Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNORA26.6-201ENST00000391256 115 ntBASIC1.29□□□□□ -2.2
COL15A1P39059 AL022718.1-201ENST00000412004 84 ntBASIC1.29□□□□□ -2.2
COL15A1P39059 RPS29P28-201ENST00000446439 141 ntBASIC1.29□□□□□ -2.2
COL15A1P39059 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.29□□□□□ -2.2
COL15A1P39059 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL15A1P39059 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL15A1P39059 RNU6-647P-201ENST00000364243 107 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 Y_RNA.366-201ENST00000365540 102 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 SNORA75.2-201ENST00000391138 150 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 Y_RNA.586-201ENST00000391146 98 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 SNORA75.3-201ENST00000391231 150 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 RNU6-602P-201ENST00000411155 105 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 TMSB4XP3-201ENST00000445144 114 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 MIR4305-201ENST00000583252 102 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 AL137067.1-201ENST00000615933 120 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 MIR924-201ENST00000638017 53 ntBASIC1.28□□□□□ -2.2
COL15A1P39059 Y_RNA.363-201ENST00000365529 113 ntBASIC1.27□□□□□ -2.21
COL15A1P39059 Y_RNA.430-201ENST00000384081 110 ntBASIC1.27□□□□□ -2.21
COL15A1P39059 SNORA25-201ENST00000384384 134 ntBASIC1.27□□□□□ -2.21
COL15A1P39059 MIR532-201ENST00000385025 91 ntBASIC1.27□□□□□ -2.21
COL15A1P39059 RNU6-205P-201ENST00000390858 107 ntBASIC1.27□□□□□ -2.21
COL15A1P39059 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.27□□□□□ -2.21
COL15A1P39059 MIR3973-201ENST00000579824 107 ntBASIC1.27□□□□□ -2.21
COL15A1P39059 MIR4264-201ENST00000583520 66 ntBASIC1.27□□□□□ -2.21
COL15A1P39059 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.27□□□□□ -2.21
COL15A1P39059 RNU6-654P-201ENST00000364373 107 ntBASIC1.26□□□□□ -2.21
COL15A1P39059 SNORA2B-201ENST00000384583 137 ntBASIC1.26□□□□□ -2.21
COL15A1P39059 RNA5SP144-201ENST00000410846 116 ntBASIC1.26□□□□□ -2.21
COL15A1P39059 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
COL15A1P39059 RNU7-164P-201ENST00000459221 62 ntBASIC1.26□□□□□ -2.21
COL15A1P39059 SNORD79.1-201ENST00000516069 84 ntBASIC1.26□□□□□ -2.21
COL15A1P39059 RNU6-971P-201ENST00000516920 106 ntBASIC1.26□□□□□ -2.21
COL15A1P39059 AC108081.1-201ENST00000604358 221 ntBASIC1.26□□□□□ -2.21
COL15A1P39059 AC008163.1-202ENST00000636004 2889 ntBASIC1.26□□□□□ -2.21
COL15A1P39059 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
COL15A1P39059 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
COL15A1P39059 MT-TN-201ENST00000387400 73 ntBASIC1.25□□□□□ -2.21
COL15A1P39059 RNA5SP95-201ENST00000410319 137 ntBASIC1.25□□□□□ -2.21
COL15A1P39059 RNU6-613P-201ENST00000410412 108 ntBASIC1.25□□□□□ -2.21
COL15A1P39059 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.25□□□□□ -2.21
COL15A1P39059 AL158147.1-201ENST00000443970 75 ntBASIC1.25□□□□□ -2.21
COL15A1P39059 RNU7-113P-201ENST00000459273 62 ntBASIC1.25□□□□□ -2.21
COL15A1P39059 RNU7-21P-201ENST00000459430 62 ntBASIC1.25□□□□□ -2.21
COL15A1P39059 RNU6-235P-201ENST00000362644 107 ntBASIC1.24□□□□□ -2.21
COL15A1P39059 VTRNA1-3-201ENST00000365645 89 ntBASIC1.24□□□□□ -2.21
COL15A1P39059 SNORD12-201ENST00000391002 90 ntBASIC1.24□□□□□ -2.21
COL15A1P39059 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.24□□□□□ -2.21
COL15A1P39059 AC023827.1-201ENST00000569247 97 ntBASIC1.24□□□□□ -2.21
COL15A1P39059 SNORD12C-201ENST00000386307 89 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
COL15A1P39059 RNA5SP237-201ENST00000410414 113 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 AC063976.4-201ENST00000421971 163 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 AC244023.1-201ENST00000426884 112 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.23□□□□□ -2.21
COL15A1P39059 RN7SKP19-201ENST00000516016 252 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 RNU6-1061P-201ENST00000516530 99 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 CYP3A137P-201ENST00000562436 69 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 AC242498.1-201ENST00000604134 111 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 MIR6841-201ENST00000637129 72 ntBASIC1.23□□□□□ -2.21
COL15A1P39059 Y_RNA.171-201ENST00000363760 102 ntBASIC1.22□□□□□ -2.21
COL15A1P39059 SNORD113.3-201ENST00000364630 78 ntBASIC1.22□□□□□ -2.21
COL15A1P39059 RNU6-1237P-201ENST00000384777 107 ntBASIC1.22□□□□□ -2.21
COL15A1P39059 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
COL15A1P39059 RNU7-62P-201ENST00000458856 62 ntBASIC1.22□□□□□ -2.21
COL15A1P39059 AC103810.9-201ENST00000606688 112 ntBASIC1.22□□□□□ -2.21
COL15A1P39059 MIR6857-201ENST00000613267 93 ntBASIC1.22□□□□□ -2.21
COL15A1P39059 Y_RNA.298-201ENST00000364960 107 ntBASIC1.21□□□□□ -2.21
COL15A1P39059 MIR588-201ENST00000384900 83 ntBASIC1.21□□□□□ -2.21
COL15A1P39059 MIR1263-201ENST00000408324 86 ntBASIC1.21□□□□□ -2.21
COL15A1P39059 RNU2-35P-201ENST00000516446 142 ntBASIC1.21□□□□□ -2.21
COL15A1P39059 RNA5SP33-201ENST00000516687 98 ntBASIC1.21□□□□□ -2.21
COL15A1P39059 MIR377-201ENST00000362145 69 ntBASIC1.21□□□□□ -2.22
COL15A1P39059 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
COL15A1P39059 RNU4-61P-201ENST00000411243 107 ntBASIC1.21□□□□□ -2.22
COL15A1P39059 AL512326.2-201ENST00000426359 151 ntBASIC1.21□□□□□ -2.22
COL15A1P39059 AC113410.1-201ENST00000505029 247 ntBASIC1.21□□□□□ -2.22
COL15A1P39059 RNU7-123P-201ENST00000515911 60 ntBASIC1.21□□□□□ -2.22
COL15A1P39059 RNY4P20-201ENST00000516678 93 ntBASIC1.21□□□□□ -2.22
COL15A1P39059 AC004812.1-201ENST00000540773 146 ntBASIC1.21□□□□□ -2.22
COL15A1P39059 Y_RNA.168-201ENST00000363740 102 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 Y_RNA.531-201ENST00000384589 121 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 SNORD111-201ENST00000408139 94 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 RPL39P25-201ENST00000449384 154 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 snoU13.2-201ENST00000459201 104 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 MIR3910-1-201ENST00000580936 111 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 MIR8087-201ENST00000612745 78 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 AC132825.6-201ENST00000638861 357 ntBASIC1.2□□□□□ -2.22
COL15A1P39059 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL15A1P39059 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
COL15A1P39059 Y_RNA.280-201ENST00000364765 112 ntBASIC1.19□□□□□ -2.22
COL15A1P39059 RNU6-80P-201ENST00000384195 107 ntBASIC1.19□□□□□ -2.22
COL15A1P39059 MIR759-201ENST00000390224 91 ntBASIC1.19□□□□□ -2.22
COL15A1P39059 RNU6-1234P-201ENST00000516877 103 ntBASIC1.19□□□□□ -2.22
COL15A1P39059 RNU6-1258P-201ENST00000516911 111 ntBASIC1.19□□□□□ -2.22
COL15A1P39059 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.19□□□□□ -2.22
COL15A1P39059 SNORA18-201ENST00000384416 132 ntBASIC1.18□□□□□ -2.22
COL15A1P39059 RNA5SP136-201ENST00000410906 107 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms