Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 MIR194-1-201ENST00000384892 85 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-447P-201ENST00000410293 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-1118P-201ENST00000410382 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-1076P-201ENST00000410397 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-355P-201ENST00000410427 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-791P-201ENST00000410467 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-705P-201ENST00000410601 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 Y_RNA.609-201ENST00000410669 89 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-1100P-201ENST00000410691 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-860P-201ENST00000410860 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-1217P-201ENST00000411276 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU6-785P-201ENST00000411324 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 SPINT5P-201ENST00000448174 155 ntBASIC2.36□□□□□ -2.03
CDC27P30260 RNU7-48P-201ENST00000458875 63 ntBASIC2.36□□□□□ -2.03
CDC27P30260 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.36□□□□□ -2.03
CDC27P30260 RNU7-41P-201ENST00000515917 61 ntBASIC2.36□□□□□ -2.03
CDC27P30260 U6.90-201ENST00000614007 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 U6.70-201ENST00000620287 104 ntBASIC2.36□□□□□ -2.03
CDC27P30260 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.36□□□□□ -2.03
CDC27P30260 SNORD38B-202ENST00000625943 69 ntBASIC2.36□□□□□ -2.03
CDC27P30260 MIR548BB-201ENST00000626714 66 ntBASIC2.36□□□□□ -2.03
CDC27P30260 Y_RNA.98-201ENST00000363109 102 ntBASIC2.35□□□□□ -2.03
CDC27P30260 RNY1P13-201ENST00000365030 105 ntBASIC2.35□□□□□ -2.03
CDC27P30260 MIR653-201ENST00000385279 96 ntBASIC2.35□□□□□ -2.03
CDC27P30260 AC004965.1-201ENST00000413033 213 ntBASIC2.35□□□□□ -2.03
CDC27P30260 MIR4648-201ENST00000580107 72 ntBASIC2.35□□□□□ -2.03
CDC27P30260 MIR3935-201ENST00000583472 104 ntBASIC2.35□□□□□ -2.03
CDC27P30260 AL096840.1-201ENST00000603287 93 ntBASIC2.35□□□□□ -2.03
CDC27P30260 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDC27P30260 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDC27P30260 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CDC27P30260 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CDC27P30260 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.34□□□□□ -2.03
CDC27P30260 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
CDC27P30260 RNU6-322P-201ENST00000516010 103 ntBASIC2.34□□□□□ -2.03
CDC27P30260 MIR4713-201ENST00000582691 75 ntBASIC2.34□□□□□ -2.03
CDC27P30260 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.34□□□□□ -2.03
CDC27P30260 AC012676.2-201ENST00000619258 186 ntBASIC2.34□□□□□ -2.03
CDC27P30260 RNU6-633P-201ENST00000362612 103 ntBASIC2.33□□□□□ -2.04
CDC27P30260 Y_RNA.173-201ENST00000363776 113 ntBASIC2.33□□□□□ -2.04
CDC27P30260 RNA5SP138-201ENST00000365098 114 ntBASIC2.33□□□□□ -2.04
CDC27P30260 SNORD38.2-201ENST00000384470 69 ntBASIC2.33□□□□□ -2.04
CDC27P30260 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDC27P30260 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.32□□□□□ -2.04
CDC27P30260 Y_RNA.221-201ENST00000364248 96 ntBASIC2.32□□□□□ -2.04
CDC27P30260 AC009474.2-201ENST00000451383 136 ntBASIC2.32□□□□□ -2.04
CDC27P30260 AC090255.1-201ENST00000495779 349 ntBASIC2.32□□□□□ -2.04
CDC27P30260 RNA5SP445-201ENST00000515889 115 ntBASIC2.32□□□□□ -2.04
CDC27P30260 RNU6-857P-201ENST00000515893 110 ntBASIC2.32□□□□□ -2.04
CDC27P30260 AC141846.1-201ENST00000568348 142 ntBASIC2.32□□□□□ -2.04
CDC27P30260 AP001362.1-201ENST00000625165 124 ntBASIC2.32□□□□□ -2.04
CDC27P30260 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDC27P30260 RNU6-613P-201ENST00000410412 108 ntBASIC2.31□□□□□ -2.04
CDC27P30260 RNA5SP237-201ENST00000410414 113 ntBASIC2.31□□□□□ -2.04
CDC27P30260 HMGN2P19-201ENST00000425149 265 ntBASIC2.31□□□□□ -2.04
CDC27P30260 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDC27P30260 MTND5P40-201ENST00000559945 246 ntBASIC2.31□□□□□ -2.04
CDC27P30260 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.31□□□□□ -2.04
CDC27P30260 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.31□□□□□ -2.04
CDC27P30260 AC020891.4-201ENST00000605745 93 ntBASIC2.31□□□□□ -2.04
CDC27P30260 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDC27P30260 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
CDC27P30260 MIR181B2-201ENST00000385004 89 ntBASIC2.3□□□□□ -2.04
CDC27P30260 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.3□□□□□ -2.04
CDC27P30260 AC027119.1-201ENST00000440877 241 ntBASIC2.3□□□□□ -2.04
CDC27P30260 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
CDC27P30260 AL513043.2-201ENST00000573941 143 ntBASIC2.3□□□□□ -2.04
CDC27P30260 AL359851.1-201ENST00000569460 4997 ntBASIC2.3□□□□□ -2.04
CDC27P30260 RNU6-652P-201ENST00000365488 107 ntBASIC2.29□□□□□ -2.04
CDC27P30260 MIR676-201ENST00000390702 67 ntBASIC2.29□□□□□ -2.04
CDC27P30260 AL161935.2-201ENST00000414627 60 ntBASIC2.29□□□□□ -2.04
CDC27P30260 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.29□□□□□ -2.04
CDC27P30260 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.29□□□□□ -2.04
CDC27P30260 SNORD115-27-201ENST00000364430 82 ntBASIC2.28□□□□□ -2.04
CDC27P30260 RNA5SP37-201ENST00000365420 130 ntBASIC2.28□□□□□ -2.04
CDC27P30260 RNA5SP259-201ENST00000365541 109 ntBASIC2.28□□□□□ -2.04
CDC27P30260 RNU6-24P-201ENST00000384440 107 ntBASIC2.28□□□□□ -2.04
CDC27P30260 SNORA2B-201ENST00000384583 137 ntBASIC2.28□□□□□ -2.04
CDC27P30260 Y_RNA.607-201ENST00000410597 98 ntBASIC2.28□□□□□ -2.04
CDC27P30260 AC244023.1-201ENST00000426884 112 ntBASIC2.28□□□□□ -2.04
CDC27P30260 AL161932.1-201ENST00000437408 146 ntBASIC2.28□□□□□ -2.04
CDC27P30260 snoU13.26-201ENST00000459452 105 ntBASIC2.28□□□□□ -2.04
CDC27P30260 RPL23AP42-201ENST00000471152 471 ntBASIC2.28□□□□□ -2.04
CDC27P30260 SNORD111.1-201ENST00000516421 86 ntBASIC2.28□□□□□ -2.04
CDC27P30260 RNU1-40P-201ENST00000516816 164 ntBASIC2.28□□□□□ -2.04
CDC27P30260 RNU1-97P-201ENST00000516872 164 ntBASIC2.28□□□□□ -2.04
CDC27P30260 AC242498.1-201ENST00000604134 111 ntBASIC2.28□□□□□ -2.04
CDC27P30260 AL662814.1-201ENST00000617364 121 ntBASIC2.28□□□□□ -2.04
CDC27P30260 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDC27P30260 MIR513A1-201ENST00000385138 129 ntBASIC2.27□□□□□ -2.05
CDC27P30260 SNORA44.1-201ENST00000517031 108 ntBASIC2.27□□□□□ -2.05
CDC27P30260 AC133485.1-201ENST00000567176 124 ntBASIC2.27□□□□□ -2.05
CDC27P30260 PRELID3BP2-201ENST00000605362 201 ntBASIC2.27□□□□□ -2.05
CDC27P30260 RNA5SP48-201ENST00000363969 126 ntBASIC2.26□□□□□ -2.05
CDC27P30260 RNU6-480P-201ENST00000384332 107 ntBASIC2.26□□□□□ -2.05
CDC27P30260 SNORD41-201ENST00000386967 70 ntBASIC2.26□□□□□ -2.05
CDC27P30260 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CDC27P30260 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDC27P30260 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDC27P30260 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms