Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-12P-201ENST00000384604 107 ntBASIC1.28□□□□□ -2.2
LDLRP01130 RNU6-41P-201ENST00000384741 107 ntBASIC1.28□□□□□ -2.2
LDLRP01130 MIR548D2-201ENST00000384955 97 ntBASIC1.28□□□□□ -2.2
LDLRP01130 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
LDLRP01130 MIR136-201ENST00000385207 82 ntBASIC1.28□□□□□ -2.2
LDLRP01130 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
LDLRP01130 RNU6-913P-201ENST00000390913 95 ntBASIC1.28□□□□□ -2.2
LDLRP01130 SNORD123-201ENST00000459473 70 ntBASIC1.28□□□□□ -2.2
LDLRP01130 RPL39P34-201ENST00000477141 156 ntBASIC1.28□□□□□ -2.2
LDLRP01130 RNU6-537P-201ENST00000517277 103 ntBASIC1.28□□□□□ -2.2
LDLRP01130 AC004812.1-201ENST00000540773 146 ntBASIC1.28□□□□□ -2.2
LDLRP01130 MIR5009-201ENST00000578736 100 ntBASIC1.28□□□□□ -2.2
LDLRP01130 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.28□□□□□ -2.2
LDLRP01130 MIR4679-1-201ENST00000637619 75 ntBASIC1.28□□□□□ -2.2
LDLRP01130 RNU6-766P-201ENST00000362478 107 ntBASIC1.27□□□□□ -2.21
LDLRP01130 Y_RNA.36-201ENST00000362602 112 ntBASIC1.27□□□□□ -2.21
LDLRP01130 RNU6-640P-201ENST00000363693 105 ntBASIC1.27□□□□□ -2.21
LDLRP01130 Y_RNA.171-201ENST00000363760 102 ntBASIC1.27□□□□□ -2.21
LDLRP01130 Y_RNA.213-201ENST00000364178 111 ntBASIC1.27□□□□□ -2.21
LDLRP01130 RNU6-756P-201ENST00000383997 107 ntBASIC1.27□□□□□ -2.21
LDLRP01130 SNORA51.10-201ENST00000384418 136 ntBASIC1.27□□□□□ -2.21
LDLRP01130 SNORA19.1-201ENST00000410656 129 ntBASIC1.27□□□□□ -2.21
LDLRP01130 AL035398.1-201ENST00000430869 322 ntBASIC1.27□□□□□ -2.21
LDLRP01130 MIR1270-201ENST00000459320 83 ntBASIC1.27□□□□□ -2.21
LDLRP01130 RPL30P7-201ENST00000479312 323 ntBASIC1.27□□□□□ -2.21
LDLRP01130 RNU6-958P-201ENST00000516995 106 ntBASIC1.27□□□□□ -2.21
LDLRP01130 AC068339.1-201ENST00000526965 141 ntBASIC1.27□□□□□ -2.21
LDLRP01130 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
LDLRP01130 Y_RNA.773-201ENST00000607168 90 ntBASIC1.27□□□□□ -2.21
LDLRP01130 MIR6841-201ENST00000637129 72 ntBASIC1.27□□□□□ -2.21
LDLRP01130 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LDLRP01130 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
LDLRP01130 AL589743.1-201ENST00000551932 2712 ntBASIC1.26□□□□□ -2.21
LDLRP01130 Y_RNA.531-201ENST00000384589 121 ntBASIC1.26□□□□□ -2.21
LDLRP01130 RNU6-1319P-201ENST00000390855 104 ntBASIC1.26□□□□□ -2.21
LDLRP01130 RNU6-747P-201ENST00000390928 104 ntBASIC1.26□□□□□ -2.21
LDLRP01130 RNU6-241P-201ENST00000391148 104 ntBASIC1.26□□□□□ -2.21
LDLRP01130 RNU6-177P-201ENST00000411257 104 ntBASIC1.26□□□□□ -2.21
LDLRP01130 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
LDLRP01130 RPS23P4-201ENST00000487908 423 ntBASIC1.26□□□□□ -2.21
LDLRP01130 RNU7-6P-201ENST00000516845 62 ntBASIC1.26□□□□□ -2.21
LDLRP01130 RNU6-1223P-201ENST00000517124 104 ntBASIC1.26□□□□□ -2.21
LDLRP01130 MIR5582-201ENST00000579697 68 ntBASIC1.26□□□□□ -2.21
LDLRP01130 AP001318.4-201ENST00000616637 121 ntBASIC1.26□□□□□ -2.21
LDLRP01130 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.25□□□□□ -2.21
LDLRP01130 SNORA1.2-201ENST00000365189 134 ntBASIC1.25□□□□□ -2.21
LDLRP01130 SNORA51.5-201ENST00000384126 131 ntBASIC1.25□□□□□ -2.21
LDLRP01130 Y_RNA.470-201ENST00000384307 117 ntBASIC1.25□□□□□ -2.21
LDLRP01130 MIR520E-201ENST00000384867 87 ntBASIC1.25□□□□□ -2.21
LDLRP01130 MIR598-201ENST00000384868 97 ntBASIC1.25□□□□□ -2.21
LDLRP01130 MIR590-201ENST00000385008 97 ntBASIC1.25□□□□□ -2.21
LDLRP01130 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.25□□□□□ -2.21
LDLRP01130 RNU7-67P-201ENST00000459003 62 ntBASIC1.25□□□□□ -2.21
LDLRP01130 RNU6-109P-201ENST00000516364 107 ntBASIC1.25□□□□□ -2.21
LDLRP01130 RNU6-184P-201ENST00000516514 107 ntBASIC1.25□□□□□ -2.21
LDLRP01130 SNORA74.3-201ENST00000517108 154 ntBASIC1.25□□□□□ -2.21
LDLRP01130 RNU6-165P-201ENST00000517170 99 ntBASIC1.25□□□□□ -2.21
LDLRP01130 MIR3163-201ENST00000581592 73 ntBASIC1.25□□□□□ -2.21
LDLRP01130 MIR4791-201ENST00000607666 84 ntBASIC1.25□□□□□ -2.21
LDLRP01130 MIR6717-201ENST00000622747 73 ntBASIC1.25□□□□□ -2.21
LDLRP01130 MIR302B-201ENST00000362188 73 ntBASIC1.24□□□□□ -2.21
LDLRP01130 Y_RNA.49-201ENST00000362714 112 ntBASIC1.24□□□□□ -2.21
LDLRP01130 SNORD115-2-201ENST00000362842 82 ntBASIC1.24□□□□□ -2.21
LDLRP01130 SNORD115-20-201ENST00000365099 82 ntBASIC1.24□□□□□ -2.21
LDLRP01130 MIR1302-5-201ENST00000408164 150 ntBASIC1.24□□□□□ -2.21
LDLRP01130 HMGN1P33-201ENST00000432945 451 ntBASIC1.24□□□□□ -2.21
LDLRP01130 AL353813.1-201ENST00000440700 253 ntBASIC1.24□□□□□ -2.21
LDLRP01130 RNU7-73P-201ENST00000458743 63 ntBASIC1.24□□□□□ -2.21
LDLRP01130 AC107297.1-201ENST00000459991 176 ntBASIC1.24□□□□□ -2.21
LDLRP01130 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
LDLRP01130 Y_RNA.677-201ENST00000516401 85 ntBASIC1.24□□□□□ -2.21
LDLRP01130 Y_RNA.694-201ENST00000516677 117 ntBASIC1.24□□□□□ -2.21
LDLRP01130 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
LDLRP01130 AL020996.3-201ENST00000606617 222 ntBASIC1.24□□□□□ -2.21
LDLRP01130 MIR8055-201ENST00000610739 97 ntBASIC1.24□□□□□ -2.21
LDLRP01130 AC243994.1-201ENST00000618627 109 ntBASIC1.24□□□□□ -2.21
LDLRP01130 MIR8065-201ENST00000620577 100 ntBASIC1.24□□□□□ -2.21
LDLRP01130 MIR1255B1-201ENST00000636325 63 ntBASIC1.24□□□□□ -2.21
LDLRP01130 AL162726.3-218ENST00000636401 95 ntBASIC1.24□□□□□ -2.21
LDLRP01130 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
LDLRP01130 SNORA22.1-201ENST00000362701 134 ntBASIC1.23□□□□□ -2.21
LDLRP01130 MIR759-201ENST00000390224 91 ntBASIC1.23□□□□□ -2.21
LDLRP01130 AL022718.1-201ENST00000412004 84 ntBASIC1.23□□□□□ -2.21
LDLRP01130 AC113410.1-201ENST00000505029 247 ntBASIC1.23□□□□□ -2.21
LDLRP01130 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.23□□□□□ -2.21
LDLRP01130 RNU6-904P-201ENST00000516206 101 ntBASIC1.23□□□□□ -2.21
LDLRP01130 SNORD111.1-201ENST00000516421 86 ntBASIC1.23□□□□□ -2.21
LDLRP01130 MIR151B-201ENST00000584249 96 ntBASIC1.23□□□□□ -2.21
LDLRP01130 AL357312.1-201ENST00000603879 298 ntBASIC1.23□□□□□ -2.21
LDLRP01130 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.23□□□□□ -2.21
LDLRP01130 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
LDLRP01130 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.22□□□□□ -2.21
LDLRP01130 SNORD115-19-201ENST00000363098 82 ntBASIC1.22□□□□□ -2.21
LDLRP01130 SNORD115-18-201ENST00000363293 82 ntBASIC1.22□□□□□ -2.21
LDLRP01130 SNORD115-17-201ENST00000364612 82 ntBASIC1.22□□□□□ -2.21
LDLRP01130 Y_RNA.369-201ENST00000365568 117 ntBASIC1.22□□□□□ -2.21
LDLRP01130 MIR488-201ENST00000365739 83 ntBASIC1.22□□□□□ -2.21
LDLRP01130 Y_RNA.430-201ENST00000384081 110 ntBASIC1.22□□□□□ -2.21
LDLRP01130 Y_RNA.537-201ENST00000384626 109 ntBASIC1.22□□□□□ -2.21
LDLRP01130 RNU6-816P-201ENST00000390914 107 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 336.7 ms