Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 Y_RNA.27-201ENST00000362540 103 ntBASIC-3.42□□□□□ -2.96
VCANP13611 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.42□□□□□ -2.96
VCANP13611 SNORA26.6-201ENST00000391256 115 ntBASIC-3.42□□□□□ -2.96
VCANP13611 RNU6-422P-201ENST00000384632 107 ntBASIC-3.42□□□□□ -2.96
VCANP13611 U6.101-201ENST00000637707 76 ntBASIC-3.42□□□□□ -2.96
VCANP13611 RNU6-990P-201ENST00000364385 104 ntBASIC-3.43□□□□□ -2.96
VCANP13611 Y_RNA.415-201ENST00000384012 112 ntBASIC-3.43□□□□□ -2.96
VCANP13611 RNU2-28P-201ENST00000410457 189 ntBASIC-3.43□□□□□ -2.96
VCANP13611 Y_RNA.596-201ENST00000410462 109 ntBASIC-3.43□□□□□ -2.96
VCANP13611 RNY3P8-201ENST00000411366 126 ntBASIC-3.43□□□□□ -2.96
VCANP13611 AL021707.8-201ENST00000609428 183 ntBASIC-3.43□□□□□ -2.96
VCANP13611 RNU6-801P-201ENST00000364087 105 ntBASIC-3.43□□□□□ -2.96
VCANP13611 RNY1P12-201ENST00000364251 105 ntBASIC-3.43□□□□□ -2.96
VCANP13611 SNORA20B-201ENST00000384220 132 ntBASIC-3.43□□□□□ -2.96
VCANP13611 MTCYBP4-201ENST00000401524 249 ntBASIC-3.43□□□□□ -2.96
VCANP13611 Y_RNA.793-201ENST00000411222 111 ntBASIC-3.43□□□□□ -2.96
VCANP13611 SNORA27.1-201ENST00000362604 124 ntBASIC-3.43□□□□□ -2.96
VCANP13611 AL353193.1-201ENST00000421444 268 ntBASIC-3.43□□□□□ -2.96
VCANP13611 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-3.43□□□□□ -2.96
VCANP13611 RNU6-268P-201ENST00000364174 107 ntBASIC-3.44□□□□□ -2.96
VCANP13611 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.44□□□□□ -2.96
VCANP13611 AL161932.1-201ENST00000437408 146 ntBASIC-3.44□□□□□ -2.96
VCANP13611 AL137792.2-201ENST00000443484 235 ntBASIC-3.44□□□□□ -2.96
VCANP13611 RNU7-79P-201ENST00000516082 62 ntBASIC-3.44□□□□□ -2.96
VCANP13611 MIR4500-201ENST00000579472 76 ntBASIC-3.44□□□□□ -2.96
VCANP13611 SNORD11B-201ENST00000607707 90 ntBASIC-3.44□□□□□ -2.96
VCANP13611 RNU6-407P-201ENST00000365280 104 ntBASIC-3.44□□□□□ -2.96
VCANP13611 AL021921.1-201ENST00000442774 93 ntBASIC-3.44□□□□□ -2.96
VCANP13611 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-3.44□□□□□ -2.96
VCANP13611 AC108729.2-201ENST00000476543 840 ntBASIC-3.44□□□□□ -2.96
VCANP13611 AC018710.1-201ENST00000506509 158 ntBASIC-3.44□□□□□ -2.96
VCANP13611 MTND1P36-201ENST00000522384 936 ntBASIC-3.44□□□□□ -2.96
VCANP13611 RNU6-822P-201ENST00000362707 106 ntBASIC-3.45□□□□□ -2.96
VCANP13611 RNU6-377P-201ENST00000515965 102 ntBASIC-3.45□□□□□ -2.96
VCANP13611 RNU6-117P-201ENST00000365415 107 ntBASIC-3.45□□□□□ -2.96
VCANP13611 SNORA27-201ENST00000384323 126 ntBASIC-3.45□□□□□ -2.96
VCANP13611 SNORA20-201ENST00000384662 132 ntBASIC-3.45□□□□□ -2.96
VCANP13611 RNU6-114P-201ENST00000384704 105 ntBASIC-3.45□□□□□ -2.96
VCANP13611 AC007494.3-201ENST00000624660 743 ntBASIC-3.46□□□□□ -2.96
VCANP13611 MTND3P16-201ENST00000452205 344 ntBASIC-3.47□□□□□ -2.96
VCANP13611 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.47□□□□□ -2.97
VCANP13611 RNU6-495P-201ENST00000362995 107 ntBASIC-3.47□□□□□ -2.97
VCANP13611 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-3.48□□□□□ -2.97
VCANP13611 MIR15A-201ENST00000607334 83 ntBASIC-3.48□□□□□ -2.97
VCANP13611 AC099654.12-201ENST00000639868 649 ntBASIC-3.48□□□□□ -2.97
VCANP13611 RNU6-874P-201ENST00000362390 105 ntBASIC-3.48□□□□□ -2.97
VCANP13611 SNORA40.5-201ENST00000391061 128 ntBASIC-3.48□□□□□ -2.97
VCANP13611 MIR1270-201ENST00000459320 83 ntBASIC-3.48□□□□□ -2.97
VCANP13611 Y_RNA.677-201ENST00000516401 85 ntBASIC-3.48□□□□□ -2.97
VCANP13611 RNU6-361P-201ENST00000364454 107 ntBASIC-3.48□□□□□ -2.97
VCANP13611 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.48□□□□□ -2.97
VCANP13611 MIR217-201ENST00000384817 110 ntBASIC-3.49□□□□□ -2.97
VCANP13611 MIR320B2-201ENST00000408479 138 ntBASIC-3.49□□□□□ -2.97
VCANP13611 RNU7-24P-201ENST00000458867 62 ntBASIC-3.49□□□□□ -2.97
VCANP13611 AL606534.2-204ENST00000635008 178 ntBASIC-3.49□□□□□ -2.97
VCANP13611 RNU6-260P-201ENST00000384092 107 ntBASIC-3.49□□□□□ -2.97
VCANP13611 RNU6-523P-201ENST00000516304 54 ntBASIC-3.49□□□□□ -2.97
VCANP13611 AL022161.1-201ENST00000604390 213 ntBASIC-3.49□□□□□ -2.97
VCANP13611 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.49□□□□□ -2.97
VCANP13611 MIR656-201ENST00000385224 78 ntBASIC-3.49□□□□□ -2.97
VCANP13611 SNORA17.4-201ENST00000391287 132 ntBASIC-3.49□□□□□ -2.97
VCANP13611 U6atac.1-201ENST00000616025 117 ntBASIC-3.49□□□□□ -2.97
VCANP13611 U2.18-201ENST00000622185 84 ntBASIC-3.49□□□□□ -2.97
VCANP13611 AC048344.4-201ENST00000619744 527 ntBASIC-3.5□□□□□ -2.97
VCANP13611 RNU6-664P-201ENST00000362381 107 ntBASIC-3.5□□□□□ -2.97
VCANP13611 SNORA33.1-201ENST00000364957 130 ntBASIC-3.5□□□□□ -2.97
VCANP13611 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.51□□□□□ -2.97
VCANP13611 MTND2P31-201ENST00000512602 616 ntBASIC-3.51□□□□□ -2.97
VCANP13611 RNU6-62P-201ENST00000516526 102 ntBASIC-3.51□□□□□ -2.97
VCANP13611 RNU6-68P-201ENST00000516576 104 ntBASIC-3.51□□□□□ -2.97
VCANP13611 Y_RNA.62-201ENST00000362840 99 ntBASIC-3.52□□□□□ -2.97
VCANP13611 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.52□□□□□ -2.97
VCANP13611 RNU6-669P-201ENST00000365575 107 ntBASIC-3.52□□□□□ -2.97
VCANP13611 MTND2P18-201ENST00000419962 1030 ntBASIC-3.52□□□□□ -2.97
VCANP13611 MIR3684-201ENST00000579779 74 ntBASIC-3.52□□□□□ -2.97
VCANP13611 Y_RNA.241-201ENST00000364470 117 ntBASIC-3.52□□□□□ -2.97
VCANP13611 SNORA20.2-201ENST00000383922 131 ntBASIC-3.52□□□□□ -2.97
VCANP13611 RNU6-692P-201ENST00000384496 107 ntBASIC-3.52□□□□□ -2.97
VCANP13611 AC022616.4-201ENST00000522985 181 ntBASIC-3.52□□□□□ -2.97
VCANP13611 MIR3146-201ENST00000580367 79 ntBASIC-3.52□□□□□ -2.97
VCANP13611 SNORD87-201ENST00000364849 89 ntBASIC-3.53□□□□□ -2.97
VCANP13611 EEF1A1P40-201ENST00000412883 573 ntBASIC-3.53□□□□□ -2.97
VCANP13611 SNORD101-201ENST00000384027 73 ntBASIC-3.53□□□□□ -2.97
VCANP13611 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.53□□□□□ -2.97
VCANP13611 RNU7-96P-201ENST00000459535 64 ntBASIC-3.54□□□□□ -2.98
VCANP13611 AC107905.1-201ENST00000616204 426 ntBASIC-3.54□□□□□ -2.98
VCANP13611 RNU6-159P-201ENST00000391080 106 ntBASIC-3.54□□□□□ -2.98
VCANP13611 RNU6-1228P-201ENST00000391014 107 ntBASIC-3.54□□□□□ -2.98
VCANP13611 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-3.54□□□□□ -2.98
VCANP13611 AC093899.1-201ENST00000457984 376 ntBASIC-3.54□□□□□ -2.98
VCANP13611 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.54□□□□□ -2.98
VCANP13611 RNU7-25P-201ENST00000516544 62 ntBASIC-3.54□□□□□ -2.98
VCANP13611 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.55□□□□□ -2.98
VCANP13611 MIR548AA1-201ENST00000384971 97 ntBASIC-3.55□□□□□ -2.98
VCANP13611 MTCO2P5-201ENST00000422621 426 ntBASIC-3.55□□□□□ -2.98
VCANP13611 U6.81-201ENST00000612550 106 ntBASIC-3.55□□□□□ -2.98
VCANP13611 U6.100-201ENST00000636230 99 ntBASIC-3.55□□□□□ -2.98
VCANP13611 RNU7-151P-201ENST00000516930 53 ntBASIC-3.55□□□□□ -2.98
VCANP13611 RNU6-170P-201ENST00000362832 104 ntBASIC-3.55□□□□□ -2.98
VCANP13611 SUMO1P1-201ENST00000497904 306 ntBASIC-3.55□□□□□ -2.98
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms