Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MIR377-201ENST00000362145 69 ntBASIC1□□□□□ -2.25
CD48P09326 SNORD115-2-201ENST00000362842 82 ntBASIC1□□□□□ -2.25
CD48P09326 Y_RNA.127-201ENST00000363386 109 ntBASIC1□□□□□ -2.25
CD48P09326 SNORD115-20-201ENST00000365099 82 ntBASIC1□□□□□ -2.25
CD48P09326 RNU6-690P-201ENST00000365242 106 ntBASIC1□□□□□ -2.25
CD48P09326 RNU6-910P-201ENST00000390844 107 ntBASIC1□□□□□ -2.25
CD48P09326 MIR548I2-201ENST00000408348 149 ntBASIC1□□□□□ -2.25
CD48P09326 RNA5SP144-201ENST00000410846 116 ntBASIC1□□□□□ -2.25
CD48P09326 RNU7-21P-201ENST00000459430 62 ntBASIC1□□□□□ -2.25
CD48P09326 RPS29P1-201ENST00000465274 159 ntBASIC1□□□□□ -2.25
CD48P09326 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1□□□□□ -2.25
CD48P09326 RNU5E-3P-201ENST00000515913 68 ntBASIC1□□□□□ -2.25
CD48P09326 RNU2-35P-201ENST00000516446 142 ntBASIC1□□□□□ -2.25
CD48P09326 RNU6-1258P-201ENST00000516911 111 ntBASIC1□□□□□ -2.25
CD48P09326 SNORA70.22-201ENST00000517160 124 ntBASIC1□□□□□ -2.25
CD48P09326 AC022523.2-201ENST00000561045 150 ntBASIC1□□□□□ -2.25
CD48P09326 AC133485.4-201ENST00000561835 220 ntBASIC1□□□□□ -2.25
CD48P09326 AC138907.4-201ENST00000570107 226 ntBASIC1□□□□□ -2.25
CD48P09326 MIR4305-201ENST00000583252 102 ntBASIC1□□□□□ -2.25
CD48P09326 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1□□□□□ -2.25
CD48P09326 RNA5SP327-201ENST00000362494 101 ntBASIC0.99□□□□□ -2.25
CD48P09326 SNORA22.1-201ENST00000362701 134 ntBASIC0.99□□□□□ -2.25
CD48P09326 SNORD58C-201ENST00000365223 64 ntBASIC0.99□□□□□ -2.25
CD48P09326 RNU6-80P-201ENST00000384195 107 ntBASIC0.99□□□□□ -2.25
CD48P09326 MIR520E-201ENST00000384867 87 ntBASIC0.99□□□□□ -2.25
CD48P09326 SNORA75.2-201ENST00000391138 150 ntBASIC0.99□□□□□ -2.25
CD48P09326 SNORA75.3-201ENST00000391231 150 ntBASIC0.99□□□□□ -2.25
CD48P09326 RNU6-735P-201ENST00000410612 107 ntBASIC0.99□□□□□ -2.25
CD48P09326 MIR1270-201ENST00000459320 83 ntBASIC0.99□□□□□ -2.25
CD48P09326 SNORD33.1-201ENST00000516213 88 ntBASIC0.99□□□□□ -2.25
CD48P09326 Y_RNA.712-201ENST00000517011 92 ntBASIC0.99□□□□□ -2.25
CD48P09326 MIR4264-201ENST00000583520 66 ntBASIC0.99□□□□□ -2.25
CD48P09326 AL137067.1-201ENST00000615933 120 ntBASIC0.99□□□□□ -2.25
CD48P09326 RNA5SP205-201ENST00000364653 136 ntBASIC0.98□□□□□ -2.25
CD48P09326 Y_RNA.291-201ENST00000364886 113 ntBASIC0.98□□□□□ -2.25
CD48P09326 Y_RNA.353-201ENST00000365440 108 ntBASIC0.98□□□□□ -2.25
CD48P09326 SNORA25-201ENST00000384384 134 ntBASIC0.98□□□□□ -2.25
CD48P09326 RNU6-1104P-201ENST00000384723 104 ntBASIC0.98□□□□□ -2.25
CD48P09326 RNU2-51P-201ENST00000410708 197 ntBASIC0.98□□□□□ -2.25
CD48P09326 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
CD48P09326 RNU7-123P-201ENST00000515911 60 ntBASIC0.98□□□□□ -2.25
CD48P09326 RN7SKP19-201ENST00000516016 252 ntBASIC0.98□□□□□ -2.25
CD48P09326 RNU6-479P-201ENST00000516348 105 ntBASIC0.98□□□□□ -2.25
CD48P09326 AC021443.1-201ENST00000604478 211 ntBASIC0.98□□□□□ -2.25
CD48P09326 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.98□□□□□ -2.25
CD48P09326 MIR3914-2-201ENST00000637339 95 ntBASIC0.98□□□□□ -2.25
CD48P09326 Y_RNA.168-201ENST00000363740 102 ntBASIC0.97□□□□□ -2.25
CD48P09326 RNU6-1117P-201ENST00000384525 104 ntBASIC0.97□□□□□ -2.25
CD48P09326 AL022718.1-201ENST00000412004 84 ntBASIC0.97□□□□□ -2.25
CD48P09326 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.97□□□□□ -2.25
CD48P09326 snoU13.2-201ENST00000459201 104 ntBASIC0.97□□□□□ -2.25
CD48P09326 AP000753.3-201ENST00000604083 169 ntBASIC0.97□□□□□ -2.25
CD48P09326 AC027335.2-201ENST00000624030 375 ntBASIC0.97□□□□□ -2.25
CD48P09326 Y_RNA.171-201ENST00000363760 102 ntBASIC0.96□□□□□ -2.26
CD48P09326 Y_RNA.205-201ENST00000364128 113 ntBASIC0.96□□□□□ -2.26
CD48P09326 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
CD48P09326 Y_RNA.298-201ENST00000364960 107 ntBASIC0.96□□□□□ -2.26
CD48P09326 RNU6-429P-201ENST00000384582 108 ntBASIC0.96□□□□□ -2.26
CD48P09326 Y_RNA.531-201ENST00000384589 121 ntBASIC0.96□□□□□ -2.26
CD48P09326 MIR19B1-201ENST00000384829 87 ntBASIC0.96□□□□□ -2.26
CD48P09326 MIR563-201ENST00000385080 79 ntBASIC0.96□□□□□ -2.26
CD48P09326 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CD48P09326 RNU6-1154P-201ENST00000391001 104 ntBASIC0.96□□□□□ -2.26
CD48P09326 RNA5SP136-201ENST00000410906 107 ntBASIC0.96□□□□□ -2.26
CD48P09326 RNU7-90P-201ENST00000459216 62 ntBASIC0.96□□□□□ -2.26
CD48P09326 AC113410.1-201ENST00000505029 247 ntBASIC0.96□□□□□ -2.26
CD48P09326 RNY4P20-201ENST00000516678 93 ntBASIC0.96□□□□□ -2.26
CD48P09326 AC036111.3-201ENST00000526389 112 ntBASIC0.96□□□□□ -2.26
CD48P09326 RNU6-1290P-201ENST00000362957 109 ntBASIC0.95□□□□□ -2.26
CD48P09326 RNU6-654P-201ENST00000364373 107 ntBASIC0.95□□□□□ -2.26
CD48P09326 SNORD113.3-201ENST00000364630 78 ntBASIC0.95□□□□□ -2.26
CD48P09326 Y_RNA.563-201ENST00000384707 108 ntBASIC0.95□□□□□ -2.26
CD48P09326 SNORD12C-201ENST00000386307 89 ntBASIC0.95□□□□□ -2.26
CD48P09326 SNORD111-201ENST00000408139 94 ntBASIC0.95□□□□□ -2.26
CD48P09326 MIR548J-201ENST00000408833 112 ntBASIC0.95□□□□□ -2.26
CD48P09326 AC002429.1-201ENST00000437672 148 ntBASIC0.95□□□□□ -2.26
CD48P09326 AC008267.6-201ENST00000441664 139 ntBASIC0.95□□□□□ -2.26
CD48P09326 RNU7-164P-201ENST00000459221 62 ntBASIC0.95□□□□□ -2.26
CD48P09326 AC004812.1-201ENST00000540773 146 ntBASIC0.95□□□□□ -2.26
CD48P09326 uc_338.6-201ENST00000613544 171 ntBASIC0.95□□□□□ -2.26
CD48P09326 AC106800.4-201ENST00000614905 153 ntBASIC0.95□□□□□ -2.26
CD48P09326 Y_RNA.470-201ENST00000384307 117 ntBASIC0.94□□□□□ -2.26
CD48P09326 MIR222-201ENST00000384992 110 ntBASIC0.94□□□□□ -2.26
CD48P09326 AL512326.2-201ENST00000426359 151 ntBASIC0.94□□□□□ -2.26
CD48P09326 RPS23P4-201ENST00000487908 423 ntBASIC0.94□□□□□ -2.26
CD48P09326 RNU6-1061P-201ENST00000516530 99 ntBASIC0.94□□□□□ -2.26
CD48P09326 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.94□□□□□ -2.26
CD48P09326 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
CD48P09326 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CD48P09326 RNU1-124P-201ENST00000363861 145 ntBASIC0.93□□□□□ -2.26
CD48P09326 Y_RNA.299-201ENST00000364973 94 ntBASIC0.93□□□□□ -2.26
CD48P09326 Y_RNA.330-201ENST00000365230 109 ntBASIC0.93□□□□□ -2.26
CD48P09326 Y_RNA.374-201ENST00000365606 101 ntBASIC0.93□□□□□ -2.26
CD48P09326 MIR1263-201ENST00000408324 86 ntBASIC0.93□□□□□ -2.26
CD48P09326 RNA5SP95-201ENST00000410319 137 ntBASIC0.93□□□□□ -2.26
CD48P09326 RNU7-113P-201ENST00000459273 62 ntBASIC0.93□□□□□ -2.26
CD48P09326 RNU6-313P-201ENST00000516317 112 ntBASIC0.93□□□□□ -2.26
CD48P09326 MIR6740-201ENST00000618268 113 ntBASIC0.93□□□□□ -2.26
CD48P09326 AL035470.1-201ENST00000622571 220 ntBASIC0.93□□□□□ -2.26
CD48P09326 MTND5P18-201ENST00000445624 1801 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms