Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU6-801P-201ENST00000364087 105 ntBASIC-4.38□□□□□ -3.11
TOP2AP11388 SNORA15B-2-201ENST00000384058 135 ntBASIC-4.38□□□□□ -3.11
TOP2AP11388 SNORA15B-1-201ENST00000384334 135 ntBASIC-4.38□□□□□ -3.11
TOP2AP11388 Z82188.1-201ENST00000436709 154 ntBASIC-4.38□□□□□ -3.11
TOP2AP11388 SNORD11-201ENST00000459124 84 ntBASIC-4.38□□□□□ -3.11
TOP2AP11388 RNA5SP106-201ENST00000517274 100 ntBASIC-4.38□□□□□ -3.11
TOP2AP11388 AC107934.1-201ENST00000522215 217 ntBASIC-4.38□□□□□ -3.11
TOP2AP11388 MIR3674-201ENST00000636576 68 ntBASIC-4.38□□□□□ -3.11
TOP2AP11388 RNU6-281P-201ENST00000384212 103 ntBASIC-4.39□□□□□ -3.11
TOP2AP11388 AL033528.1-201ENST00000453780 140 ntBASIC-4.39□□□□□ -3.11
TOP2AP11388 RNY4P25-201ENST00000459254 96 ntBASIC-4.39□□□□□ -3.11
TOP2AP11388 AC005014.3-201ENST00000605985 190 ntBASIC-4.39□□□□□ -3.11
TOP2AP11388 SNORD115-30-201ENST00000364117 82 ntBASIC-4.4□□□□□ -3.11
TOP2AP11388 RNU6-1321P-201ENST00000390905 107 ntBASIC-4.4□□□□□ -3.11
TOP2AP11388 U3.27-201ENST00000391237 200 ntBASIC-4.4□□□□□ -3.11
TOP2AP11388 MIR1264-201ENST00000616374 69 ntBASIC-4.4□□□□□ -3.11
TOP2AP11388 RNU4-50P-201ENST00000364361 141 ntBASIC-4.41□□□□□ -3.11
TOP2AP11388 RNY4P10-201ENST00000365571 96 ntBASIC-4.41□□□□□ -3.11
TOP2AP11388 Y_RNA.408-201ENST00000383987 102 ntBASIC-4.41□□□□□ -3.11
TOP2AP11388 MTND3P7-201ENST00000474435 343 ntBASIC-4.41□□□□□ -3.11
TOP2AP11388 SEPT14P8-201ENST00000508026 178 ntBASIC-4.41□□□□□ -3.11
TOP2AP11388 RNU7-115P-201ENST00000516433 55 ntBASIC-4.41□□□□□ -3.11
TOP2AP11388 AC021613.1-201ENST00000623880 111 ntBASIC-4.41□□□□□ -3.11
TOP2AP11388 RNU6-664P-201ENST00000362381 107 ntBASIC-4.41□□□□□ -3.12
TOP2AP11388 Y_RNA.192-201ENST00000363977 102 ntBASIC-4.41□□□□□ -3.12
TOP2AP11388 RNU6-990P-201ENST00000364385 104 ntBASIC-4.41□□□□□ -3.12
TOP2AP11388 Y_RNA.291-201ENST00000364886 113 ntBASIC-4.41□□□□□ -3.12
TOP2AP11388 MTND2P3-201ENST00000452458 470 ntBASIC-4.41□□□□□ -3.12
TOP2AP11388 AC100814.1-201ENST00000606963 623 ntBASIC-4.41□□□□□ -3.12
TOP2AP11388 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-4.42□□□□□ -3.12
TOP2AP11388 RNU7-80P-201ENST00000459562 61 ntBASIC-4.42□□□□□ -3.12
TOP2AP11388 CPDP1-201ENST00000579660 283 ntBASIC-4.42□□□□□ -3.12
TOP2AP11388 MIR4696-201ENST00000581431 70 ntBASIC-4.42□□□□□ -3.12
TOP2AP11388 DLEU2_5.2-201ENST00000610606 84 ntBASIC-4.42□□□□□ -3.12
TOP2AP11388 Y_RNA.3-201ENST00000362331 103 ntBASIC-4.43□□□□□ -3.12
TOP2AP11388 RNU2-61P-201ENST00000411069 191 ntBASIC-4.43□□□□□ -3.12
TOP2AP11388 MTATP6P24-201ENST00000576835 677 ntBASIC-4.43□□□□□ -3.12
TOP2AP11388 AL021707.8-201ENST00000609428 183 ntBASIC-4.43□□□□□ -3.12
TOP2AP11388 AL158063.1-201ENST00000615349 536 ntBASIC-4.43□□□□□ -3.12
TOP2AP11388 AC022140.2-201ENST00000623500 188 ntBASIC-4.43□□□□□ -3.12
TOP2AP11388 Y_RNA.360-201ENST00000365512 102 ntBASIC-4.44□□□□□ -3.12
TOP2AP11388 RNU6-246P-201ENST00000384702 107 ntBASIC-4.44□□□□□ -3.12
TOP2AP11388 RNU7-48P-201ENST00000458875 63 ntBASIC-4.44□□□□□ -3.12
TOP2AP11388 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-4.44□□□□□ -3.12
TOP2AP11388 AP003357.1-201ENST00000604497 148 ntBASIC-4.44□□□□□ -3.12
TOP2AP11388 AC011476.5-201ENST00000615594 130 ntBASIC-4.44□□□□□ -3.12
TOP2AP11388 AL138825.1-201ENST00000618587 192 ntBASIC-4.44□□□□□ -3.12
TOP2AP11388 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-4.44□□□□□ -3.12
TOP2AP11388 Y_RNA.98-201ENST00000363109 102 ntBASIC-4.45□□□□□ -3.12
TOP2AP11388 RNU1-115P-201ENST00000365329 160 ntBASIC-4.45□□□□□ -3.12
TOP2AP11388 SNORD101-201ENST00000384027 73 ntBASIC-4.45□□□□□ -3.12
TOP2AP11388 RNU6-434P-201ENST00000384376 107 ntBASIC-4.45□□□□□ -3.12
TOP2AP11388 RNU6-1242P-201ENST00000391052 103 ntBASIC-4.45□□□□□ -3.12
TOP2AP11388 AL606923.1-201ENST00000406616 190 ntBASIC-4.45□□□□□ -3.12
TOP2AP11388 Y_RNA.695-201ENST00000516715 107 ntBASIC-4.45□□□□□ -3.12
TOP2AP11388 SNORA33.1-201ENST00000364957 130 ntBASIC-4.46□□□□□ -3.12
TOP2AP11388 Y_RNA.509-201ENST00000384506 99 ntBASIC-4.46□□□□□ -3.12
TOP2AP11388 AF228730.3-201ENST00000436691 102 ntBASIC-4.46□□□□□ -3.12
TOP2AP11388 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-4.46□□□□□ -3.12
TOP2AP11388 RNU7-149P-201ENST00000516739 59 ntBASIC-4.46□□□□□ -3.12
TOP2AP11388 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-4.46□□□□□ -3.12
TOP2AP11388 AC091932.4-201ENST00000623386 200 ntBASIC-4.46□□□□□ -3.12
TOP2AP11388 Y_RNA.134-201ENST00000363435 105 ntBASIC-4.47□□□□□ -3.13
TOP2AP11388 RNU6-207P-201ENST00000384137 107 ntBASIC-4.47□□□□□ -3.13
TOP2AP11388 MIR558-201ENST00000384920 94 ntBASIC-4.47□□□□□ -3.13
TOP2AP11388 AL031003.1-201ENST00000404229 172 ntBASIC-4.47□□□□□ -3.13
TOP2AP11388 AC006504.6-201ENST00000590142 199 ntBASIC-4.47□□□□□ -3.13
TOP2AP11388 RNU5F-6P-201ENST00000362979 116 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 SNORD115-48-201ENST00000364764 76 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 SNORD116-9-201ENST00000384000 95 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 Y_RNA.454-201ENST00000384224 113 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 SNORD116-3-201ENST00000384287 95 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 SNORD116-8-201ENST00000384365 95 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 SNORD116-7-201ENST00000384404 95 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 SNORD116-5-201ENST00000384462 95 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 RNU6-1177P-201ENST00000391058 104 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 RNU6-1254P-201ENST00000391266 104 ntBASIC-4.48□□□□□ -3.13
TOP2AP11388 SNORA32-201ENST00000384072 121 ntBASIC-4.49□□□□□ -3.13
TOP2AP11388 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.49□□□□□ -3.13
TOP2AP11388 RNU2-69P-201ENST00000516061 100 ntBASIC-4.49□□□□□ -3.13
TOP2AP11388 MIR3118-1-201ENST00000581787 76 ntBASIC-4.49□□□□□ -3.13
TOP2AP11388 AC018638.8-201ENST00000588755 281 ntBASIC-4.49□□□□□ -3.13
TOP2AP11388 RNU6-560P-201ENST00000364007 108 ntBASIC-4.5□□□□□ -3.13
TOP2AP11388 MIR520D-201ENST00000385002 87 ntBASIC-4.5□□□□□ -3.13
TOP2AP11388 RNU6-243P-201ENST00000391140 107 ntBASIC-4.5□□□□□ -3.13
TOP2AP11388 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-4.5□□□□□ -3.13
TOP2AP11388 MIRLET7A2-201ENST00000362105 72 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 Y_RNA.46-201ENST00000362695 102 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 Y_RNA.143-201ENST00000363520 106 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 SNORD61-201ENST00000384252 73 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 MTND1P12-201ENST00000455231 147 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 RNU6-1281P-201ENST00000516223 105 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 AC115989.2-201ENST00000578640 563 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 CLPTM1LP1-201ENST00000604519 484 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 AC013734.1-201ENST00000619329 111 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 U6.97-201ENST00000636904 101 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 RNU6-495P-201ENST00000362995 107 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 RNU6-1060P-201ENST00000384664 107 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 AC137499.1-201ENST00000427602 88 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 SCARNA24.2-201ENST00000516968 130 ntBASIC-4.51□□□□□ -3.13
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms