Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU6-195P-201ENST00000411352 109 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 RNU7-87P-201ENST00000459343 62 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 RNU6-470P-201ENST00000515954 104 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 RNU6-189P-201ENST00000516120 101 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 RNU1-54P-201ENST00000517181 120 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 MIR4490-201ENST00000582647 84 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 AC124303.1-201ENST00000605703 360 ntBASIC-2.94□□□□□ -2.88
HMGA1P17096 RNU6-924P-201ENST00000362926 108 ntBASIC-2.95□□□□□ -2.88
HMGA1P17096 RNU6-710P-201ENST00000410424 105 ntBASIC-2.95□□□□□ -2.88
HMGA1P17096 RNU2-66P-201ENST00000410650 161 ntBASIC-2.95□□□□□ -2.88
HMGA1P17096 RNU6-1038P-201ENST00000516516 104 ntBASIC-2.95□□□□□ -2.88
HMGA1P17096 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.95□□□□□ -2.88
HMGA1P17096 AL512427.1-201ENST00000618593 349 ntBASIC-2.95□□□□□ -2.88
HMGA1P17096 AC009878.1-201ENST00000621819 340 ntBASIC-2.95□□□□□ -2.88
HMGA1P17096 AC021613.1-201ENST00000623880 111 ntBASIC-2.95□□□□□ -2.88
HMGA1P17096 Y_RNA.171-201ENST00000363760 102 ntBASIC-2.96□□□□□ -2.88
HMGA1P17096 SNORD114-4-201ENST00000363962 75 ntBASIC-2.96□□□□□ -2.88
HMGA1P17096 Y_RNA.486-201ENST00000384398 107 ntBASIC-2.96□□□□□ -2.88
HMGA1P17096 SNORA36B-201ENST00000410438 131 ntBASIC-2.96□□□□□ -2.88
HMGA1P17096 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-2.96□□□□□ -2.88
HMGA1P17096 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.96□□□□□ -2.88
HMGA1P17096 MIR216B-201ENST00000390186 82 ntBASIC-2.97□□□□□ -2.88
HMGA1P17096 RNU6-101P-201ENST00000410323 104 ntBASIC-2.97□□□□□ -2.88
HMGA1P17096 PCMTD1P1-201ENST00000455560 355 ntBASIC-2.97□□□□□ -2.88
HMGA1P17096 FGF7P4-201ENST00000509595 295 ntBASIC-2.97□□□□□ -2.88
HMGA1P17096 AC092747.3-201ENST00000603769 301 ntBASIC-2.97□□□□□ -2.88
HMGA1P17096 AC011476.5-201ENST00000615594 130 ntBASIC-2.97□□□□□ -2.88
HMGA1P17096 AL121895.2-201ENST00000619558 447 ntBASIC-2.97□□□□□ -2.88
HMGA1P17096 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-2.98□□□□□ -2.89
HMGA1P17096 AL161932.1-201ENST00000437408 146 ntBASIC-2.98□□□□□ -2.89
HMGA1P17096 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.98□□□□□ -2.89
HMGA1P17096 RNU6-1170P-201ENST00000515974 106 ntBASIC-2.98□□□□□ -2.89
HMGA1P17096 MTND4P7-201ENST00000523876 130 ntBASIC-2.98□□□□□ -2.89
HMGA1P17096 MTATP6P24-201ENST00000576835 677 ntBASIC-2.98□□□□□ -2.89
HMGA1P17096 AC006504.6-201ENST00000590142 199 ntBASIC-2.98□□□□□ -2.89
HMGA1P17096 AC084781.2-201ENST00000615568 161 ntBASIC-2.98□□□□□ -2.89
HMGA1P17096 U6.100-201ENST00000636230 99 ntBASIC-2.98□□□□□ -2.89
HMGA1P17096 RNU6-961P-201ENST00000363893 105 ntBASIC-2.99□□□□□ -2.89
HMGA1P17096 RNU6-1163P-201ENST00000364516 107 ntBASIC-2.99□□□□□ -2.89
HMGA1P17096 RNU6-108P-201ENST00000365558 107 ntBASIC-2.99□□□□□ -2.89
HMGA1P17096 RNU6-258P-201ENST00000390884 101 ntBASIC-2.99□□□□□ -2.89
HMGA1P17096 RNU6-893P-201ENST00000458841 100 ntBASIC-2.99□□□□□ -2.89
HMGA1P17096 RNU7-180P-201ENST00000459240 63 ntBASIC-2.99□□□□□ -2.89
HMGA1P17096 SNORA19.2-201ENST00000516013 114 ntBASIC-2.99□□□□□ -2.89
HMGA1P17096 MIR5683-201ENST00000636514 76 ntBASIC-2.99□□□□□ -2.89
HMGA1P17096 RNY4P9-201ENST00000363194 97 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.207-201ENST00000364142 106 ntBASIC-3□□□□□ -2.89
HMGA1P17096 RNU4-24P-201ENST00000364565 139 ntBASIC-3□□□□□ -2.89
HMGA1P17096 RNY4P34-201ENST00000364779 95 ntBASIC-3□□□□□ -2.89
HMGA1P17096 RNU4-17P-201ENST00000365598 141 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.454-201ENST00000384224 113 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.470-201ENST00000384307 117 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.501-201ENST00000384467 103 ntBASIC-3□□□□□ -2.89
HMGA1P17096 AC113618.1-201ENST00000416747 285 ntBASIC-3□□□□□ -2.89
HMGA1P17096 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-3□□□□□ -2.89
HMGA1P17096 RNU7-80P-201ENST00000459562 61 ntBASIC-3□□□□□ -2.89
HMGA1P17096 ACA59.1-201ENST00000515966 143 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.698-201ENST00000516798 118 ntBASIC-3□□□□□ -2.89
HMGA1P17096 AL118558.2-201ENST00000556294 238 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.812-201ENST00000610788 101 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.784-201ENST00000613803 101 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.787-201ENST00000616522 101 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.780-201ENST00000617336 101 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.801-201ENST00000619005 101 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.778-201ENST00000620203 90 ntBASIC-3□□□□□ -2.89
HMGA1P17096 Y_RNA.76-201ENST00000362931 109 ntBASIC-3.01□□□□□ -2.89
HMGA1P17096 RNU6-1290P-201ENST00000362957 109 ntBASIC-3.01□□□□□ -2.89
HMGA1P17096 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.01□□□□□ -2.89
HMGA1P17096 UBE2V1P7-201ENST00000446395 340 ntBASIC-3.01□□□□□ -2.89
HMGA1P17096 AC098826.2-201ENST00000452011 651 ntBASIC-3.01□□□□□ -2.89
HMGA1P17096 AC005357.1-201ENST00000588399 301 ntBASIC-3.01□□□□□ -2.89
HMGA1P17096 MIR548O2-201ENST00000616090 70 ntBASIC-3.01□□□□□ -2.89
HMGA1P17096 FTX_4.1-201ENST00000616291 147 ntBASIC-3.01□□□□□ -2.89
HMGA1P17096 MIR181A1-201ENST00000385026 110 ntBASIC-3.02□□□□□ -2.89
HMGA1P17096 SNORD12B-201ENST00000410433 91 ntBASIC-3.02□□□□□ -2.89
HMGA1P17096 DLEU2_5.2-201ENST00000610606 84 ntBASIC-3.02□□□□□ -2.89
HMGA1P17096 SNORD114-10-201ENST00000363409 72 ntBASIC-3.03□□□□□ -2.89
HMGA1P17096 RNU6-1321P-201ENST00000390905 107 ntBASIC-3.03□□□□□ -2.89
HMGA1P17096 MTND3P16-201ENST00000452205 344 ntBASIC-3.03□□□□□ -2.89
HMGA1P17096 SNRPGP8-201ENST00000454064 226 ntBASIC-3.03□□□□□ -2.89
HMGA1P17096 MIR5696-201ENST00000578474 85 ntBASIC-3.03□□□□□ -2.89
HMGA1P17096 AC060780.3-201ENST00000589464 80 ntBASIC-3.03□□□□□ -2.89
HMGA1P17096 SNORA63.6-201ENST00000364921 119 ntBASIC-3.04□□□□□ -2.9
HMGA1P17096 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.04□□□□□ -2.9
HMGA1P17096 Y_RNA.557-201ENST00000384680 107 ntBASIC-3.04□□□□□ -2.9
HMGA1P17096 TRDV1-202ENST00000621643 102 ntBASIC-3.04□□□□□ -2.9
HMGA1P17096 RNU6-888P-201ENST00000363010 101 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 Y_RNA.222-201ENST00000364264 102 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 Y_RNA.358-201ENST00000365491 99 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 Y_RNA.528-201ENST00000384575 108 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 MIR516A2-201ENST00000384888 90 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 MIR517A-201ENST00000385001 87 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 MIR516A1-201ENST00000385033 90 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 Y_RNA.596-201ENST00000410462 109 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 Y_RNA.603-201ENST00000410571 108 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 Y_RNA.631-201ENST00000459607 101 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 MIR4662B-201ENST00000579498 81 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 AC103591.3-201ENST00000608684 209 ntBASIC-3.05□□□□□ -2.9
HMGA1P17096 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-3.05□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms