Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MIR520F-201ENST00000384824 87 ntBASIC0.88□□□□□ -2.27
PCNAP12004 RNU6-321P-201ENST00000410912 106 ntBASIC0.88□□□□□ -2.27
PCNAP12004 AC004812.1-201ENST00000540773 146 ntBASIC0.88□□□□□ -2.27
PCNAP12004 MIR3121-201ENST00000579680 77 ntBASIC0.88□□□□□ -2.27
PCNAP12004 RNU6-774P-201ENST00000363238 107 ntBASIC0.87□□□□□ -2.27
PCNAP12004 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
PCNAP12004 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
PCNAP12004 MT-TF-201ENST00000387314 71 ntBASIC0.87□□□□□ -2.27
PCNAP12004 SNORD99-201ENST00000408612 74 ntBASIC0.87□□□□□ -2.27
PCNAP12004 RNU6-893P-201ENST00000458841 100 ntBASIC0.87□□□□□ -2.27
PCNAP12004 RNU6-1053P-201ENST00000515930 101 ntBASIC0.87□□□□□ -2.27
PCNAP12004 Y_RNA.692-201ENST00000516627 105 ntBASIC0.87□□□□□ -2.27
PCNAP12004 IGKV1-22-201ENST00000524313 326 ntBASIC0.87□□□□□ -2.27
PCNAP12004 AC022523.2-201ENST00000561045 150 ntBASIC0.87□□□□□ -2.27
PCNAP12004 MIR4804-201ENST00000581683 73 ntBASIC0.87□□□□□ -2.27
PCNAP12004 MIR548AE2-201ENST00000583456 67 ntBASIC0.87□□□□□ -2.27
PCNAP12004 RMST_2.1-201ENST00000617263 136 ntBASIC0.87□□□□□ -2.27
PCNAP12004 AL589743.1-201ENST00000551932 2712 ntBASIC0.87□□□□□ -2.27
PCNAP12004 Y_RNA.298-201ENST00000364960 107 ntBASIC0.86□□□□□ -2.27
PCNAP12004 Y_RNA.531-201ENST00000384589 121 ntBASIC0.86□□□□□ -2.27
PCNAP12004 SNORD105-201ENST00000386910 85 ntBASIC0.86□□□□□ -2.27
PCNAP12004 U8.15-201ENST00000390947 134 ntBASIC0.86□□□□□ -2.27
PCNAP12004 MIR1257-201ENST00000408490 117 ntBASIC0.86□□□□□ -2.27
PCNAP12004 RNU6-113P-201ENST00000516653 101 ntBASIC0.86□□□□□ -2.27
PCNAP12004 RNY4P20-201ENST00000516678 93 ntBASIC0.86□□□□□ -2.27
PCNAP12004 SNORA4-201ENST00000584302 138 ntBASIC0.86□□□□□ -2.27
PCNAP12004 AL137067.1-201ENST00000615933 120 ntBASIC0.86□□□□□ -2.27
PCNAP12004 AP001340.1-201ENST00000624405 217 ntBASIC0.86□□□□□ -2.27
PCNAP12004 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
PCNAP12004 RNA5SP432-201ENST00000362480 116 ntBASIC0.85□□□□□ -2.27
PCNAP12004 Y_RNA.114-201ENST00000363265 113 ntBASIC0.85□□□□□ -2.27
PCNAP12004 RNY1P13-201ENST00000365030 105 ntBASIC0.85□□□□□ -2.27
PCNAP12004 MIR520H-201ENST00000385126 88 ntBASIC0.85□□□□□ -2.27
PCNAP12004 RNU6-1086P-201ENST00000410930 100 ntBASIC0.85□□□□□ -2.27
PCNAP12004 RPL39P25-201ENST00000449384 154 ntBASIC0.85□□□□□ -2.27
PCNAP12004 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.85□□□□□ -2.27
PCNAP12004 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.85□□□□□ -2.27
PCNAP12004 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
PCNAP12004 AL136317.1-201ENST00000612653 226 ntBASIC0.85□□□□□ -2.27
PCNAP12004 SNORD115-2-201ENST00000362842 82 ntBASIC0.84□□□□□ -2.27
PCNAP12004 SNORD115-20-201ENST00000365099 82 ntBASIC0.84□□□□□ -2.27
PCNAP12004 RNU6-1104P-201ENST00000384723 104 ntBASIC0.84□□□□□ -2.27
PCNAP12004 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
PCNAP12004 MIR125B2-201ENST00000385128 89 ntBASIC0.84□□□□□ -2.27
PCNAP12004 SNORD93-201ENST00000408813 74 ntBASIC0.84□□□□□ -2.27
PCNAP12004 MIR1270-201ENST00000459320 83 ntBASIC0.84□□□□□ -2.27
PCNAP12004 RNU7-79P-201ENST00000516082 62 ntBASIC0.84□□□□□ -2.27
PCNAP12004 AC008608.1-201ENST00000603910 127 ntBASIC0.84□□□□□ -2.27
PCNAP12004 AL353765.1-201ENST00000605514 183 ntBASIC0.84□□□□□ -2.27
PCNAP12004 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
PCNAP12004 RNY1P5-201ENST00000383890 115 ntBASIC0.83□□□□□ -2.28
PCNAP12004 Y_RNA.568-201ENST00000384742 113 ntBASIC0.83□□□□□ -2.28
PCNAP12004 MIR938-201ENST00000401216 83 ntBASIC0.83□□□□□ -2.28
PCNAP12004 AC096949.1-201ENST00000412047 152 ntBASIC0.83□□□□□ -2.28
PCNAP12004 MTND4LP9-201ENST00000427694 174 ntBASIC0.83□□□□□ -2.28
PCNAP12004 RNU7-56P-201ENST00000458744 62 ntBASIC0.83□□□□□ -2.28
PCNAP12004 RNU7-35P-201ENST00000517174 62 ntBASIC0.83□□□□□ -2.28
PCNAP12004 AC011195.1-201ENST00000578177 177 ntBASIC0.83□□□□□ -2.28
PCNAP12004 MIR3133-201ENST00000583157 78 ntBASIC0.83□□□□□ -2.28
PCNAP12004 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
PCNAP12004 Y_RNA.343-201ENST00000365354 112 ntBASIC0.82□□□□□ -2.28
PCNAP12004 RNU6-949P-201ENST00000384040 107 ntBASIC0.82□□□□□ -2.28
PCNAP12004 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
PCNAP12004 RNU6-257P-201ENST00000410238 98 ntBASIC0.82□□□□□ -2.28
PCNAP12004 RNU7-156P-201ENST00000517214 74 ntBASIC0.82□□□□□ -2.28
PCNAP12004 AC025627.3-201ENST00000582078 182 ntBASIC0.82□□□□□ -2.28
PCNAP12004 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
PCNAP12004 U7.2-201ENST00000607576 63 ntBASIC0.82□□□□□ -2.28
PCNAP12004 RNU6-235P-201ENST00000362644 107 ntBASIC0.81□□□□□ -2.28
PCNAP12004 RNY1P10-201ENST00000363268 113 ntBASIC0.81□□□□□ -2.28
PCNAP12004 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
PCNAP12004 RNU6-1062P-201ENST00000383908 107 ntBASIC0.81□□□□□ -2.28
PCNAP12004 RNU6-364P-201ENST00000384387 107 ntBASIC0.81□□□□□ -2.28
PCNAP12004 AC244098.3-201ENST00000424803 96 ntBASIC0.81□□□□□ -2.28
PCNAP12004 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.81□□□□□ -2.28
PCNAP12004 RNU7-102P-201ENST00000458948 62 ntBASIC0.81□□□□□ -2.28
PCNAP12004 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
PCNAP12004 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
PCNAP12004 MIR337-201ENST00000362281 93 ntBASIC0.8□□□□□ -2.28
PCNAP12004 RNU6-403P-201ENST00000363163 104 ntBASIC0.8□□□□□ -2.28
PCNAP12004 Y_RNA.280-201ENST00000364765 112 ntBASIC0.8□□□□□ -2.28
PCNAP12004 RNU4-83P-201ENST00000410863 133 ntBASIC0.8□□□□□ -2.28
PCNAP12004 RN7SKP19-201ENST00000516016 252 ntBASIC0.8□□□□□ -2.28
PCNAP12004 RNU6-781P-201ENST00000516377 101 ntBASIC0.8□□□□□ -2.28
PCNAP12004 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
PCNAP12004 AL359881.1-201ENST00000602916 267 ntBASIC0.8□□□□□ -2.28
PCNAP12004 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PCNAP12004 RNU6-187P-201ENST00000384139 106 ntBASIC0.79□□□□□ -2.28
PCNAP12004 MT-TI-201ENST00000387365 69 ntBASIC0.79□□□□□ -2.28
PCNAP12004 RNU1-119P-201ENST00000391122 165 ntBASIC0.79□□□□□ -2.28
PCNAP12004 Y_RNA.588-201ENST00000391254 102 ntBASIC0.79□□□□□ -2.28
PCNAP12004 MIR1263-201ENST00000408324 86 ntBASIC0.79□□□□□ -2.28
PCNAP12004 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
PCNAP12004 SNORD67.1-201ENST00000516618 108 ntBASIC0.79□□□□□ -2.28
PCNAP12004 MIR4491-201ENST00000581087 68 ntBASIC0.79□□□□□ -2.28
PCNAP12004 MIR8066-201ENST00000617280 78 ntBASIC0.79□□□□□ -2.28
PCNAP12004 AC105081.1-201ENST00000617727 106 ntBASIC0.79□□□□□ -2.28
PCNAP12004 Y_RNA.13-201ENST00000362403 112 ntBASIC0.78□□□□□ -2.28
PCNAP12004 SNORA72.6-201ENST00000384520 129 ntBASIC0.78□□□□□ -2.28
PCNAP12004 MIR573-201ENST00000384964 99 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms