Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 Y_RNA.281-201ENST00000364774 94 ntBASIC1.42□□□□□ -2.18
NPTX2P47972 RNU6-44P-201ENST00000384045 107 ntBASIC1.42□□□□□ -2.18
NPTX2P47972 SNORA18-201ENST00000384416 132 ntBASIC1.42□□□□□ -2.18
NPTX2P47972 SNORA40.6-201ENST00000391153 128 ntBASIC1.42□□□□□ -2.18
NPTX2P47972 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.42□□□□□ -2.18
NPTX2P47972 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
NPTX2P47972 MIR2115-201ENST00000516657 100 ntBASIC1.42□□□□□ -2.18
NPTX2P47972 RNU11-2P-201ENST00000516898 142 ntBASIC1.42□□□□□ -2.18
NPTX2P47972 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
NPTX2P47972 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
NPTX2P47972 Y_RNA.81-201ENST00000362997 102 ntBASIC1.41□□□□□ -2.18
NPTX2P47972 SNORA25.8-201ENST00000364831 128 ntBASIC1.41□□□□□ -2.18
NPTX2P47972 SNORA31.2-201ENST00000516019 134 ntBASIC1.41□□□□□ -2.18
NPTX2P47972 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.41□□□□□ -2.18
NPTX2P47972 AC019288.1-201ENST00000557918 224 ntBASIC1.41□□□□□ -2.18
NPTX2P47972 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.41□□□□□ -2.18
NPTX2P47972 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.18
NPTX2P47972 SNORD115-19-201ENST00000363098 82 ntBASIC1.4□□□□□ -2.19
NPTX2P47972 SNORD115-18-201ENST00000363293 82 ntBASIC1.4□□□□□ -2.19
NPTX2P47972 RNU6-654P-201ENST00000364373 107 ntBASIC1.4□□□□□ -2.19
NPTX2P47972 SNORD115-17-201ENST00000364612 82 ntBASIC1.4□□□□□ -2.19
NPTX2P47972 Y_RNA.338-201ENST00000365320 114 ntBASIC1.4□□□□□ -2.19
NPTX2P47972 MT-TN-201ENST00000387400 73 ntBASIC1.4□□□□□ -2.19
NPTX2P47972 RNU7-35P-201ENST00000517174 62 ntBASIC1.4□□□□□ -2.19
NPTX2P47972 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.4□□□□□ -2.19
NPTX2P47972 MIR4264-201ENST00000583520 66 ntBASIC1.4□□□□□ -2.19
NPTX2P47972 AL157834.3-201ENST00000615543 103 ntBASIC1.4□□□□□ -2.19
NPTX2P47972 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.39□□□□□ -2.19
NPTX2P47972 RNA5SP327-201ENST00000362494 101 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 Y_RNA.85-201ENST00000363014 111 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 SNORA63.5-201ENST00000363548 123 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 Y_RNA.363-201ENST00000365529 113 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 RNU6-1237P-201ENST00000384777 107 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 RNU6-205P-201ENST00000390858 107 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 RNA5SP95-201ENST00000410319 137 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 RNU6-613P-201ENST00000410412 108 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 snoU13.2-201ENST00000459201 104 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 AC108729.3-201ENST00000513484 108 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 AP000753.3-201ENST00000604083 169 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 AL359821.1-201ENST00000605519 182 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 Y_RNA.773-201ENST00000607168 90 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 AL589743.1-201ENST00000551932 2712 ntBASIC1.39□□□□□ -2.19
NPTX2P47972 SNORA22-201ENST00000383907 134 ntBASIC1.38□□□□□ -2.19
NPTX2P47972 MIR588-201ENST00000384900 83 ntBASIC1.38□□□□□ -2.19
NPTX2P47972 MIR618-201ENST00000385287 98 ntBASIC1.38□□□□□ -2.19
NPTX2P47972 SNORD77B-201ENST00000391112 67 ntBASIC1.38□□□□□ -2.19
NPTX2P47972 RNU6-412P-201ENST00000516434 106 ntBASIC1.38□□□□□ -2.19
NPTX2P47972 MIR6740-201ENST00000618268 113 ntBASIC1.38□□□□□ -2.19
NPTX2P47972 MIR1255B1-201ENST00000636325 63 ntBASIC1.38□□□□□ -2.19
NPTX2P47972 SNORA63.4-201ENST00000362763 126 ntBASIC1.37□□□□□ -2.19
NPTX2P47972 RNU6-1107P-201ENST00000364817 104 ntBASIC1.37□□□□□ -2.19
NPTX2P47972 RNU6-616P-201ENST00000384353 107 ntBASIC1.37□□□□□ -2.19
NPTX2P47972 SNORA75.2-201ENST00000391138 150 ntBASIC1.37□□□□□ -2.19
NPTX2P47972 SNORA75.3-201ENST00000391231 150 ntBASIC1.37□□□□□ -2.19
NPTX2P47972 RPL39P34-201ENST00000477141 156 ntBASIC1.37□□□□□ -2.19
NPTX2P47972 AL662814.1-201ENST00000617364 121 ntBASIC1.37□□□□□ -2.19
NPTX2P47972 SEPT14P17-201ENST00000617978 177 ntBASIC1.37□□□□□ -2.19
NPTX2P47972 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
NPTX2P47972 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
NPTX2P47972 MIR377-201ENST00000362145 69 ntBASIC1.36□□□□□ -2.19
NPTX2P47972 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
NPTX2P47972 MIR563-201ENST00000385080 79 ntBASIC1.36□□□□□ -2.19
NPTX2P47972 RNA5SP237-201ENST00000410414 113 ntBASIC1.36□□□□□ -2.19
NPTX2P47972 RNU6-1086P-201ENST00000410930 100 ntBASIC1.36□□□□□ -2.19
NPTX2P47972 RNU7-62P-201ENST00000458856 62 ntBASIC1.36□□□□□ -2.19
NPTX2P47972 RNU7-79P-201ENST00000516082 62 ntBASIC1.36□□□□□ -2.19
NPTX2P47972 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
NPTX2P47972 RNU6-755P-201ENST00000364400 103 ntBASIC1.35□□□□□ -2.19
NPTX2P47972 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
NPTX2P47972 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
NPTX2P47972 AC141846.1-201ENST00000568348 142 ntBASIC1.35□□□□□ -2.19
NPTX2P47972 uc_338.6-201ENST00000613544 171 ntBASIC1.35□□□□□ -2.19
NPTX2P47972 AL162726.3-218ENST00000636401 95 ntBASIC1.35□□□□□ -2.19
NPTX2P47972 Y_RNA.49-201ENST00000362714 112 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 U8.6-201ENST00000364939 135 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 RNY1P13-201ENST00000365030 105 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 Y_RNA.323-201ENST00000365157 109 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 RNU6-580P-201ENST00000365159 107 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 Y_RNA.330-201ENST00000365230 109 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 SNORA25-201ENST00000384384 134 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 RNU6-910P-201ENST00000390844 107 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 RNU6-816P-201ENST00000390914 107 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 RNU6-1268P-201ENST00000391214 107 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 RNU6-1239P-201ENST00000391310 107 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 RNU6-321P-201ENST00000410912 106 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 PDCD5P2-201ENST00000507570 312 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 RNU6-1053P-201ENST00000515930 101 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 AC068339.1-201ENST00000526965 141 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 FAM71BP1-201ENST00000604431 523 ntBASIC1.34□□□□□ -2.19
NPTX2P47972 Y_RNA.116-201ENST00000363292 103 ntBASIC1.33□□□□□ -2.2
NPTX2P47972 Y_RNA.309-201ENST00000365046 111 ntBASIC1.33□□□□□ -2.2
NPTX2P47972 RNU6-1165P-201ENST00000410119 107 ntBASIC1.33□□□□□ -2.2
NPTX2P47972 SNORD67.1-201ENST00000516618 108 ntBASIC1.33□□□□□ -2.2
NPTX2P47972 MIR5009-201ENST00000578736 100 ntBASIC1.33□□□□□ -2.2
NPTX2P47972 uc_338.28-201ENST00000612082 187 ntBASIC1.33□□□□□ -2.2
NPTX2P47972 MIR30D-201ENST00000362283 70 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 RNU6-363P-201ENST00000362895 105 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 Y_RNA.168-201ENST00000363740 102 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 RNU4-67P-201ENST00000364569 141 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms