Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.66□□□□□ -2.14
RAPGEF3O95398 AP000753.3-201ENST00000604083 169 ntBASIC1.66□□□□□ -2.14
RAPGEF3O95398 SNORA19-201ENST00000384737 128 ntBASIC1.65□□□□□ -2.15
RAPGEF3O95398 MIR193B-201ENST00000384907 83 ntBASIC1.65□□□□□ -2.15
RAPGEF3O95398 AC090844.1-201ENST00000422019 156 ntBASIC1.65□□□□□ -2.15
RAPGEF3O95398 RNU6-772P-201ENST00000516042 105 ntBASIC1.65□□□□□ -2.15
RAPGEF3O95398 RNU6-1061P-201ENST00000516530 99 ntBASIC1.65□□□□□ -2.15
RAPGEF3O95398 IGKV1-22-201ENST00000524313 326 ntBASIC1.65□□□□□ -2.15
RAPGEF3O95398 MIR4264-201ENST00000583520 66 ntBASIC1.65□□□□□ -2.15
RAPGEF3O95398 SNORD115-2-201ENST00000362842 82 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 SNORD115-20-201ENST00000365099 82 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 Y_RNA.346-201ENST00000365385 112 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 Y_RNA.433-201ENST00000384089 102 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 MIRLET7F2-201ENST00000385277 83 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 RNU6-613P-201ENST00000410412 108 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 RNU7-123P-201ENST00000515911 60 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 RNU6-1333P-201ENST00000516162 93 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 RNU2-35P-201ENST00000516446 142 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 RNY4P20-201ENST00000516678 93 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 MIR1273G-201ENST00000577677 100 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 SEPT14P17-201ENST00000617978 177 ntBASIC1.64□□□□□ -2.15
RAPGEF3O95398 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RAPGEF3O95398 MIR377-201ENST00000362145 69 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 SNORA80D-201ENST00000384488 135 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 Y_RNA.531-201ENST00000384589 121 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 RNU6-1168P-201ENST00000390831 104 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 RNU7-107P-201ENST00000459121 61 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 RNU7-113P-201ENST00000459273 62 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 COX6CP6-201ENST00000490840 228 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 AC113410.1-201ENST00000505029 247 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 AC004812.1-201ENST00000540773 146 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 AC025166.1-201ENST00000612411 163 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 MIR6516-201ENST00000630554 81 ntBASIC1.63□□□□□ -2.15
RAPGEF3O95398 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
RAPGEF3O95398 Y_RNA.299-201ENST00000364973 94 ntBASIC1.62□□□□□ -2.15
RAPGEF3O95398 AL591704.2-201ENST00000421658 181 ntBASIC1.62□□□□□ -2.15
RAPGEF3O95398 RNU6-781P-201ENST00000516377 101 ntBASIC1.62□□□□□ -2.15
RAPGEF3O95398 U6.95-201ENST00000636931 70 ntBASIC1.62□□□□□ -2.15
RAPGEF3O95398 MIR3914-2-201ENST00000637339 95 ntBASIC1.62□□□□□ -2.15
RAPGEF3O95398 RNU6-1081P-201ENST00000384537 107 ntBASIC1.61□□□□□ -2.15
RAPGEF3O95398 Y_RNA.563-201ENST00000384707 108 ntBASIC1.61□□□□□ -2.15
RAPGEF3O95398 MIR759-201ENST00000390224 91 ntBASIC1.61□□□□□ -2.15
RAPGEF3O95398 SNORD12-201ENST00000391002 90 ntBASIC1.61□□□□□ -2.15
RAPGEF3O95398 MIR1263-201ENST00000408324 86 ntBASIC1.61□□□□□ -2.15
RAPGEF3O95398 SNORA70.22-201ENST00000517160 124 ntBASIC1.61□□□□□ -2.15
RAPGEF3O95398 AL365222.1-201ENST00000614661 98 ntBASIC1.61□□□□□ -2.15
RAPGEF3O95398 Y_RNA.198-201ENST00000364013 98 ntBASIC1.6□□□□□ -2.15
RAPGEF3O95398 SNORA25.8-201ENST00000364831 128 ntBASIC1.6□□□□□ -2.15
RAPGEF3O95398 RNU6-910P-201ENST00000390844 107 ntBASIC1.6□□□□□ -2.15
RAPGEF3O95398 RNU2-51P-201ENST00000410708 197 ntBASIC1.6□□□□□ -2.15
RAPGEF3O95398 AL512326.2-201ENST00000426359 151 ntBASIC1.6□□□□□ -2.15
RAPGEF3O95398 AC244023.1-201ENST00000426884 112 ntBASIC1.6□□□□□ -2.15
RAPGEF3O95398 RNU6-313P-201ENST00000516317 112 ntBASIC1.6□□□□□ -2.15
RAPGEF3O95398 AC242498.1-201ENST00000604134 111 ntBASIC1.6□□□□□ -2.15
RAPGEF3O95398 SNORD114-21-201ENST00000606412 72 ntBASIC1.6□□□□□ -2.15
RAPGEF3O95398 Y_RNA.171-201ENST00000363760 102 ntBASIC1.59□□□□□ -2.15
RAPGEF3O95398 Y_RNA.213-201ENST00000364178 111 ntBASIC1.59□□□□□ -2.15
RAPGEF3O95398 Y_RNA.363-201ENST00000365529 113 ntBASIC1.59□□□□□ -2.15
RAPGEF3O95398 SNORD26-201ENST00000384147 75 ntBASIC1.59□□□□□ -2.15
RAPGEF3O95398 Y_RNA.528-201ENST00000384575 108 ntBASIC1.59□□□□□ -2.15
RAPGEF3O95398 RNU6-1154P-201ENST00000391001 104 ntBASIC1.59□□□□□ -2.15
RAPGEF3O95398 SNORD79.1-201ENST00000516069 84 ntBASIC1.59□□□□□ -2.15
RAPGEF3O95398 RNU6-1258P-201ENST00000516911 111 ntBASIC1.59□□□□□ -2.15
RAPGEF3O95398 Y_RNA.115-201ENST00000363272 98 ntBASIC1.58□□□□□ -2.16
RAPGEF3O95398 RNU6-580P-201ENST00000365159 107 ntBASIC1.58□□□□□ -2.16
RAPGEF3O95398 SNORA75.2-201ENST00000391138 150 ntBASIC1.58□□□□□ -2.16
RAPGEF3O95398 SNORA75.3-201ENST00000391231 150 ntBASIC1.58□□□□□ -2.16
RAPGEF3O95398 MIR548I2-201ENST00000408348 149 ntBASIC1.58□□□□□ -2.16
RAPGEF3O95398 snoU13.2-201ENST00000459201 104 ntBASIC1.58□□□□□ -2.16
RAPGEF3O95398 RNU7-21P-201ENST00000459430 62 ntBASIC1.58□□□□□ -2.16
RAPGEF3O95398 AL590095.2-201ENST00000604136 117 ntBASIC1.58□□□□□ -2.16
RAPGEF3O95398 MTND5P18-201ENST00000445624 1801 ntBASIC1.57□□□□□ -2.16
RAPGEF3O95398 Y_RNA.168-201ENST00000363740 102 ntBASIC1.57□□□□□ -2.16
RAPGEF3O95398 Y_RNA.261-201ENST00000364631 102 ntBASIC1.57□□□□□ -2.16
RAPGEF3O95398 RNA5SP205-201ENST00000364653 136 ntBASIC1.57□□□□□ -2.16
RAPGEF3O95398 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.57□□□□□ -2.16
RAPGEF3O95398 MRPL35P3-201ENST00000421557 364 ntBASIC1.57□□□□□ -2.16
RAPGEF3O95398 RNA5SP33-201ENST00000516687 98 ntBASIC1.57□□□□□ -2.16
RAPGEF3O95398 Y_RNA.330-201ENST00000365230 109 ntBASIC1.56□□□□□ -2.16
RAPGEF3O95398 SNORD12C-201ENST00000386307 89 ntBASIC1.56□□□□□ -2.16
RAPGEF3O95398 RNU7-90P-201ENST00000459216 62 ntBASIC1.56□□□□□ -2.16
RAPGEF3O95398 AC019288.1-201ENST00000557918 224 ntBASIC1.56□□□□□ -2.16
RAPGEF3O95398 AL359881.1-201ENST00000602916 267 ntBASIC1.56□□□□□ -2.16
RAPGEF3O95398 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
RAPGEF3O95398 MIR26B-201ENST00000362251 77 ntBASIC1.55□□□□□ -2.16
RAPGEF3O95398 RNU6-654P-201ENST00000364373 107 ntBASIC1.55□□□□□ -2.16
RAPGEF3O95398 SNORA25-201ENST00000384384 134 ntBASIC1.55□□□□□ -2.16
RAPGEF3O95398 MIR588-201ENST00000384900 83 ntBASIC1.55□□□□□ -2.16
RAPGEF3O95398 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
RAPGEF3O95398 RNU4-69P-201ENST00000410677 143 ntBASIC1.55□□□□□ -2.16
RAPGEF3O95398 Y_RNA.630-201ENST00000411370 108 ntBASIC1.55□□□□□ -2.16
RAPGEF3O95398 MIR548AI-201ENST00000579940 88 ntBASIC1.55□□□□□ -2.16
RAPGEF3O95398 MIR3163-201ENST00000581592 73 ntBASIC1.55□□□□□ -2.16
RAPGEF3O95398 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RAPGEF3O95398 RNU6-834P-201ENST00000362367 110 ntBASIC1.54□□□□□ -2.16
RAPGEF3O95398 SNORD113.3-201ENST00000364630 78 ntBASIC1.54□□□□□ -2.16
RAPGEF3O95398 Y_RNA.470-201ENST00000384307 117 ntBASIC1.54□□□□□ -2.16
RAPGEF3O95398 Y_RNA.525-201ENST00000384570 113 ntBASIC1.54□□□□□ -2.16
RAPGEF3O95398 SNORA22C-201ENST00000384614 134 ntBASIC1.54□□□□□ -2.16
RAPGEF3O95398 MIR150-201ENST00000385048 84 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms