Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNA5SP62-201ENST00000363457 110 ntBASIC0.63□□□□□ -2.31
RTN3O95197 Y_RNA.144-201ENST00000363521 113 ntBASIC0.63□□□□□ -2.31
RTN3O95197 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
RTN3O95197 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
RTN3O95197 RNU6-574P-201ENST00000384265 107 ntBASIC0.63□□□□□ -2.31
RTN3O95197 Y_RNA.521-201ENST00000384560 114 ntBASIC0.63□□□□□ -2.31
RTN3O95197 RNU7-102P-201ENST00000458948 62 ntBASIC0.63□□□□□ -2.31
RTN3O95197 RNU7-156P-201ENST00000517214 74 ntBASIC0.63□□□□□ -2.31
RTN3O95197 MIR4431-201ENST00000579990 94 ntBASIC0.63□□□□□ -2.31
RTN3O95197 AC090897.1-201ENST00000580909 226 ntBASIC0.63□□□□□ -2.31
RTN3O95197 AL162730.1-201ENST00000605734 292 ntBASIC0.63□□□□□ -2.31
RTN3O95197 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
RTN3O95197 MIR330-201ENST00000362196 94 ntBASIC0.62□□□□□ -2.31
RTN3O95197 MIR18A-201ENST00000362310 71 ntBASIC0.62□□□□□ -2.31
RTN3O95197 RNU6-1020P-201ENST00000363684 107 ntBASIC0.62□□□□□ -2.31
RTN3O95197 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
RTN3O95197 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RTN3O95197 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
RTN3O95197 Y_RNA.489-201ENST00000384410 101 ntBASIC0.61□□□□□ -2.31
RTN3O95197 RNU6-1237P-201ENST00000384777 107 ntBASIC0.61□□□□□ -2.31
RTN3O95197 SNORD100-201ENST00000408573 76 ntBASIC0.61□□□□□ -2.31
RTN3O95197 MIR1197-201ENST00000408818 88 ntBASIC0.61□□□□□ -2.31
RTN3O95197 AC008608.1-201ENST00000603910 127 ntBASIC0.61□□□□□ -2.31
RTN3O95197 AC009779.6-201ENST00000603972 165 ntBASIC0.61□□□□□ -2.31
RTN3O95197 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
RTN3O95197 AL589743.1-201ENST00000551932 2712 ntBASIC0.6□□□□□ -2.31
RTN3O95197 RNY1P8-201ENST00000383970 114 ntBASIC0.6□□□□□ -2.31
RTN3O95197 SNORD93-201ENST00000408813 74 ntBASIC0.6□□□□□ -2.31
RTN3O95197 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.6□□□□□ -2.31
RTN3O95197 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
RTN3O95197 MTND5P32-201ENST00000560711 1802 ntBASIC0.59□□□□□ -2.31
RTN3O95197 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
RTN3O95197 AL078595.1-201ENST00000404458 226 ntBASIC0.59□□□□□ -2.31
RTN3O95197 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.59□□□□□ -2.31
RTN3O95197 AC107027.2-201ENST00000512197 115 ntBASIC0.59□□□□□ -2.31
RTN3O95197 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
RTN3O95197 RNU6-312P-201ENST00000364629 107 ntBASIC0.58□□□□□ -2.32
RTN3O95197 RNU4-16P-201ENST00000364737 141 ntBASIC0.58□□□□□ -2.32
RTN3O95197 RNY1P6-201ENST00000384193 109 ntBASIC0.58□□□□□ -2.32
RTN3O95197 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.58□□□□□ -2.32
RTN3O95197 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
RTN3O95197 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
RTN3O95197 AC002350.1-201ENST00000490759 375 ntBASIC0.58□□□□□ -2.32
RTN3O95197 RN7SKP12-201ENST00000516275 143 ntBASIC0.58□□□□□ -2.32
RTN3O95197 RNA5SP395-201ENST00000516567 118 ntBASIC0.58□□□□□ -2.32
RTN3O95197 RNA5SP476-201ENST00000516613 103 ntBASIC0.58□□□□□ -2.32
RTN3O95197 AC141846.1-201ENST00000568348 142 ntBASIC0.58□□□□□ -2.32
RTN3O95197 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.58□□□□□ -2.32
RTN3O95197 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
RTN3O95197 RNU6-47P-201ENST00000383866 107 ntBASIC0.57□□□□□ -2.32
RTN3O95197 RNU4-83P-201ENST00000410863 133 ntBASIC0.57□□□□□ -2.32
RTN3O95197 RNU6-448P-201ENST00000517052 107 ntBASIC0.57□□□□□ -2.32
RTN3O95197 Y_RNA.52-201ENST00000362760 96 ntBASIC0.56□□□□□ -2.32
RTN3O95197 Y_RNA.233-201ENST00000364407 101 ntBASIC0.55□□□□□ -2.32
RTN3O95197 Y_RNA.337-201ENST00000365312 102 ntBASIC0.55□□□□□ -2.32
RTN3O95197 RNU6-1336P-201ENST00000383886 109 ntBASIC0.55□□□□□ -2.32
RTN3O95197 SNORA18-201ENST00000384416 132 ntBASIC0.55□□□□□ -2.32
RTN3O95197 RNU6-768P-201ENST00000384683 107 ntBASIC0.55□□□□□ -2.32
RTN3O95197 RNU5E-9P-201ENST00000411164 104 ntBASIC0.55□□□□□ -2.32
RTN3O95197 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
RTN3O95197 AC130289.1-201ENST00000577321 73 ntBASIC0.55□□□□□ -2.32
RTN3O95197 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.55□□□□□ -2.32
RTN3O95197 MIR2909-201ENST00000617113 69 ntBASIC0.55□□□□□ -2.32
RTN3O95197 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
RTN3O95197 RNA5SP117-201ENST00000365294 118 ntBASIC0.54□□□□□ -2.32
RTN3O95197 RNU6-949P-201ENST00000384040 107 ntBASIC0.54□□□□□ -2.32
RTN3O95197 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
RTN3O95197 Y_RNA.757-201ENST00000578934 114 ntBASIC0.54□□□□□ -2.32
RTN3O95197 MIR8066-201ENST00000617280 78 ntBASIC0.54□□□□□ -2.32
RTN3O95197 Y_RNA.42-201ENST00000362660 108 ntBASIC0.53□□□□□ -2.32
RTN3O95197 RNU6-818P-201ENST00000364837 108 ntBASIC0.53□□□□□ -2.32
RTN3O95197 U8.15-201ENST00000390947 134 ntBASIC0.53□□□□□ -2.32
RTN3O95197 AP003327.1-201ENST00000529684 127 ntBASIC0.53□□□□□ -2.32
RTN3O95197 AC092634.7-201ENST00000621022 103 ntBASIC0.53□□□□□ -2.32
RTN3O95197 SNORA75.5-201ENST00000391291 81 ntBASIC0.52□□□□□ -2.33
RTN3O95197 RNU6-1086P-201ENST00000410930 100 ntBASIC0.52□□□□□ -2.33
RTN3O95197 RNU6-1219P-201ENST00000516143 112 ntBASIC0.52□□□□□ -2.33
RTN3O95197 AC072026.1-201ENST00000605023 201 ntBASIC0.52□□□□□ -2.33
RTN3O95197 RNU6-349P-201ENST00000362402 107 ntBASIC0.51□□□□□ -2.33
RTN3O95197 RNU6-403P-201ENST00000363163 104 ntBASIC0.51□□□□□ -2.33
RTN3O95197 RNU6-1082P-201ENST00000364574 107 ntBASIC0.51□□□□□ -2.33
RTN3O95197 Y_RNA.274-201ENST00000364714 101 ntBASIC0.51□□□□□ -2.33
RTN3O95197 Y_RNA.401-201ENST00000383965 117 ntBASIC0.51□□□□□ -2.33
RTN3O95197 RNU6-679P-201ENST00000391003 106 ntBASIC0.51□□□□□ -2.33
RTN3O95197 RNA5SP144-201ENST00000410846 116 ntBASIC0.51□□□□□ -2.33
RTN3O95197 RNA5SP236-201ENST00000516169 116 ntBASIC0.51□□□□□ -2.33
RTN3O95197 AC141273.2-201ENST00000618989 130 ntBASIC0.51□□□□□ -2.33
RTN3O95197 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
RTN3O95197 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
RTN3O95197 Y_RNA.188-201ENST00000363952 111 ntBASIC0.5□□□□□ -2.33
RTN3O95197 Y_RNA.357-201ENST00000365487 109 ntBASIC0.5□□□□□ -2.33
RTN3O95197 AL022718.1-201ENST00000412004 84 ntBASIC0.5□□□□□ -2.33
RTN3O95197 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
RTN3O95197 Y_RNA.644-201ENST00000459006 113 ntBASIC0.5□□□□□ -2.33
RTN3O95197 HAR1A.1-201ENST00000459583 118 ntBASIC0.5□□□□□ -2.33
RTN3O95197 Y_RNA.674-201ENST00000516362 113 ntBASIC0.5□□□□□ -2.33
RTN3O95197 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
RTN3O95197 MIR6082-201ENST00000613604 109 ntBASIC0.5□□□□□ -2.33
RTN3O95197 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.5□□□□□ -2.33
RTN3O95197 uc_338.16-201ENST00000621804 95 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms