Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RNU4-70P-201ENST00000384579 139 ntBASIC0.35□□□□□ -2.35
TRIM23P36406 Y_RNA.539-201ENST00000384635 107 ntBASIC0.35□□□□□ -2.35
TRIM23P36406 SNORD93-201ENST00000408813 74 ntBASIC0.35□□□□□ -2.35
TRIM23P36406 RNU5E-9P-201ENST00000411164 104 ntBASIC0.35□□□□□ -2.35
TRIM23P36406 SEPT7P4-201ENST00000437076 306 ntBASIC0.35□□□□□ -2.35
TRIM23P36406 RPL39P25-201ENST00000449384 154 ntBASIC0.35□□□□□ -2.35
TRIM23P36406 RNU2-4P-201ENST00000606190 192 ntBASIC0.35□□□□□ -2.35
TRIM23P36406 AC062037.2-201ENST00000610137 73 ntBASIC0.35□□□□□ -2.35
TRIM23P36406 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TRIM23P36406 RNU4-83P-201ENST00000410863 133 ntBASIC0.34□□□□□ -2.36
TRIM23P36406 MTND2P23-201ENST00000422990 651 ntBASIC0.34□□□□□ -2.36
TRIM23P36406 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
TRIM23P36406 RNU6-1023P-201ENST00000516137 106 ntBASIC0.34□□□□□ -2.36
TRIM23P36406 RNU6-765P-201ENST00000516916 99 ntBASIC0.34□□□□□ -2.36
TRIM23P36406 AC141846.1-201ENST00000568348 142 ntBASIC0.34□□□□□ -2.36
TRIM23P36406 MIR8066-201ENST00000617280 78 ntBASIC0.34□□□□□ -2.36
TRIM23P36406 U4.1-201ENST00000620349 87 ntBASIC0.34□□□□□ -2.36
TRIM23P36406 SNORD27-201ENST00000363981 72 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 MIR568-201ENST00000385036 95 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 RNU6-493P-201ENST00000391321 108 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 RNU6-1086P-201ENST00000410930 100 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
TRIM23P36406 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 RNY3P16-201ENST00000516338 101 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 RNU6-1149P-201ENST00000516810 97 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 MRPS18CP4-201ENST00000535821 231 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 MIR4308-201ENST00000580634 81 ntBASIC0.33□□□□□ -2.36
TRIM23P36406 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
TRIM23P36406 Y_RNA.182-201ENST00000363880 111 ntBASIC0.32□□□□□ -2.36
TRIM23P36406 Y_RNA.258-201ENST00000364613 105 ntBASIC0.32□□□□□ -2.36
TRIM23P36406 RNU6-949P-201ENST00000384040 107 ntBASIC0.32□□□□□ -2.36
TRIM23P36406 RNA5SP63-201ENST00000391225 112 ntBASIC0.32□□□□□ -2.36
TRIM23P36406 RNU6-135P-201ENST00000516769 101 ntBASIC0.32□□□□□ -2.36
TRIM23P36406 RNA5SP94-201ENST00000516917 108 ntBASIC0.32□□□□□ -2.36
TRIM23P36406 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.32□□□□□ -2.36
TRIM23P36406 Y_RNA.65-201ENST00000362846 100 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 Y_RNA.162-201ENST00000363683 102 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 Y_RNA.174-201ENST00000363781 105 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 Y_RNA.193-201ENST00000363979 102 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 MIR518A1-201ENST00000385068 85 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 U8.15-201ENST00000390947 134 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 MIR1197-201ENST00000408818 88 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 SNORD71-201ENST00000411292 86 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.31□□□□□ -2.36
TRIM23P36406 MIR3678-201ENST00000578455 94 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 MIR4431-201ENST00000579990 94 ntBASIC0.31□□□□□ -2.36
TRIM23P36406 RNY1P6-201ENST00000384193 109 ntBASIC0.3□□□□□ -2.36
TRIM23P36406 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
TRIM23P36406 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.3□□□□□ -2.36
TRIM23P36406 AC023932.2-201ENST00000603176 175 ntBASIC0.3□□□□□ -2.36
TRIM23P36406 MIR6082-201ENST00000613604 109 ntBASIC0.3□□□□□ -2.36
TRIM23P36406 RNU6-1099P-201ENST00000363533 107 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 RNU6-312P-201ENST00000364629 107 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 RNA5SP517-201ENST00000364724 117 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 RNU6-923P-201ENST00000364753 107 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 RNU6-679P-201ENST00000391003 106 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 Y_RNA.588-201ENST00000391254 102 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 SNORA25.12-201ENST00000516202 82 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 RNU6-1194P-201ENST00000516208 104 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 SCARNA15.1-201ENST00000516384 125 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 RNA5SP285-201ENST00000516619 119 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 Y_RNA.757-201ENST00000578934 114 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 MIR3128-201ENST00000581957 66 ntBASIC0.29□□□□□ -2.36
TRIM23P36406 SNORD115-2-201ENST00000362842 82 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 SNORD118-201ENST00000363593 134 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 SNORA20.1-201ENST00000364790 130 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 RNU6-702P-201ENST00000364982 107 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 SNORD115-20-201ENST00000365099 82 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 Y_RNA.412-201ENST00000384001 104 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 RNU6-918P-201ENST00000391219 106 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 RNU6-469P-201ENST00000516253 101 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 AC022523.2-201ENST00000561045 150 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 AC011603.4-201ENST00000611325 277 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 MTND5P32-201ENST00000560711 1802 ntBASIC0.28□□□□□ -2.36
TRIM23P36406 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
TRIM23P36406 SNORA18-201ENST00000384416 132 ntBASIC0.27□□□□□ -2.37
TRIM23P36406 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.27□□□□□ -2.37
TRIM23P36406 AC096949.1-201ENST00000412047 152 ntBASIC0.27□□□□□ -2.37
TRIM23P36406 MTND3P2-201ENST00000438452 342 ntBASIC0.27□□□□□ -2.37
TRIM23P36406 AL118496.2-201ENST00000448300 230 ntBASIC0.27□□□□□ -2.37
TRIM23P36406 MIR4491-201ENST00000581087 68 ntBASIC0.27□□□□□ -2.37
TRIM23P36406 U6.106-201ENST00000636360 105 ntBASIC0.27□□□□□ -2.37
TRIM23P36406 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.27□□□□□ -2.37
TRIM23P36406 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
TRIM23P36406 RNU6-349P-201ENST00000362402 107 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 Y_RNA.13-201ENST00000362403 112 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 Y_RNA.200-201ENST00000364018 102 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 RNY1P13-201ENST00000365030 105 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 Y_RNA.452-201ENST00000384202 108 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 Y_RNA.477-201ENST00000384352 108 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 SNORA8.2-201ENST00000384372 139 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 RNU6-35P-201ENST00000384530 107 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 Y_RNA.521-201ENST00000384560 114 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 RNA5SP144-201ENST00000410846 116 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 AL022718.1-201ENST00000412004 84 ntBASIC0.26□□□□□ -2.37
TRIM23P36406 AL512326.2-201ENST00000426359 151 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms