Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 Z83846.1-201ENST00000446798 265 ntBASIC-0.82□□□□□ -2.54
SRMP19623 AC069439.1-201ENST00000494739 167 ntBASIC-0.82□□□□□ -2.54
SRMP19623 AC006006.1-201ENST00000603082 144 ntBASIC-0.82□□□□□ -2.54
SRMP19623 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.82□□□□□ -2.54
SRMP19623 SNORD114-14-201ENST00000362723 75 ntBASIC-0.83□□□□□ -2.54
SRMP19623 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.83□□□□□ -2.54
SRMP19623 RNU6-429P-201ENST00000384582 108 ntBASIC-0.83□□□□□ -2.54
SRMP19623 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.83□□□□□ -2.54
SRMP19623 AL731563.1-201ENST00000442202 214 ntBASIC-0.83□□□□□ -2.54
SRMP19623 SNRPGP8-201ENST00000454064 226 ntBASIC-0.83□□□□□ -2.54
SRMP19623 RNU7-74P-201ENST00000459104 62 ntBASIC-0.83□□□□□ -2.54
SRMP19623 RNU7-70P-201ENST00000516941 66 ntBASIC-0.83□□□□□ -2.54
SRMP19623 RNA5SP169-201ENST00000517268 117 ntBASIC-0.83□□□□□ -2.54
SRMP19623 IGKV1-22-201ENST00000524313 326 ntBASIC-0.83□□□□□ -2.54
SRMP19623 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.83□□□□□ -2.54
SRMP19623 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.83□□□□□ -2.54
SRMP19623 AC080013.6-201ENST00000606185 215 ntBASIC-0.83□□□□□ -2.54
SRMP19623 PART1_1.1-201ENST00000611761 217 ntBASIC-0.83□□□□□ -2.54
SRMP19623 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.84□□□□□ -2.54
SRMP19623 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.84□□□□□ -2.54
SRMP19623 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.84□□□□□ -2.54
SRMP19623 RNU6-507P-201ENST00000516045 100 ntBASIC-0.84□□□□□ -2.54
SRMP19623 AL365205.2-201ENST00000594586 68 ntBASIC-0.84□□□□□ -2.54
SRMP19623 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.84□□□□□ -2.54
SRMP19623 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.85□□□□□ -2.54
SRMP19623 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.85□□□□□ -2.55
SRMP19623 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.85□□□□□ -2.55
SRMP19623 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.85□□□□□ -2.55
SRMP19623 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.85□□□□□ -2.55
SRMP19623 SNORD81.2-201ENST00000365153 76 ntBASIC-0.85□□□□□ -2.55
SRMP19623 AC097635.1-201ENST00000450678 155 ntBASIC-0.85□□□□□ -2.55
SRMP19623 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.85□□□□□ -2.55
SRMP19623 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.85□□□□□ -2.55
SRMP19623 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.85□□□□□ -2.55
SRMP19623 MIR3129-201ENST00000581095 76 ntBASIC-0.85□□□□□ -2.55
SRMP19623 SNORD58B-201ENST00000607313 66 ntBASIC-0.85□□□□□ -2.55
SRMP19623 AC105081.1-201ENST00000617727 106 ntBASIC-0.85□□□□□ -2.55
SRMP19623 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.86□□□□□ -2.55
SRMP19623 RNY1P2-201ENST00000364820 117 ntBASIC-0.86□□□□□ -2.55
SRMP19623 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.86□□□□□ -2.55
SRMP19623 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.86□□□□□ -2.55
SRMP19623 RNU6-102P-201ENST00000384485 104 ntBASIC-0.86□□□□□ -2.55
SRMP19623 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
SRMP19623 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
SRMP19623 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
SRMP19623 SNORA3B-201ENST00000391305 131 ntBASIC-0.86□□□□□ -2.55
SRMP19623 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.86□□□□□ -2.55
SRMP19623 RNA5SP66-201ENST00000517178 101 ntBASIC-0.86□□□□□ -2.55
SRMP19623 AL008718.3-201ENST00000610217 321 ntBASIC-0.86□□□□□ -2.55
SRMP19623 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.86□□□□□ -2.55
SRMP19623 AC092794.1-201ENST00000612734 582 ntBASIC-0.86□□□□□ -2.55
SRMP19623 SNORD115-2-201ENST00000362842 82 ntBASIC-0.87□□□□□ -2.55
SRMP19623 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.87□□□□□ -2.55
SRMP19623 RNU4-10P-201ENST00000364383 140 ntBASIC-0.87□□□□□ -2.55
SRMP19623 SNORD115-20-201ENST00000365099 82 ntBASIC-0.87□□□□□ -2.55
SRMP19623 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.87□□□□□ -2.55
SRMP19623 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.87□□□□□ -2.55
SRMP19623 MIR635-201ENST00000384830 98 ntBASIC-0.87□□□□□ -2.55
SRMP19623 MIR599-201ENST00000385069 95 ntBASIC-0.87□□□□□ -2.55
SRMP19623 SNORD115-46-201ENST00000390982 71 ntBASIC-0.87□□□□□ -2.55
SRMP19623 RNY4P36-201ENST00000391116 96 ntBASIC-0.87□□□□□ -2.55
SRMP19623 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.87□□□□□ -2.55
SRMP19623 RNU7-137P-201ENST00000516788 62 ntBASIC-0.87□□□□□ -2.55
SRMP19623 AC040926.1-201ENST00000530195 238 ntBASIC-0.87□□□□□ -2.55
SRMP19623 MIR548AX-201ENST00000580117 73 ntBASIC-0.87□□□□□ -2.55
SRMP19623 MIR3920-201ENST00000581751 86 ntBASIC-0.87□□□□□ -2.55
SRMP19623 MIR376A1-201ENST00000616574 68 ntBASIC-0.87□□□□□ -2.55
SRMP19623 SNORD114-10-201ENST00000363409 72 ntBASIC-0.88□□□□□ -2.55
SRMP19623 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.88□□□□□ -2.55
SRMP19623 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.88□□□□□ -2.55
SRMP19623 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.88□□□□□ -2.55
SRMP19623 SNORD116-29-201ENST00000384516 83 ntBASIC-0.88□□□□□ -2.55
SRMP19623 AL603914.1-201ENST00000401964 204 ntBASIC-0.88□□□□□ -2.55
SRMP19623 MTATP6P23-201ENST00000440153 476 ntBASIC-0.88□□□□□ -2.55
SRMP19623 snoU18.1-201ENST00000629629 71 ntBASIC-0.88□□□□□ -2.55
SRMP19623 RNU1-141P-201ENST00000364623 158 ntBASIC-0.89□□□□□ -2.55
SRMP19623 RNU6-326P-201ENST00000365480 107 ntBASIC-0.89□□□□□ -2.55
SRMP19623 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.89□□□□□ -2.55
SRMP19623 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.89□□□□□ -2.55
SRMP19623 MIR181B2-201ENST00000385004 89 ntBASIC-0.89□□□□□ -2.55
SRMP19623 MIR519A1-201ENST00000385257 85 ntBASIC-0.89□□□□□ -2.55
SRMP19623 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.89□□□□□ -2.55
SRMP19623 SNORA53-201ENST00000391141 249 ntBASIC-0.89□□□□□ -2.55
SRMP19623 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.89□□□□□ -2.55
SRMP19623 RNU7-152P-201ENST00000458982 64 ntBASIC-0.89□□□□□ -2.55
SRMP19623 SNORA27.4-201ENST00000516650 95 ntBASIC-0.89□□□□□ -2.55
SRMP19623 RNU6-570P-201ENST00000517051 105 ntBASIC-0.89□□□□□ -2.55
SRMP19623 RNU7-188P-201ENST00000517063 64 ntBASIC-0.89□□□□□ -2.55
SRMP19623 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.89□□□□□ -2.55
SRMP19623 AC037487.3-201ENST00000606668 112 ntBASIC-0.89□□□□□ -2.55
SRMP19623 uc_338.10-201ENST00000621872 182 ntBASIC-0.89□□□□□ -2.55
SRMP19623 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.9□□□□□ -2.55
SRMP19623 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.9□□□□□ -2.55
SRMP19623 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.9□□□□□ -2.55
SRMP19623 RNU6-290P-201ENST00000365212 101 ntBASIC-0.9□□□□□ -2.55
SRMP19623 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.9□□□□□ -2.55
SRMP19623 TRAJ51-201ENST00000504127 63 ntBASIC-0.9□□□□□ -2.55
SRMP19623 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.9□□□□□ -2.55
SRMP19623 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.9□□□□□ -2.55
SRMP19623 AC084782.3-201ENST00000612282 578 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms