Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU7-56P-201ENST00000458744 62 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 RNU7-185P-201ENST00000459215 60 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 RNU7-120P-201ENST00000459334 63 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 RNU7-121P-201ENST00000516604 62 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 MIR6844-201ENST00000637122 62 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 Y_RNA.52-201ENST00000362760 96 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 Y_RNA.257-201ENST00000364596 102 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNY1P6-201ENST00000384193 109 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 MIR520H-201ENST00000385126 88 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-447P-201ENST00000410293 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-1118P-201ENST00000410382 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-1076P-201ENST00000410397 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-355P-201ENST00000410427 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-791P-201ENST00000410467 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-705P-201ENST00000410601 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-1100P-201ENST00000410691 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-860P-201ENST00000410860 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-1217P-201ENST00000411276 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 RNU6-785P-201ENST00000411324 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 MTATP6P21-201ENST00000440681 189 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.6□□□□□ -2.31
NEDD4P46934 AC022559.1-201ENST00000520905 205 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 uc_338.6-201ENST00000613544 171 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 U6.90-201ENST00000614007 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 U6.70-201ENST00000620287 104 ntBASIC0.6□□□□□ -2.31
NEDD4P46934 SNORD114-23-201ENST00000363536 72 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 RNU4-84P-201ENST00000364200 139 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 RNU4-45P-201ENST00000365469 141 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 Y_RNA.785-201ENST00000384290 109 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 MIR193B-201ENST00000384907 83 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 MIR573-201ENST00000384964 99 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 RNU6-138P-201ENST00000515952 107 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 AL662814.1-201ENST00000617364 121 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 AC010487.4-201ENST00000637027 61 ntBASIC0.59□□□□□ -2.32
NEDD4P46934 RNU6-1082P-201ENST00000364574 107 ntBASIC0.58□□□□□ -2.32
NEDD4P46934 RNU6-1336P-201ENST00000383886 109 ntBASIC0.58□□□□□ -2.32
NEDD4P46934 Y_RNA.441-201ENST00000384123 112 ntBASIC0.58□□□□□ -2.32
NEDD4P46934 RNU6-364P-201ENST00000384387 107 ntBASIC0.58□□□□□ -2.32
NEDD4P46934 RNU5E-9P-201ENST00000411164 104 ntBASIC0.58□□□□□ -2.32
NEDD4P46934 Y_RNA.662-201ENST00000516028 97 ntBASIC0.58□□□□□ -2.32
NEDD4P46934 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.58□□□□□ -2.32
NEDD4P46934 AC011603.4-201ENST00000611325 277 ntBASIC0.58□□□□□ -2.32
NEDD4P46934 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
NEDD4P46934 RNU6-1135P-201ENST00000411083 103 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 AC015818.7-201ENST00000428754 109 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 AC087499.7-201ENST00000441958 109 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 RPL39P25-201ENST00000449384 154 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.57□□□□□ -2.32
NEDD4P46934 RNA5SP236-201ENST00000516169 116 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 RNU7-156P-201ENST00000517214 74 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 SNORA81.3-201ENST00000517283 198 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 MIR1273G-201ENST00000577677 100 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 SNORD92-201ENST00000585078 85 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 DNAJC19P2-201ENST00000593340 302 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
NEDD4P46934 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
NEDD4P46934 RNU6-349P-201ENST00000362402 107 ntBASIC0.56□□□□□ -2.32
NEDD4P46934 Y_RNA.497-201ENST00000384447 98 ntBASIC0.56□□□□□ -2.32
NEDD4P46934 RNU6-1237P-201ENST00000384777 107 ntBASIC0.56□□□□□ -2.32
NEDD4P46934 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.56□□□□□ -2.32
NEDD4P46934 SNORD93-201ENST00000408813 74 ntBASIC0.56□□□□□ -2.32
NEDD4P46934 Y_RNA.757-201ENST00000578934 114 ntBASIC0.56□□□□□ -2.32
NEDD4P46934 SNORD37.2-201ENST00000391075 66 ntBASIC0.55□□□□□ -2.32
NEDD4P46934 RNA5SP144-201ENST00000410846 116 ntBASIC0.55□□□□□ -2.32
NEDD4P46934 RNU6-1086P-201ENST00000410930 100 ntBASIC0.55□□□□□ -2.32
NEDD4P46934 RNA5SP222-201ENST00000411039 105 ntBASIC0.55□□□□□ -2.32
NEDD4P46934 AL022718.1-201ENST00000412004 84 ntBASIC0.55□□□□□ -2.32
NEDD4P46934 RNU6-861P-201ENST00000516745 106 ntBASIC0.55□□□□□ -2.32
NEDD4P46934 AC141846.1-201ENST00000568348 142 ntBASIC0.55□□□□□ -2.32
NEDD4P46934 AC090897.1-201ENST00000580909 226 ntBASIC0.55□□□□□ -2.32
NEDD4P46934 AC004792.1-201ENST00000614523 137 ntBASIC0.55□□□□□ -2.32
NEDD4P46934 SNORD18B-201ENST00000365659 72 ntBASIC0.54□□□□□ -2.32
NEDD4P46934 RNU6-588P-201ENST00000410281 105 ntBASIC0.54□□□□□ -2.32
NEDD4P46934 RNU7-102P-201ENST00000458948 62 ntBASIC0.54□□□□□ -2.32
NEDD4P46934 RNU6-182P-201ENST00000516970 105 ntBASIC0.54□□□□□ -2.32
NEDD4P46934 AC243829.3-201ENST00000622177 108 ntBASIC0.54□□□□□ -2.32
NEDD4P46934 SNORD115-2-201ENST00000362842 82 ntBASIC0.53□□□□□ -2.32
NEDD4P46934 RNU6-682P-201ENST00000363843 106 ntBASIC0.53□□□□□ -2.32
NEDD4P46934 RNU4-16P-201ENST00000364737 141 ntBASIC0.53□□□□□ -2.32
NEDD4P46934 SNORD115-20-201ENST00000365099 82 ntBASIC0.53□□□□□ -2.32
NEDD4P46934 SNORA18-201ENST00000384416 132 ntBASIC0.53□□□□□ -2.32
NEDD4P46934 SNORD100-201ENST00000408573 76 ntBASIC0.53□□□□□ -2.32
NEDD4P46934 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
NEDD4P46934 MIR3612-201ENST00000579753 87 ntBASIC0.53□□□□□ -2.32
NEDD4P46934 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
NEDD4P46934 RNA5SP457-201ENST00000363657 124 ntBASIC0.52□□□□□ -2.33
NEDD4P46934 RNU6-690P-201ENST00000365242 106 ntBASIC0.52□□□□□ -2.33
NEDD4P46934 RNU6-949P-201ENST00000384040 107 ntBASIC0.52□□□□□ -2.33
NEDD4P46934 Y_RNA.584-201ENST00000391090 114 ntBASIC0.52□□□□□ -2.33
NEDD4P46934 RNU4-83P-201ENST00000410863 133 ntBASIC0.52□□□□□ -2.33
NEDD4P46934 RNU7-113P-201ENST00000459273 62 ntBASIC0.52□□□□□ -2.33
NEDD4P46934 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.52□□□□□ -2.33
NEDD4P46934 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.52□□□□□ -2.33
NEDD4P46934 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.52□□□□□ -2.33
NEDD4P46934 MIR18A-201ENST00000362310 71 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms