Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC015712.3-201ENST00000559380 164 ntBASIC2.32□□□□□ -2.04
USP11P51784 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
USP11P51784 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USP11P51784 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USP11P51784 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USP11P51784 RNA5SP276-201ENST00000362580 94 ntBASIC2.31□□□□□ -2.04
USP11P51784 Y_RNA.173-201ENST00000363776 113 ntBASIC2.31□□□□□ -2.04
USP11P51784 RNU6-865P-201ENST00000364772 107 ntBASIC2.31□□□□□ -2.04
USP11P51784 RNU6-24P-201ENST00000384440 107 ntBASIC2.31□□□□□ -2.04
USP11P51784 RPL31P63-201ENST00000422565 375 ntBASIC2.31□□□□□ -2.04
USP11P51784 AC108210.2-201ENST00000503681 201 ntBASIC2.31□□□□□ -2.04
USP11P51784 SNORA31.17-201ENST00000516953 127 ntBASIC2.31□□□□□ -2.04
USP11P51784 RNU6-90P-201ENST00000606352 106 ntBASIC2.31□□□□□ -2.04
USP11P51784 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.31□□□□□ -2.04
USP11P51784 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.31□□□□□ -2.04
USP11P51784 AP000553.5-201ENST00000641933 54 ntBASIC2.31□□□□□ -2.04
USP11P51784 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USP11P51784 AP000648.3-201ENST00000623539 4507 ntBASIC2.31□□□□□ -2.04
USP11P51784 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
USP11P51784 RNY1P13-201ENST00000365030 105 ntBASIC2.3□□□□□ -2.04
USP11P51784 RNU6-1237P-201ENST00000384777 107 ntBASIC2.3□□□□□ -2.04
USP11P51784 MIR520C-201ENST00000385005 87 ntBASIC2.3□□□□□ -2.04
USP11P51784 AC025033.1-201ENST00000463883 194 ntBASIC2.3□□□□□ -2.04
USP11P51784 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.3□□□□□ -2.04
USP11P51784 RNU6-65P-201ENST00000516332 98 ntBASIC2.3□□□□□ -2.04
USP11P51784 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USP11P51784 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USP11P51784 MIR764-201ENST00000390811 85 ntBASIC2.29□□□□□ -2.04
USP11P51784 SPINT5P-201ENST00000448174 155 ntBASIC2.29□□□□□ -2.04
USP11P51784 RNU7-48P-201ENST00000458875 63 ntBASIC2.29□□□□□ -2.04
USP11P51784 RNU6-717P-201ENST00000459076 104 ntBASIC2.29□□□□□ -2.04
USP11P51784 AC055731.1-201ENST00000474387 401 ntBASIC2.29□□□□□ -2.04
USP11P51784 RNA5SP445-201ENST00000515889 115 ntBASIC2.29□□□□□ -2.04
USP11P51784 RNU7-41P-201ENST00000515917 61 ntBASIC2.29□□□□□ -2.04
USP11P51784 RNU2-19P-201ENST00000517288 84 ntBASIC2.29□□□□□ -2.04
USP11P51784 AL513043.2-201ENST00000573941 143 ntBASIC2.29□□□□□ -2.04
USP11P51784 AC012676.2-201ENST00000619258 186 ntBASIC2.29□□□□□ -2.04
USP11P51784 U1.36-201ENST00000620684 176 ntBASIC2.29□□□□□ -2.04
USP11P51784 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USP11P51784 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USP11P51784 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USP11P51784 RNU6-1296P-201ENST00000383879 107 ntBASIC2.28□□□□□ -2.04
USP11P51784 RNU6-524P-201ENST00000384270 107 ntBASIC2.28□□□□□ -2.04
USP11P51784 MIR194-1-201ENST00000384892 85 ntBASIC2.28□□□□□ -2.04
USP11P51784 MIR17-201ENST00000385012 84 ntBASIC2.28□□□□□ -2.04
USP11P51784 RNU6-360P-201ENST00000390944 104 ntBASIC2.28□□□□□ -2.04
USP11P51784 Y_RNA.607-201ENST00000410597 98 ntBASIC2.28□□□□□ -2.04
USP11P51784 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.28□□□□□ -2.04
USP11P51784 CYP3A52P-201ENST00000563326 91 ntBASIC2.28□□□□□ -2.04
USP11P51784 MIR5089-201ENST00000580047 84 ntBASIC2.28□□□□□ -2.04
USP11P51784 Y_RNA.783-201ENST00000613546 102 ntBASIC2.28□□□□□ -2.04
USP11P51784 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USP11P51784 Y_RNA.94-201ENST00000363068 106 ntBASIC2.27□□□□□ -2.05
USP11P51784 Y_RNA.98-201ENST00000363109 102 ntBASIC2.27□□□□□ -2.05
USP11P51784 Y_RNA.316-201ENST00000365118 111 ntBASIC2.27□□□□□ -2.05
USP11P51784 MIR181B2-201ENST00000385004 89 ntBASIC2.27□□□□□ -2.05
USP11P51784 MIR653-201ENST00000385279 96 ntBASIC2.27□□□□□ -2.05
USP11P51784 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.27□□□□□ -2.05
USP11P51784 RNA5SP338-201ENST00000410495 85 ntBASIC2.27□□□□□ -2.05
USP11P51784 RNU1-40P-201ENST00000516816 164 ntBASIC2.27□□□□□ -2.05
USP11P51784 RNU1-97P-201ENST00000516872 164 ntBASIC2.27□□□□□ -2.05
USP11P51784 MIR4251-201ENST00000635819 61 ntBASIC2.27□□□□□ -2.05
USP11P51784 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
USP11P51784 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
USP11P51784 RNU6-1123P-201ENST00000362347 106 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNA5SP138-201ENST00000365098 114 ntBASIC2.26□□□□□ -2.05
USP11P51784 SNORA2B-201ENST00000384583 137 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-482P-201ENST00000391068 107 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-447P-201ENST00000410293 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-1118P-201ENST00000410382 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-1076P-201ENST00000410397 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-355P-201ENST00000410427 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-791P-201ENST00000410467 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-705P-201ENST00000410601 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-1100P-201ENST00000410691 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-860P-201ENST00000410860 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-1217P-201ENST00000411276 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNU6-785P-201ENST00000411324 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.26□□□□□ -2.05
USP11P51784 AL161932.1-201ENST00000437408 146 ntBASIC2.26□□□□□ -2.05
USP11P51784 RNA5SP233-201ENST00000459153 113 ntBASIC2.26□□□□□ -2.05
USP11P51784 U6.90-201ENST00000614007 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 U6.70-201ENST00000620287 104 ntBASIC2.26□□□□□ -2.05
USP11P51784 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USP11P51784 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USP11P51784 SNORA16B-201ENST00000364674 135 ntBASIC2.25□□□□□ -2.05
USP11P51784 RNA5SP160-201ENST00000364866 120 ntBASIC2.25□□□□□ -2.05
USP11P51784 SNORD38B-201ENST00000384690 67 ntBASIC2.25□□□□□ -2.05
USP11P51784 AL356379.1-201ENST00000414105 126 ntBASIC2.25□□□□□ -2.05
USP11P51784 AC244023.1-201ENST00000426884 112 ntBASIC2.25□□□□□ -2.05
USP11P51784 AC009474.2-201ENST00000451383 136 ntBASIC2.25□□□□□ -2.05
USP11P51784 AC019288.1-201ENST00000557918 224 ntBASIC2.25□□□□□ -2.05
USP11P51784 AC141846.1-201ENST00000568348 142 ntBASIC2.25□□□□□ -2.05
USP11P51784 MIR4287-201ENST00000579398 78 ntBASIC2.25□□□□□ -2.05
USP11P51784 AC242498.1-201ENST00000604134 111 ntBASIC2.25□□□□□ -2.05
USP11P51784 SNORD38B-202ENST00000625943 69 ntBASIC2.25□□□□□ -2.05
USP11P51784 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.24□□□□□ -2.05
USP11P51784 AC004965.1-201ENST00000413033 213 ntBASIC2.24□□□□□ -2.05
USP11P51784 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.24□□□□□ -2.05
USP11P51784 AP001362.1-201ENST00000625165 124 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms