Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 SNORD113.3-201ENST00000364630 78 ntBASIC1.17□□□□□ -2.22
VPS41P49754 Y_RNA.346-201ENST00000365385 112 ntBASIC1.17□□□□□ -2.22
VPS41P49754 MIR548I2-201ENST00000408348 149 ntBASIC1.17□□□□□ -2.22
VPS41P49754 RNU2-51P-201ENST00000410708 197 ntBASIC1.17□□□□□ -2.22
VPS41P49754 AP1B1P2-201ENST00000416196 106 ntBASIC1.17□□□□□ -2.22
VPS41P49754 RNU7-62P-201ENST00000458856 62 ntBASIC1.17□□□□□ -2.22
VPS41P49754 AL662814.1-201ENST00000617364 121 ntBASIC1.17□□□□□ -2.22
VPS41P49754 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
VPS41P49754 Y_RNA.299-201ENST00000364973 94 ntBASIC1.16□□□□□ -2.22
VPS41P49754 SNORA2B-201ENST00000384583 137 ntBASIC1.16□□□□□ -2.22
VPS41P49754 RNU6-1154P-201ENST00000391001 104 ntBASIC1.16□□□□□ -2.22
VPS41P49754 RNU4-69P-201ENST00000410677 143 ntBASIC1.16□□□□□ -2.22
VPS41P49754 RNU6-1086P-201ENST00000410930 100 ntBASIC1.16□□□□□ -2.22
VPS41P49754 SNORD33.1-201ENST00000516213 88 ntBASIC1.16□□□□□ -2.22
VPS41P49754 RNU6-313P-201ENST00000516317 112 ntBASIC1.16□□□□□ -2.22
VPS41P49754 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
VPS41P49754 AC141846.1-201ENST00000568348 142 ntBASIC1.16□□□□□ -2.22
VPS41P49754 AC023827.1-201ENST00000569247 97 ntBASIC1.16□□□□□ -2.22
VPS41P49754 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS41P49754 U6.95-201ENST00000636931 70 ntBASIC1.16□□□□□ -2.22
VPS41P49754 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
VPS41P49754 SNORD111-201ENST00000408139 94 ntBASIC1.15□□□□□ -2.23
VPS41P49754 RNU6-1165P-201ENST00000410119 107 ntBASIC1.15□□□□□ -2.23
VPS41P49754 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
VPS41P49754 AC063976.4-201ENST00000421971 163 ntBASIC1.15□□□□□ -2.23
VPS41P49754 snoU13.21-201ENST00000459368 105 ntBASIC1.15□□□□□ -2.23
VPS41P49754 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
VPS41P49754 AC087741.2-201ENST00000619415 172 ntBASIC1.15□□□□□ -2.23
VPS41P49754 Y_RNA.213-201ENST00000364178 111 ntBASIC1.14□□□□□ -2.23
VPS41P49754 SNORA32-201ENST00000384072 121 ntBASIC1.14□□□□□ -2.23
VPS41P49754 RNU6-1237P-201ENST00000384777 107 ntBASIC1.14□□□□□ -2.23
VPS41P49754 AC012676.2-201ENST00000619258 186 ntBASIC1.14□□□□□ -2.23
VPS41P49754 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VPS41P49754 RNY1P13-201ENST00000365030 105 ntBASIC1.13□□□□□ -2.23
VPS41P49754 MIR222-201ENST00000384992 110 ntBASIC1.13□□□□□ -2.23
VPS41P49754 RNU7-79P-201ENST00000516082 62 ntBASIC1.13□□□□□ -2.23
VPS41P49754 MIR3163-201ENST00000581592 73 ntBASIC1.13□□□□□ -2.23
VPS41P49754 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
VPS41P49754 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VPS41P49754 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
VPS41P49754 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.12□□□□□ -2.23
VPS41P49754 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.12□□□□□ -2.23
VPS41P49754 RNA5SP237-201ENST00000410414 113 ntBASIC1.12□□□□□ -2.23
VPS41P49754 MIR18B-201ENST00000454574 71 ntBASIC1.12□□□□□ -2.23
VPS41P49754 AC108729.3-201ENST00000513484 108 ntBASIC1.12□□□□□ -2.23
VPS41P49754 MIR3124-201ENST00000582636 67 ntBASIC1.12□□□□□ -2.23
VPS41P49754 MIR4781-201ENST00000585250 76 ntBASIC1.12□□□□□ -2.23
VPS41P49754 RNU6-94P-201ENST00000607728 107 ntBASIC1.12□□□□□ -2.23
VPS41P49754 RNU6-369P-201ENST00000362515 102 ntBASIC1.11□□□□□ -2.23
VPS41P49754 SNORD115-19-201ENST00000363098 82 ntBASIC1.11□□□□□ -2.23
VPS41P49754 SNORD115-18-201ENST00000363293 82 ntBASIC1.11□□□□□ -2.23
VPS41P49754 SNORD115-17-201ENST00000364612 82 ntBASIC1.11□□□□□ -2.23
VPS41P49754 RNU6-949P-201ENST00000384040 107 ntBASIC1.11□□□□□ -2.23
VPS41P49754 MT-TF-201ENST00000387314 71 ntBASIC1.11□□□□□ -2.23
VPS41P49754 AC096949.1-201ENST00000412047 152 ntBASIC1.11□□□□□ -2.23
VPS41P49754 Y_RNA.649-201ENST00000459077 103 ntBASIC1.11□□□□□ -2.23
VPS41P49754 RNU7-6P-201ENST00000516845 62 ntBASIC1.11□□□□□ -2.23
VPS41P49754 AL359881.1-201ENST00000602916 267 ntBASIC1.11□□□□□ -2.23
VPS41P49754 snoU13.31-201ENST00000607291 104 ntBASIC1.11□□□□□ -2.23
VPS41P49754 Y_RNA.291-201ENST00000364886 113 ntBASIC1.1□□□□□ -2.23
VPS41P49754 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
VPS41P49754 RNU6-1081P-201ENST00000384537 107 ntBASIC1.1□□□□□ -2.23
VPS41P49754 MIR548D2-201ENST00000384955 97 ntBASIC1.1□□□□□ -2.23
VPS41P49754 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS41P49754 SNORA4-201ENST00000584302 138 ntBASIC1.1□□□□□ -2.23
VPS41P49754 AL670379.3-201ENST00000605040 251 ntBASIC1.1□□□□□ -2.23
VPS41P49754 RNU6-834P-201ENST00000362367 110 ntBASIC1.09□□□□□ -2.23
VPS41P49754 RNY4P6-201ENST00000363667 96 ntBASIC1.09□□□□□ -2.23
VPS41P49754 Y_RNA.344-201ENST00000365381 112 ntBASIC1.09□□□□□ -2.23
VPS41P49754 MIR759-201ENST00000390224 91 ntBASIC1.09□□□□□ -2.23
VPS41P49754 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.09□□□□□ -2.23
VPS41P49754 SNORD83.1-201ENST00000411362 77 ntBASIC1.09□□□□□ -2.23
VPS41P49754 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
VPS41P49754 SNORD67.1-201ENST00000516618 108 ntBASIC1.09□□□□□ -2.23
VPS41P49754 RNU7-137P-201ENST00000516788 62 ntBASIC1.09□□□□□ -2.23
VPS41P49754 MIR4679-2-201ENST00000578358 77 ntBASIC1.09□□□□□ -2.23
VPS41P49754 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
VPS41P49754 Y_RNA.773-201ENST00000607168 90 ntBASIC1.09□□□□□ -2.23
VPS41P49754 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
VPS41P49754 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
VPS41P49754 RNU6-934P-201ENST00000365154 107 ntBASIC1.08□□□□□ -2.24
VPS41P49754 RNU6-1144P-201ENST00000384247 104 ntBASIC1.08□□□□□ -2.24
VPS41P49754 RNU6-616P-201ENST00000384353 107 ntBASIC1.08□□□□□ -2.24
VPS41P49754 MIR548A3-201ENST00000385297 97 ntBASIC1.08□□□□□ -2.24
VPS41P49754 U8.15-201ENST00000390947 134 ntBASIC1.08□□□□□ -2.24
VPS41P49754 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS41P49754 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS41P49754 Y_RNA.362-201ENST00000365518 110 ntBASIC1.07□□□□□ -2.24
VPS41P49754 SNORD77B-201ENST00000391112 67 ntBASIC1.07□□□□□ -2.24
VPS41P49754 RPS26P5-201ENST00000418544 335 ntBASIC1.07□□□□□ -2.24
VPS41P49754 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
VPS41P49754 AC007012.1-201ENST00000567192 175 ntBASIC1.07□□□□□ -2.24
VPS41P49754 FAM71BP1-201ENST00000604431 523 ntBASIC1.07□□□□□ -2.24
VPS41P49754 AC020891.4-201ENST00000605745 93 ntBASIC1.07□□□□□ -2.24
VPS41P49754 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.07□□□□□ -2.24
VPS41P49754 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.07□□□□□ -2.24
VPS41P49754 AL589743.1-201ENST00000551932 2712 ntBASIC1.06□□□□□ -2.24
VPS41P49754 MIR337-201ENST00000362281 93 ntBASIC1.06□□□□□ -2.24
VPS41P49754 SNORD114-10-201ENST00000363409 72 ntBASIC1.06□□□□□ -2.24
VPS41P49754 Y_RNA.273-201ENST00000364703 102 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms