618 RNU6-880P-201ENST00000384526 107 ntBASIC1.23□□□□□ -2.21
COPB1P53618 RNU6-1237P-201ENST00000384777 107 ntBASIC1.23□□□□□ -2.21
COPB1P53618 RNU7-62P-201ENST00000458856 62 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms