Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MIR1302-7-201ENST00000408841 72 ntBASIC2.77□□□□□ -1.97
CLCN1P35523 Y_RNA.607-201ENST00000410597 98 ntBASIC2.77□□□□□ -1.97
CLCN1P35523 RNU6-857P-201ENST00000515893 110 ntBASIC2.77□□□□□ -1.97
CLCN1P35523 AC015688.6-201ENST00000577737 104 ntBASIC2.77□□□□□ -1.97
CLCN1P35523 MIR4500-201ENST00000579472 76 ntBASIC2.77□□□□□ -1.97
CLCN1P35523 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.77□□□□□ -1.97
CLCN1P35523 AL773524.1-201ENST00000614065 229 ntBASIC2.77□□□□□ -1.97
CLCN1P35523 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.77□□□□□ -1.97
CLCN1P35523 SNORD115-27-201ENST00000364430 82 ntBASIC2.76□□□□□ -1.97
CLCN1P35523 AC244636.1-201ENST00000421152 228 ntBASIC2.76□□□□□ -1.97
CLCN1P35523 SNORD109B-201ENST00000458961 67 ntBASIC2.76□□□□□ -1.97
CLCN1P35523 SNORD109A-201ENST00000459128 67 ntBASIC2.76□□□□□ -1.97
CLCN1P35523 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.76□□□□□ -1.97
CLCN1P35523 MIR4264-201ENST00000583520 66 ntBASIC2.76□□□□□ -1.97
CLCN1P35523 SNORA4-201ENST00000584302 138 ntBASIC2.76□□□□□ -1.97
CLCN1P35523 MIR6740-201ENST00000618268 113 ntBASIC2.76□□□□□ -1.97
CLCN1P35523 U6.109-201ENST00000636749 87 ntBASIC2.76□□□□□ -1.97
CLCN1P35523 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLCN1P35523 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CLCN1P35523 MIRLET7G-201ENST00000362280 84 ntBASIC2.75□□□□□ -1.97
CLCN1P35523 RNU4-82P-201ENST00000362443 140 ntBASIC2.75□□□□□ -1.97
CLCN1P35523 RNA5SP37-201ENST00000365420 130 ntBASIC2.75□□□□□ -1.97
CLCN1P35523 RNU6-205P-201ENST00000390858 107 ntBASIC2.75□□□□□ -1.97
CLCN1P35523 RNA5SP184-201ENST00000411071 108 ntBASIC2.75□□□□□ -1.97
CLCN1P35523 AC138749.4-201ENST00000563970 127 ntBASIC2.75□□□□□ -1.97
CLCN1P35523 MIR4287-201ENST00000579398 78 ntBASIC2.75□□□□□ -1.97
CLCN1P35523 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLCN1P35523 SNORA16B-201ENST00000364674 135 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 MIR519C-201ENST00000385053 87 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 MIR563-201ENST00000385080 79 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 RNU6-519P-201ENST00000410590 108 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 AL513328.1-201ENST00000446460 224 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 AC108938.1-201ENST00000451204 136 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 MIR2115-201ENST00000516657 100 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 MIR4319-201ENST00000577285 85 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 SNORA77B-201ENST00000578179 125 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 MIR4448-201ENST00000584360 86 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 MIR8074-201ENST00000615081 81 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 MIR8066-201ENST00000617280 78 ntBASIC2.74□□□□□ -1.97
CLCN1P35523 AL596028.1-201ENST00000326971 197 ntBASIC2.73□□□□□ -1.97
CLCN1P35523 RNU6-24P-201ENST00000384440 107 ntBASIC2.73□□□□□ -1.97
CLCN1P35523 RNU6-1165P-201ENST00000410119 107 ntBASIC2.73□□□□□ -1.97
CLCN1P35523 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.73□□□□□ -1.97
CLCN1P35523 RNU6-250P-201ENST00000516958 103 ntBASIC2.73□□□□□ -1.97
CLCN1P35523 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.73□□□□□ -1.97
CLCN1P35523 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLCN1P35523 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
CLCN1P35523 Y_RNA.57-201ENST00000362806 113 ntBASIC2.72□□□□□ -1.97
CLCN1P35523 Y_RNA.221-201ENST00000364248 96 ntBASIC2.72□□□□□ -1.97
CLCN1P35523 RNU4-52P-201ENST00000384209 138 ntBASIC2.72□□□□□ -1.97
CLCN1P35523 RNU7-62P-201ENST00000458856 62 ntBASIC2.72□□□□□ -1.97
CLCN1P35523 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLCN1P35523 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLCN1P35523 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLCN1P35523 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CLCN1P35523 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.72□□□□□ -1.97
CLCN1P35523 RNA5SP133-201ENST00000363368 119 ntBASIC2.71□□□□□ -1.98
CLCN1P35523 SNORD115-37-201ENST00000363768 82 ntBASIC2.71□□□□□ -1.98
CLCN1P35523 RNU6-524P-201ENST00000384270 107 ntBASIC2.71□□□□□ -1.98
CLCN1P35523 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.71□□□□□ -1.98
CLCN1P35523 RNA5SP338-201ENST00000410495 85 ntBASIC2.71□□□□□ -1.98
CLCN1P35523 SNRPGP12-201ENST00000449481 213 ntBASIC2.71□□□□□ -1.98
CLCN1P35523 RN7SL274P-201ENST00000492268 272 ntBASIC2.71□□□□□ -1.98
CLCN1P35523 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.71□□□□□ -1.98
CLCN1P35523 MIR4713-201ENST00000582691 75 ntBASIC2.71□□□□□ -1.98
CLCN1P35523 MIR8063-201ENST00000621930 81 ntBASIC2.71□□□□□ -1.98
CLCN1P35523 ZNF658B-202ENST00000615961 3375 ntBASIC2.7□□□□□ -1.98
CLCN1P35523 AC062016.1-201ENST00000355719 319 ntBASIC2.7□□□□□ -1.98
CLCN1P35523 MIR30D-201ENST00000362283 70 ntBASIC2.7□□□□□ -1.98
CLCN1P35523 Y_RNA.119-201ENST00000363301 96 ntBASIC2.7□□□□□ -1.98
CLCN1P35523 RNA5SP456-201ENST00000364002 114 ntBASIC2.7□□□□□ -1.98
CLCN1P35523 AC093729.1-201ENST00000513074 128 ntBASIC2.7□□□□□ -1.98
CLCN1P35523 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CLCN1P35523 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
CLCN1P35523 Y_RNA.316-201ENST00000365118 111 ntBASIC2.69□□□□□ -1.98
CLCN1P35523 RNU4-83P-201ENST00000410863 133 ntBASIC2.69□□□□□ -1.98
CLCN1P35523 RNU6-850P-201ENST00000516934 103 ntBASIC2.69□□□□□ -1.98
CLCN1P35523 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLCN1P35523 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLCN1P35523 MIR196B-201ENST00000384852 84 ntBASIC2.68□□□□□ -1.98
CLCN1P35523 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
CLCN1P35523 MT-TN-201ENST00000387400 73 ntBASIC2.68□□□□□ -1.98
CLCN1P35523 BX276092.1-201ENST00000427368 251 ntBASIC2.68□□□□□ -1.98
CLCN1P35523 snoU13.25-201ENST00000458945 104 ntBASIC2.68□□□□□ -1.98
CLCN1P35523 AL133373.1-201ENST00000497098 94 ntBASIC2.68□□□□□ -1.98
CLCN1P35523 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLCN1P35523 RNU6-717P-201ENST00000459076 104 ntBASIC2.67□□□□□ -1.98
CLCN1P35523 RNU6-237P-201ENST00000515985 71 ntBASIC2.67□□□□□ -1.98
CLCN1P35523 RNA5SP320-201ENST00000516263 124 ntBASIC2.67□□□□□ -1.98
CLCN1P35523 MIR6516-201ENST00000630554 81 ntBASIC2.67□□□□□ -1.98
CLCN1P35523 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLCN1P35523 MIR103A2-201ENST00000362154 78 ntBASIC2.66□□□□□ -1.98
CLCN1P35523 RNU6-571P-201ENST00000384128 107 ntBASIC2.66□□□□□ -1.98
CLCN1P35523 MT-TF-201ENST00000387314 71 ntBASIC2.66□□□□□ -1.98
CLCN1P35523 SNORD53-201ENST00000579969 78 ntBASIC2.66□□□□□ -1.98
CLCN1P35523 AC087499.7-201ENST00000441958 109 ntBASIC2.65□□□□□ -1.99
CLCN1P35523 RPL30P7-201ENST00000479312 323 ntBASIC2.65□□□□□ -1.99
CLCN1P35523 AC019288.1-201ENST00000557918 224 ntBASIC2.65□□□□□ -1.99
CLCN1P35523 MIR4299-201ENST00000577899 72 ntBASIC2.65□□□□□ -1.99
CLCN1P35523 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 1613 ms